2024-03-29 14:31:51, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_022135 1667 bp mRNA linear PRI 17-APR-2013 DEFINITION Homo sapiens popeye domain containing 2 (POPDC2), mRNA. ACCESSION NM_022135 VERSION NM_022135.2 GI:22209003 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1667) AUTHORS Lamesch,P., Li,N., Milstein,S., Fan,C., Hao,T., Szabo,G., Hu,Z., Venkatesan,K., Bethel,G., Martin,P., Rogers,J., Lawlor,S., McLaren,S., Dricot,A., Borick,H., Cusick,M.E., Vandenhaute,J., Dunham,I., Hill,D.E. and Vidal,M. TITLE hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes JOURNAL Genomics 89 (3), 307-315 (2007) PUBMED 17207965 REFERENCE 2 (bases 1 to 1667) AUTHORS Andree,B., Hillemann,T., Kessler-Icekson,G., Schmitt-John,T., Jockusch,H., Arnold,H.H. and Brand,T. TITLE Isolation and characterization of the novel popeye gene family expressed in skeletal muscle and heart JOURNAL Dev. Biol. 223 (2), 371-382 (2000) PUBMED 10882522 COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AF204173.1. On Aug 12, 2002 this sequence version replaced gi:11545868. Summary: This gene encodes a member of the POP family of proteins which contain three putative transmembrane domains. This membrane associated protein is predominantly expressed in skeletal and cardiac muscle, and may have an important function in these tissues. [provided by RefSeq, Jul 2008]. ##Evidence-Data-START## Transcript exon combination :: AF204173.1, BC044929.1 [ECO:0000332] RNAseq introns :: single sample supports all introns ERS025081, ERS025083 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. FEATURES Location/Qualifiers source 1..1667 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="3" /map="3q13.33" gene 1..1667 /gene="POPDC2" /gene_synonym="POP2" /note="popeye domain containing 2" /db_xref="GeneID:64091" /db_xref="HGNC:17648" /db_xref="HPRD:16160" /db_xref="MIM:605823" exon 1..625 /gene="POPDC2" /gene_synonym="POP2" /inference="alignment:Splign:1.39.8" misc_feature 120..122 /gene="POPDC2" /gene_synonym="POP2" /note="upstream in-frame stop codon" CDS 135..1229 /gene="POPDC2" /gene_synonym="POP2" /note="popeye protein 2" /codon_start=1 /product="popeye domain-containing protein 2" /protein_id="NP_071418.2" /db_xref="GI:22209004" /db_xref="CCDS:CCDS2992.1" /db_xref="GeneID:64091" /db_xref="HGNC:17648" /db_xref="HPRD:16160" /db_xref="MIM:605823" /translation="
MSANSSRVGQLLLQGSACIRWKQDVEGAVYHLANCLLLLGFMGGSGVYGCFYLFGFLSAGYLCCVLWGWFSACGLDIVLWSFLLAVVCLLQLAHLVYRLREDTLPEEFDLLYKTLCLPLQVPLQTYKEIVHCCEEQVLTLATEQTYAVEGETPINRLSLLLSGRVRVSQDGQFLHYIFPYQFMDSPEWESLQPSEEGVFQVTLTAETSCSYISWPRKSLHLLLTKERYISCLFSALLGYDISEKLYTLNDKLFAKFGLRFDIRLPSLYHVLGPTAADAGPESEKGDEEVCEPAVSPPQATPTSLQQTPPCSTPPATTNFPAPPTRARLSRPDSGILASRIPLQSYSQVISRGQAPLAPTHTPEL
" misc_feature 243..305 /gene="POPDC2" /gene_synonym="POP2" /inference="non-experimental evidence, no additional details recorded" /note="propagated from UniProtKB/Swiss-Prot (Q9HBU9.2); transmembrane region" misc_feature 363..425 /gene="POPDC2" /gene_synonym="POP2" /inference="non-experimental evidence, no additional details recorded" /note="propagated from UniProtKB/Swiss-Prot (Q9HBU9.2); transmembrane region" misc_feature 453..914 /gene="POPDC2" /gene_synonym="POP2" /note="Popeye protein conserved region; Region: Popeye; pfam04831" /db_xref="CDD:203101" variation 598 /gene="POPDC2" /gene_synonym="POP2" /replace="a" /replace="c" /db_xref="dbSNP:199588679" exon 626..734 /gene="POPDC2" /gene_synonym="POP2" /inference="alignment:Splign:1.39.8" exon 735..1143 /gene="POPDC2" /gene_synonym="POP2" /inference="alignment:Splign:1.39.8" variation 1122 /gene="POPDC2" /gene_synonym="POP2" /replace="a" /replace="c" /db_xref="dbSNP:34156828" exon 1144..1644 /gene="POPDC2" /gene_synonym="POP2" /inference="alignment:Splign:1.39.8" STS 1440..1563 /gene="POPDC2" /gene_synonym="POP2" /standard_name="SHGC-77235" /db_xref="UniSTS:22566" polyA_signal 1628..1633 /gene="POPDC2" /gene_synonym="POP2" ORIGIN
cttctaggaaaggtggagtcggtagtgagaagccggaggtgagaagacccctgagcggatggattcattcattttctgaatttcctatgtgaggacagtattagagcccagtgaggctttgagaggccccaaagatgagcgccaacagcagcagagtgggccagcttctcttgcagggttcagcgtgcattaggtggaagcaggatgtggaaggggctgtctaccacctagccaactgcctcttactcctgggcttcatggggggcagtggggtgtatggatgcttctatctttttggcttcctgagtgcaggttacctgtgctgcgtgctgtggggctggttcagtgcctgtggcctggacattgttctttggagcttcctgctggctgtggtctgcctgctccagctggcacacctggtataccgcctgcgtgaggacaccctccctgaggagtttgacctcctctacaagacgctgtgcctgcccttgcaggtgcccctacagacatacaaggagattgttcactgctgcgaggagcaggtcttaactctggccactgaacagacctatgctgtggagggtgagacacccatcaaccgcctgtccctgctgctctctggccgggttcgtgtgagccaggatgggcagtttctgcactacatctttccataccagttcatggactctcctgagtgggaatcactacagccttctgaggagggggtgttccaggtcactctgactgctgagacctcatgtagctacatttcctggccccggaaaagtctccatcttcttctgaccaaagagcgatacatctcctgcctcttctcggctctgctgggatatgacatctcagagaagctctacactctcaatgacaagctctttgctaagtttgggctgcgctttgacatccgccttcccagcctctaccatgtcctgggtcccactgctgcagatgctggaccagagtccgagaagggtgatgaggaagtctgtgagccagctgtgtcccctcctcaggccacacccacctctctccagcaaacacccccttgttctacccctccagctaccaccaactttcctgcacctcctacccgggccaggttgtccaggccagacagtggcatactggcttctagaattcctctccagagctactctcaagttatatccaggggacaggcccctttggctccaacccacacgcctgaactttaaggatcattggactatcttctctgtggccagcgcagctctcttctgtgttcacagaatggccactgataggcatgcctcttttcccacccactggaaggctcacaggcaaggtgagagaggacacagaaggtgccaacactgtcgctacagtaaggacctgaagtgactttgagaaattcaccctcacaaaccttccttcaggagcaggcattggtagtgcagaggcacagattccgtcctttaccagctgcagaatcttgggcaagttacatagcctctgtgagcctcatcggtaaacagtgggggttatgaaacccacctcacagggttgttgtgaggatccaatgagttgatttaggtaagcacctagcacatgccgtggcaccaagtaagcactcaataaatcactcaactcttaaaaaaaaaaaaaaaaaaaaa
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ANNOTATIONS from NCBI Entrez Gene (20130726): GeneID:64091 -> Molecular function: GO:0003674 [molecular_function] evidence: ND GeneID:64091 -> Biological process: GO:0008150 [biological_process] evidence: ND GeneID:64091 -> Cellular component: GO:0016021 [integral to membrane] evidence: NAS
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