2024-03-29 20:08:55, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_022063 2766 bp mRNA linear PRI 17-APR-2013 DEFINITION Homo sapiens family with sequence similarity 204, member A (FAM204A), transcript variant 1, mRNA. ACCESSION NM_022063 VERSION NM_022063.2 GI:197927280 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2766) AUTHORS Lamesch,P., Li,N., Milstein,S., Fan,C., Hao,T., Szabo,G., Hu,Z., Venkatesan,K., Bethel,G., Martin,P., Rogers,J., Lawlor,S., McLaren,S., Dricot,A., Borick,H., Cusick,M.E., Vandenhaute,J., Dunham,I., Hill,D.E. and Vidal,M. TITLE hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes JOURNAL Genomics 89 (3), 307-315 (2007) PUBMED 17207965 REFERENCE 2 (bases 1 to 2766) AUTHORS Grupe,A., Li,Y., Rowland,C., Nowotny,P., Hinrichs,A.L., Smemo,S., Kauwe,J.S., Maxwell,T.J., Cherny,S., Doil,L., Tacey,K., van Luchene,R., Myers,A., Wavrant-De Vrieze,F., Kaleem,M., Hollingworth,P., Jehu,L., Foy,C., Archer,N., Hamilton,G., Holmans,P., Morris,C.M., Catanese,J., Sninsky,J., White,T.J., Powell,J., Hardy,J., O'Donovan,M., Lovestone,S., Jones,L., Morris,J.C., Thal,L., Owen,M., Williams,J. and Goate,A. TITLE A scan of chromosome 10 identifies a novel locus showing strong association with late-onset Alzheimer disease JOURNAL Am. J. Hum. Genet. 78 (1), 78-88 (2006) PUBMED 16385451 REMARK GeneRIF: Observational study of gene-disease association. (HuGE Navigator) REFERENCE 3 (bases 1 to 2766) AUTHORS Oh,J.H., Yang,J.O., Hahn,Y., Kim,M.R., Byun,S.S., Jeon,Y.J., Kim,J.M., Song,K.S., Noh,S.M., Kim,S., Yoo,H.S., Kim,Y.S. and Kim,N.S. TITLE Transcriptome analysis of human gastric cancer JOURNAL Mamm. Genome 16 (12), 942-954 (2005) PUBMED 16341674 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DA168924.1, BC023577.2 and AL365498.21. On Sep 4, 2008 this sequence version replaced gi:11545770. Transcript Variant: This variant (1) represents the longer transcript. Sequence Note: The RefSeq transcript and protein were derived from transcript and genomic sequence to make the sequence consistent with the reference genome assembly. The extent of this transcript is supported by transript alignments. ##Evidence-Data-START## Transcript exon combination :: AK023250.1, AK026630.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support ERS025081, ERS025082 [ECO:0000350] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-17 DA168924.1 5-21 18-1106 BC023577.2 1-1089 1107-2766 AL365498.21 35892-37551 c FEATURES Location/Qualifiers source 1..2766 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="10" /map="10q26.11" gene 1..2766 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /note="family with sequence similarity 204, member A" /db_xref="GeneID:63877" /db_xref="HGNC:25794" /db_xref="HPRD:12593" misc_feature <1..>1660 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /note="annotated region of clone" exon 1..58 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /inference="alignment:Splign:1.39.8" exon 59..259 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /inference="alignment:Splign:1.39.8" misc_feature 259..261 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /note="upstream in-frame stop codon" exon 260..501 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /inference="alignment:Splign:1.39.8" CDS 268..969 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /codon_start=1 /product="protein FAM204A" /protein_id="NP_071346.1" /db_xref="GI:11545771" /db_xref="CCDS:CCDS7605.1" /db_xref="GeneID:63877" /db_xref="HGNC:25794" /db_xref="HPRD:12593" /translation="
MWSGLLPPGLNESDAESNSEDEATLENSGLNLQEDKEDESIRKTEIIDFSTDEPKTETESNVNAYEECPSGIPIDMWNKFQELHKKHSEQKSTTSRFRGKRRKRSRKDKLKNEKELHSEPSSNETQWKELTQYFGVNDRFDPPVKRKKVEKSGLEKRIDQAVEEWNIEKAEELSNQLATRELGVKIAKAVACHNFVKAKKEVENSQAARKKKKLAWGFEAKKRWETKSNMGYM
" exon 502..589 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /inference="alignment:Splign:1.39.8" exon 590..620 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /inference="alignment:Splign:1.39.8" exon 621..720 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /inference="alignment:Splign:1.39.8" exon 721..810 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /inference="alignment:Splign:1.39.8" exon 811..917 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /inference="alignment:Splign:1.39.8" STS 855..955 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /standard_name="RH143414" /db_xref="UniSTS:232661" STS 868..991 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /standard_name="SHGC-76092" /db_xref="UniSTS:75119" exon 918..2766 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /inference="alignment:Splign:1.39.8" STS 925..1031 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /standard_name="G22405" /db_xref="UniSTS:51049" STS 1018..1110 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /standard_name="RH93408" /db_xref="UniSTS:88554" variation 1320 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /replace="c" /replace="t" /db_xref="dbSNP:201808962" polyA_signal 2028..2033 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" polyA_site 2061 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" STS 2080..2261 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /standard_name="SHGC-52428" /db_xref="UniSTS:7398" STS 2083..2358 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /standard_name="SHGC-132812" /db_xref="UniSTS:170902" polyA_site 2475 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" ORIGIN
agaaggcgcgatgttgacggggtcctaagatggctgctgggcgaccacttcctgacagctccagttaatgggactgccagcaggctagacatccttcgccggaatgtgcagcgcttagttctgtgcccgggaggggcttctctctcttttgggattggagtgtggcattgccgccagaaagcctgcagaattccgggttgtgcagccaagcaggaacggtgtacctttctagacccatcctcttgcaatcttggaccctaagaaaagatgtggagtgggctgctacctcctggcctaaatgaaagtgacgctgagtcaaactcggaagatgaagctacgttggagaactctggacttaacttacaggaagataaagaggatgagagcatcagaaaaacagaaatcatagatttctcaacagatgaaccaaaaactgaaacagagtcaaatgtaaatgcctatgaagagtgtccttctggaattcccatagatatgtggaataaatttcaagaattgcataaaaaacattctgaacagaaaagcacaacctcaagattcagagggaaaagaagaaaacgctccagaaaagataaattgaagaatgaaaaagaattacatagtgaaccgtcctcaaatgaaacccagtggaaagagcttactcagtattttggagtcaatgatagatttgacccgcctgttaaaaggaaaaaagttgagaagtcaggccttgaaaagaggatagaccaggctgtggaggagtggaatattgagaaggctgaggaactcagcaaccagctagctactcgagagcttggtgtaaaaattgccaaagcagttgcctgccacaactttgtaaaagccaaaaaggaggttgaaaattcacaggctgcccgaaaaaagaagaaacttgcatgggggtttgaagcaaagaagagatgggaaaccaaaagcaacatgggatacatgtaacttgccagagtgcttcaagacatttgtagactcaaatgctcaatttactgagaatgttttcctgcctatgttaatatgtcagaaaattgatagcactaaaacaaaaataagcataaaatttgggattttgattatcagctcttttcagtctttctttaaggactttgtcctattgaagtgaataaaatgaagcattctgttatttgtataagaaatgtaagaaaaaaaatatagaaagaagaggataggattttgtttatttgtatggatggacccttggtataaaatcacttttggcgctttccattcatttggtttagcacagccagtgagcttctcgtactttctttctttttttttttttttttgagacagagcctcgcttgctctgtcacccaggctagagtgcagtagcacgatcttggctcactgcaaccactgcttcctgggttcaagtgattctcatgcctcagcctcctgagtagctgggattatggacaaatgccaccacacccggctaattttttttttttttttgtatttttagtagagacagagttttgctgtgttggtcaggctggtcttgaactcctggcctcatatgattcacctgcctctgcctcccaaagttctgggagtacagacatgagctaccatgctgcccttgtattttcttatctgtacccagtgtaactacacgtttactggaactgtgtttttaagactgacagttgtttataatggattagtcgtaagtaccaaaaagtctcagttgatattatctttacaaatgacttgaccttaatgttataaaagtagttactgtttttttttaattggaggcagacttgatatttcagagttgcatagtaaaagcaatttgttaatttttgtgtactttcagataaactattacaataaagaaaggagcagaatgtagtatttggaagatgatttaaattcagcaacgcctaaaaatgtcttcctaagtatttttctcagccatgtcattctttaaattatgagatggttcttagaagagaaaatggtgtaattgtattaaacagacaattataactcaagataatataactttgaaccttctaagaactgatttgtttggttttcctcccattccccattcctccttaaaagattgaatgaattaatgagcagaaagagaggattggtaacatgggaaatcgttttcattagatgtacatttcctggttctgacaggaaaggggctccagaaaatcataaaacaagcaggtgaacaagaccaggtgtgtcggcacctccctgctcagtgcccagcggaggtaaagaaccactcagcatggtttttgtcagttcacctcttctgtcgttgtcagaggtttcctacctgtctgatataaactttctctgggttgataatataaattcagaaacatgtaaaatgaatcatgattatattactgttatttttagacttaaaatagtaacaaaattttatttatggtggcacatttaatggctttttttttctgtgttctggaataagagaatacctagctactatttaagcatccaaaaatcatatcttgctttcatttagttgagaaaagccagcatagagaaagcaaagttttagaatattatgtgtcatactaattcagtatccagaccaaatgttggaaagtcttattttatgatttaatatcccttgttccattttacagatatgatcatgtaaaacttacctacaatattcatttcaaactgctaaattaggtaaatacagacttttagtat
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