Home |
Help |
Advanced search
2024-04-26 09:37:28, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_020796 6860 bp mRNA linear PRI 17-APR-2013
DEFINITION Homo sapiens sema domain, transmembrane domain (TM), and
cytoplasmic domain, (semaphorin) 6A (SEMA6A), mRNA.
ACCESSION NM_020796
VERSION NM_020796.3 GI:145553983
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6860)
AUTHORS Urbich,C., Kaluza,D., Fromel,T., Knau,A., Bennewitz,K., Boon,R.A.,
Bonauer,A., Doebele,C., Boeckel,J.N., Hergenreider,E., Zeiher,A.M.,
Kroll,J., Fleming,I. and Dimmeler,S.
TITLE MicroRNA-27a/b controls endothelial cell repulsion and angiogenesis
by targeting semaphorin 6A
JOURNAL Blood 119 (6), 1607-1616 (2012)
PUBMED 22184411
REMARK GeneRIF: Data show that miR-27a/b regulated the expression of the
angiogenesis inhibitor semaphorin 6A (SEMA6A) in vitro and in vivo
and targeted the 3'-untranslated region of SEMA6A.
REFERENCE 2 (bases 1 to 6860)
AUTHORS Ramasamy,A., Curjuric,I., Coin,L.J., Kumar,A., McArdle,W.L.,
Imboden,M., Leynaert,B., Kogevinas,M., Schmid-Grendelmeier,P.,
Pekkanen,J., Wjst,M., Bircher,A.J., Sovio,U., Rochat,T.,
Hartikainen,A.L., Balding,D.J., Jarvelin,M.R., Probst-Hensch,N.,
Strachan,D.P. and Jarvis,D.L.
TITLE A genome-wide meta-analysis of genetic variants associated with
allergic rhinitis and grass sensitization and their interaction
with birth order
JOURNAL J. Allergy Clin. Immunol. 128 (5), 996-1005 (2011)
PUBMED 22036096
REFERENCE 3 (bases 1 to 6860)
AUTHORS Johnson,M.P., Roten,L.T., Dyer,T.D., East,C.E., Forsmo,S.,
Blangero,J., Brennecke,S.P., Austgulen,R. and Moses,E.K.
TITLE The ERAP2 gene is associated with preeclampsia in Australian and
Norwegian populations
JOURNAL Hum. Genet. 126 (5), 655-666 (2009)
PUBMED 19578876
REMARK GeneRIF: Observational study of gene-disease association. (HuGE
Navigator)
REFERENCE 4 (bases 1 to 6860)
AUTHORS Landers,J.E., Melki,J., Meininger,V., Glass,J.D., van den
Berg,L.H., van Es,M.A., Sapp,P.C., van Vught,P.W.,
McKenna-Yasek,D.M., Blauw,H.M., Cho,T.J., Polak,M., Shi,L.,
Wills,A.M., Broom,W.J., Ticozzi,N., Silani,V., Ozoguz,A.,
Rodriguez-Leyva,I., Veldink,J.H., Ivinson,A.J., Saris,C.G.,
Hosler,B.A., Barnes-Nessa,A., Couture,N., Wokke,J.H.,
Kwiatkowski,T.J. Jr., Ophoff,R.A., Cronin,S., Hardiman,O.,
Diekstra,F.P., Leigh,P.N., Shaw,C.E., Simpson,C.L., Hansen,V.K.,
Powell,J.F., Corcia,P., Salachas,F., Heath,S., Galan,P.,
Georges,F., Horvitz,H.R., Lathrop,M., Purcell,S., Al-Chalabi,A. and
Brown,R.H. Jr.
TITLE Reduced expression of the Kinesin-Associated Protein 3 (KIFAP3)
gene increases survival in sporadic amyotrophic lateral sclerosis
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 106 (22), 9004-9009 (2009)
PUBMED 19451621
REFERENCE 5 (bases 1 to 6860)
AUTHORS Prislei,S., Mozzetti,S., Filippetti,F., De Donato,M., Raspaglio,G.,
Cicchillitti,L., Scambia,G. and Ferlini,C.
TITLE From plasma membrane to cytoskeleton: a novel function for
semaphorin 6A
JOURNAL Mol. Cancer Ther. 7 (1), 233-241 (2008)
PUBMED 18187809
REMARK GeneRIF: findings suggest for SEMA6A a novel function in the
cytoskeleton and a role in modulating tubulin isotype composition
and microtubule dynamics
REFERENCE 6 (bases 1 to 6860)
AUTHORS Gautier,G., de Saint-Vis,B., Senechal,B., Pin,J.J., Bates,E.E.,
Caux,C., Geissmann,F. and Garrone,P.
TITLE The class 6 semaphorin SEMA6A is induced by interferon-gamma and
defines an activation status of langerhans cells observed in
pathological situations
JOURNAL Am. J. Pathol. 168 (2), 453-465 (2006)
PUBMED 16436660
REMARK GeneRIF: Strong expression of SEMA6A is associated with langerhans
cells of histiocytosis or dermatopathic lymphadenitis
REFERENCE 7 (bases 1 to 6860)
AUTHORS Nakayama,M., Kikuno,R. and Ohara,O.
TITLE Protein-protein interactions between large proteins: two-hybrid
screening using a functionally classified library composed of long
cDNAs
JOURNAL Genome Res. 12 (11), 1773-1784 (2002)
PUBMED 12421765
REFERENCE 8 (bases 1 to 6860)
AUTHORS Leighton,P.A., Mitchell,K.J., Goodrich,L.V., Lu,X., Pinson,K.,
Scherz,P., Skarnes,W.C. and Tessier-Lavigne,M.
TITLE Defining brain wiring patterns and mechanisms through gene trapping
in mice
JOURNAL Nature 410 (6825), 174-179 (2001)
PUBMED 11242070
REFERENCE 9 (bases 1 to 6860)
AUTHORS Klostermann,A., Lutz,B., Gertler,F. and Behl,C.
TITLE The orthologous human and murine semaphorin 6A-1 proteins
(SEMA6A-1/Sema6A-1) bind to the enabled/vasodilator-stimulated
phosphoprotein-like protein (EVL) via a novel carboxyl-terminal
zyxin-like domain
JOURNAL J. Biol. Chem. 275 (50), 39647-39653 (2000)
PUBMED 10993894
REFERENCE 10 (bases 1 to 6860)
AUTHORS Zhou,L., White,F.A., Lentz,S.I., Wright,D.E., Fisher,D.A. and
Snider,W.D.
TITLE Cloning and expression of a novel murine semaphorin with structural
similarity to insect semaphorin I
JOURNAL Mol. Cell. Neurosci. 9 (1), 26-41 (1997)
PUBMED 9204478
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
CX164544.1, BC032619.1 and AC010296.6.
On Apr 20, 2007 this sequence version replaced gi:47132510.
Summary: The transmembrane semaphorin SEMA6A is expressed in
developing neural tissue and is required for proper development of
the thalamocortical projection (Leighton et al., 2001 [PubMed
11242070]).[supplied by OMIM, Feb 2011].
Sequence Note: This RefSeq record was created from transcript and
genomic sequence data because no single transcript was available
for the full length of the gene. The extent of this transcript is
supported by transcript alignments.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: BC032619.1, AF279656.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
ERS025082, ERS025084 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-668 CX164544.1 1-668
669-3617 BC032619.1 751-3699
3618-6860 AC010296.6 95507-98749 c
FEATURES Location/Qualifiers
source 1..6860
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="5"
/map="5q23.1"
gene 1..6860
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/note="sema domain, transmembrane domain (TM), and
cytoplasmic domain, (semaphorin) 6A"
/db_xref="GeneID:57556"
/db_xref="HGNC:10738"
/db_xref="HPRD:06906"
/db_xref="MIM:605885"
exon 1..671
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="alignment:Splign:1.39.8"
STS 454..639
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/standard_name="SEMA6A"
/db_xref="UniSTS:504925"
exon 672..809
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="alignment:Splign:1.39.8"
misc_feature 701..703
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/note="upstream in-frame stop codon"
CDS 710..3802
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/note="semaphorin 6A-1; semaphorin-6A; sema VIa; SEMA6A-1;
semaphorin VIA; semaphorin-6A-1"
/codon_start=1
/product="semaphorin-6A precursor"
/protein_id="NP_065847.1"
/db_xref="GI:11991660"
/db_xref="CCDS:CCDS47256.1"
/db_xref="GeneID:57556"
/db_xref="HGNC:10738"
/db_xref="HPRD:06906"
/db_xref="MIM:605885"
/translation="
MRSEALLLYFTLLHFAGAGFPEDSEPISISHGNYTKQYPVFVGHKPGRNTTQRHRLDIQMIMIMNGTLYIAARDHIYTVDIDTSHTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNFIKVLLKKNDDALFVCGTNAFNPSCRNYKMDTLEPFGDEFSGMARCPYDAKHANVALFADGKLYSATVTDFLAIDAVIYRSLGESPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIAVEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVTDVIRINGRDVVLATFSTPYNSIPGSAVCAYDMLDIASVFTGRFKEQKSPDSTWTPVPDERVPKPRPGCCAGSSSLERYATSNEFPDDTLNFIKTHPLMDEAVPSIFNRPWFLRTMVRYRLTKIAVDTAAGPYQNHTVVFLGSEKGIILKFLARIGNSGFLNDSLFLEEMSVYNSEKCSYDGVEDKRIMGMQLDRASSSLYVAFSTCVIKVPLGRCERHGKCKKTCIASRDPYCGWIKEGGACSHLSPNSRLTFEQDIERGNTDGLGDCHNSFVALNGHSSSLLPSTTTSDSTAQEGYESRGGMLDWKHLLDSPDSTDPLGAVSSHNHQDKKGVIRESYLKGHDQLVPVTLLAIAVILAFVMGAVFSGITVYCVCDHRRKDVAVVQRKEKELTHSRRGSMSSVTKLSGLFGDTQSKDPKPEAILTPLMHNGKLATPGNTAKMLIKADQHHLDLTALPTPESTPTLQQKRKPSRGSREWERNQNLINACTKDMPPMGSPVIPTDLPLRASPSHIPSVVVLPITQQGYQHEYVDQPKMSEVAQMALEDQAATLEYKTIKEHLSSKSPNHGVNLVENLDSLPPKVPQREASLGPPGASLSQTGLSKRLEMHHSSSYGVDYKRSYPTNSLTRSHQATTLKRNNTNSSNSSHLSRNQSFGRGDNPPPAPQRVDSIQVHSSQPSGQAVTVSRQPSLNAYNSLTRSGLKRTPSLKPDVPPKPSFAPLSTSMKPNDACT
"
sig_peptide 710..763
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="COORDINATES: ab initio prediction:SignalP:4.0"
mat_peptide 764..3799
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/product="Semaphorin-6A"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9H2E6.2)"
misc_feature 851..2248
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/note="The Sema domain, a protein interacting module, of
semaphorins 6A (Sema6A); Region: Sema_6A; cd11266"
/db_xref="CDD:200527"
misc_feature 899..2125
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/note="semaphorin domain; Region: Sema; smart00630"
/db_xref="CDD:197806"
misc_feature order(1031..1042,1193..1198,1271..1273,1277..1282,
1301..1303,1343..1351,1364..1366,1505..1510,1517..1519,
1886..1888)
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/note="plexin binding site [polypeptide binding]; other
site"
/db_xref="CDD:200527"
misc_feature order(1436..1438,1562..1564,1568..1570,1574..1582,
1586..1588,1658..1660,1664..1678,1763..1765,1949..1954,
1958..1960)
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/note="homodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:200527"
misc_feature 2249..>2359
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/note="Plexin repeat; Region: PSI; pfam01437"
/db_xref="CDD:201798"
misc_feature 2657..2719
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q9H2E6.2);
transmembrane region"
misc_feature 2801..2803
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
(Q9H2E6.2); phosphorylation site"
misc_feature 3563..3565
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
(Q9H2E6.2); phosphorylation site"
misc_feature 3671..3673
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
(Q9H2E6.2); phosphorylation site"
variation 743
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/replace="c"
/replace="t"
/db_xref="dbSNP:36105994"
exon 810..927
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="alignment:Splign:1.39.8"
exon 928..988
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="alignment:Splign:1.39.8"
exon 989..1051
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="alignment:Splign:1.39.8"
exon 1052..1153
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="alignment:Splign:1.39.8"
exon 1154..1244
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="alignment:Splign:1.39.8"
variation 1174
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/replace="c"
/replace="t"
/db_xref="dbSNP:34096390"
exon 1245..1364
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="alignment:Splign:1.39.8"
exon 1365..1453
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="alignment:Splign:1.39.8"
exon 1454..1671
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="alignment:Splign:1.39.8"
variation 1669
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/replace="c"
/replace="t"
/db_xref="dbSNP:34930819"
exon 1672..1803
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="alignment:Splign:1.39.8"
exon 1804..1959
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="alignment:Splign:1.39.8"
exon 1960..2136
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="alignment:Splign:1.39.8"
exon 2137..2277
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="alignment:Splign:1.39.8"
variation 2261
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/replace="c"
/replace="t"
/db_xref="dbSNP:34966"
exon 2278..2358
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="alignment:Splign:1.39.8"
exon 2359..2417
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="alignment:Splign:1.39.8"
exon 2418..2438
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="alignment:Splign:1.39.8"
exon 2439..2603
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="alignment:Splign:1.39.8"
exon 2604..6860
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/inference="alignment:Splign:1.39.8"
STS 2613..2734
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/standard_name="RH36041"
/db_xref="UniSTS:53586"
variation 2653
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/replace="c"
/replace="t"
/db_xref="dbSNP:35082809"
variation 2992
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/replace="c"
/replace="g"
/db_xref="dbSNP:35462997"
STS 3254..4092
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/standard_name="SEMA6A_812"
/db_xref="UniSTS:277702"
variation 3598
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/replace="a"
/replace="g"
/db_xref="dbSNP:1046354"
variation 3713
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/replace="c"
/replace="t"
/db_xref="dbSNP:35628596"
STS 4026..4262
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/standard_name="STS-W92748"
/db_xref="UniSTS:58848"
variation 4136
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/replace="a"
/replace="c"
/db_xref="dbSNP:1046372"
STS 4376..4623
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/standard_name="STS-N27270"
/db_xref="UniSTS:20815"
STS 5651..5879
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/standard_name="STS-N21368"
/db_xref="UniSTS:26964"
STS 6746..6854
/gene="SEMA6A"
/gene_synonym="HT018; SEMA; SEMA6A1; SEMAQ; VIA"
/standard_name="RH18405"
/db_xref="UniSTS:11277"
ORIGIN
ctccgcccgggagcggcggcctctccggtgacagaggagtagtgagcggcacggggtgaggctgcagccaactccgctccccgcgcactcggctgcccaggcgctcggaacccagcagcggcgctcctccgcggtgccggtcgcccgcgatgcccgcttagcagcgtgtagcagcggccagcatcaccacacccgcggcaccgcgctgccggccgcagagccgggccagagccttgcacccctgccccagcccccaccccgccccccgccctgaaatgacttgttaatcggcgcagacaccaccaaggggactcaccgaagtggaatccaagtggaatttggatttggagaagagtttcttgaacatttaccctcttccttgttggttttctttttctttttcttctttttttttttggcttcttttttcctctccccttctccgctcgtcattggagatgaacacatcgcgtttgcatcccagaaagtagtcgccgcgactatttcccccaaagagacaagcacacatgtaggaatgacaaaggcttgcgaaggagagagcgcagcccgcggcccggagagatcccctcgataatggattactaaatgggatacacgctgtaccagttcgctccgagccccggccgcctgtccgtcgatgcaccgaaaagggtgaagtagagaaataaagtctccccgctgaactactatgaggtcagaagccttgctgctatatttcacactgctacactttgctggggctggtttcccagaagattctgagccaatcagtatttcgcatggcaactatacaaaacagtatccggtgtttgtgggccacaagccaggacggaacaccacacagaggcacaggctggacatccagatgattatgatcatgaacggaaccctctacattgctgctagggaccatatttatactgttgatatagacacatcacacacggaagaaatttattgtagcaaaaaactgacatggaaatctagacaggccgatgtagacacatgcagaatgaagggaaaacataaggatgagtgccacaactttattaaagttcttctaaagaaaaacgatgatgcattgtttgtctgtggaactaatgccttcaacccttcctgcagaaactataagatggatacattggaaccattcggggatgaattcagcggaatggccagatgcccatatgatgccaaacatgccaacgttgcactgtttgcagatggaaaactatactcagccacagtgactgacttccttgccattgacgcagtcatttaccggagtcttggagaaagccctaccctgcggaccgtcaagcacgattcaaaatggttgaaagaaccatactttgttcaagccgtggattacggagattatatctacttcttcttcagggaaatagcagtggagtataacaccatgggaaaggtagttttcccaagagtggctcaggtttgtaagaatgatatgggaggatctcaaagagtcctggagaaacagtggacgtcgttcctgaaggcgcgcttgaactgctcagttcctggagactctcatttttatttcaacattctccaggcagttacagatgtgattcgtatcaacgggcgtgatgttgtcctggcaacgttttctacaccttataacagcatccctgggtctgcagtctgtgcctatgacatgcttgacattgccagtgtttttactgggagattcaaggaacagaagtctcctgattccacctggacaccagttcctgatgaacgagttcctaagcccaggccaggttgctgtgctggctcatcctccttagaaagatatgcaacctccaatgagttccctgatgataccctgaacttcatcaagacgcacccgctcatggatgaggcagtgccctccatcttcaacaggccatggttcctgagaacaatggtcagataccgccttaccaaaattgcagtggacacagctgctgggccatatcagaatcacactgtggtttttctgggatcagagaagggaatcatcttgaagtttttggccagaataggaaatagtggttttctaaatgacagccttttcctggaggagatgagtgtttacaactctgaaaaatgcagctatgatggagtcgaagacaaaaggatcatgggcatgcagctggacagagcaagcagctctctgtatgttgcgttctctacctgtgtgataaaggttccccttggccggtgtgaacgacatgggaagtgtaaaaaaacctgtattgcctccagagacccatattgtggatggataaaggaaggtggtgcctgcagccatttatcacccaacagcagactgacttttgagcaggacatagagcgtggcaatacagatggtctgggggactgtcacaattcctttgtggcactgaatgggcattccagttccctcttgcccagcacaaccacatcagattcgacggctcaagaggggtatgagtctaggggaggaatgctggactggaagcatctgcttgactcacctgacagcacagaccctttgggggcagtgtcttcccataatcaccaagacaagaagggagtgattcgggaaagttacctcaaaggccacgaccagctggttcccgtcaccctcttggccattgcagtcatcctggctttcgtcatgggggccgtcttctcgggcatcaccgtctactgcgtctgtgatcatcggcgcaaagacgtggctgtggtgcagcgcaaggagaaggagctcacccactcgcgccggggctccatgagcagcgtcaccaagctcagcggcctctttggggacactcaatccaaagacccaaagccggaggccatcctcacgccactcatgcacaacggcaagctcgccactcccggcaacacggccaagatgctcattaaagcagaccagcaccacctggacctgacggccctccccaccccagagtcaaccccaacgctgcagcagaagcggaagcccagccgcggcagccgcgagtgggagaggaaccagaacctcatcaatgcctgcacaaaggacatgccccccatgggctcccctgtgattcccacggacctgcccctgcgggcctcccccagccacatccccagcgtggtggtcctgcccatcacgcagcagggctaccagcatgagtacgtggaccagcccaaaatgagcgaggtggcccagatggcgctggaggaccaggccgccacactggagtataagaccatcaaggaacatctcagcagcaagagtcccaaccatggggtgaaccttgtggagaacctggacagcctgccccccaaagttccacagcgggaggcctccctgggtcccccgggagcctccctgtctcagaccggtctaagcaagcggctggaaatgcaccactcctcttcctacggggttgactataagaggagctaccccacgaactcgctcacgagaagccaccaggccaccactctcaaaagaaacaacactaactcctccaattcctctcacctctccagaaaccagagctttggcaggggagacaacccgccgcccgccccgcagagggtggactccatccaggtgcacagctcccagccatctggccaggccgtgactgtctcgaggcagcccagcctcaacgcctacaactcactgacaaggtcggggctgaagcgtacgccctcgctaaagccggacgtaccccccaaaccatcctttgctcccctttccacatccatgaagcccaatgatgcgtgtacataatcccagggggagggggtcaggtgtcgaaccagcaggcaaggcgaggtgcccgctcagctcagcaaggttctcaactgcctcgagtacccaccagaccaagaaggcctgcggcagagccgaggacgctgggtcctcctctctgggacacaggggtactcacgaaaactgggccgcgtggtttggtgaaggtttgcaacggcggggactcaccttcattctcttccttcactttcccccacaccctacaacaggtcggacccacaaaagacttcagttatcatcacaaacatgagccaaaagcacatacctaccccatcccccacccccacacacacacacacacacacatgcacacaacacatacacacacacgcacagaggtgaacagaaactgaaacattttgtccacaacttcacgggacgtggccagactgggtttgcgttccaacctgcaaaacacaaatacattttttaaaatcaagaaaatttaaaaagacaaaaaaaaaagaattcattgataattctaactcagactttaacaatggcagaagtttactatgcgcaaatactgtgaaatgcccgccagtgttacagctttctgttgcagcagataaatgccatgttgggcaactatgtcatagatttctgctcctcctctcttttaatgaaataacgtgaccgttaacgcaagtaactctttatttattgttcaccctttttttccttaaggaaaggactcttccaaatatcatcctatgaacagctcttcagaaagcccattgaaagttaaactatttaacgtgaaatccattaactggaataattgagtttctttatttttacaataaattcactgagtaaataagttggagctggaattctgagctttgtgtttggactgtctggtctgtagctaaaggaaaaagttaggaggggaatatttatttaaatctatcagttcattgcctggtcaggtctctggcctataaacatgcaaaaaaactaattcatgttaaagtccttccagatcctaatttctaaagcaatcaggagagaaagcttttagaatggcacatcatatctcattgatgccaacatggttttgtccatggttctgactttctgtgaaggcaccagcttgcaatatgccatcccatttcaccttgcatgtgagacagcaaacaaaatccacaaatggtgtgaactaatatgctggctgctaccttgcataaattaatgatttgatcacacgggttcttcgtggggttacatctgtgaatagcctgttttccacatgtaaatttgtgccttacaccttgagttgtgtacacttgtaaactctttatgatcaactgttcccccttttgaaataagtgcagatatttatttaaccctcccttccccaccctctgccccacttccagccctctgaaagattggagtcaagcagatggaagaatgcagtggtgatagttgtcatgcgacagcctgagaacgctgggcagcaccacaccctccaattcacactgccttctagttgtgccaactggaaccaccctttggctgtgctgcgaagcatggaccccagtgttgttgtgggtgtgtcaaatcccctttcatcctcaagagctccctgcttcccttagattatttcaatacggtgatatccttatttgctagcagaaaagggactaacgtcccattcctcttttctgctgcgtccactggctagagagcaggcggtgcgcggttgggcagacacctgggaggagtctccaagccatgtgcacagcacacacgtgcagtgcacacaaagaaatgacatggaaatagatgcaggcaggctggtccctgctgtgattaacgagtaactccaagtacaaggccgaccacaatggatgctgcaaaaacgttgactggggcaaaggattttttattttattttttattttgttaattatgtttttaggggatgggaggtggtgtgtgtttttctcctcttggttttcatttgctcaagcacacaaaagggacttttgtttactctatcatgaacaaaggaactgtccacatactgtaaaccatgagcagtgttgttgttgtttttttaaacagtatatttggtggtctctttgtctgcttttatttccagttcgatcttctgggtttagttttgtctttaaaaagaattcaaaaaaagactgacaatgacagttttgagttggatagtgaaaaagtggagcctccataatcagtgtggttgccttcagacctgagtacttagctgagggtgggtgagagccctttgttccaaaagtccattagttttgctgttgtttaggagtaggtggttgttgttgtttttactttttttttttttggcttttgtaatggaatccatgttcacatcctgtgaactctgtctcctgaaaccctgaagtatttcctagaacctgaaatattgttttcttccttgaattttctctagaaatgcagaaattaggaaggtgatgggtctgtatccccctgcccccttctttcccatgcttgactcccgagagtactggcagtgcagcacccatcattgacgtaagcggctgtcttgtccagtgtttgtaggcatcactgcctcagctgttaaggagacctgtgtcaaaacttacatccacattcctacacccccacaacccatcacttctggtgttaaccctaaaatacccacatgtattgagctggtcttctgcatttaagtatttctccccagtttttttccccactgtgtgtggggggagggtccataaacccgagtgtgcctttgctttccacccttgctagacactggtagatgcaacaaactcagatttatatttgttgtaaagttgtaaaaatattgtgatgtcaccaattttccttccatctccacatcccctaacatctgattcacgacttaatgtatgttgtaagaaaagaaaaaagaaaagaaaaaaagggaaaaaagaaaagcaaggaaaaggctctttattacttaaaagtaataaaacctgactgttctatatta
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:57556 -> Molecular function: GO:0004888 [transmembrane signaling receptor activity] evidence: IEA
GeneID:57556 -> Molecular function: GO:0005515 [protein binding] evidence: IPI
GeneID:57556 -> Molecular function: GO:0030215 [semaphorin receptor binding] evidence: IEA
GeneID:57556 -> Biological process: GO:0001764 [neuron migration] evidence: IEA
GeneID:57556 -> Biological process: GO:0006915 [apoptotic process] evidence: NAS
GeneID:57556 -> Biological process: GO:0007010 [cytoskeleton organization] evidence: NAS
GeneID:57556 -> Biological process: GO:0007166 [cell surface receptor signaling pathway] evidence: NAS
GeneID:57556 -> Biological process: GO:0007399 [nervous system development] evidence: NAS
GeneID:57556 -> Biological process: GO:0007411 [axon guidance] evidence: NAS
GeneID:57556 -> Biological process: GO:0007411 [axon guidance] evidence: TAS
GeneID:57556 -> Biological process: GO:0009887 [organ morphogenesis] evidence: NAS
GeneID:57556 -> Biological process: GO:0051642 [centrosome localization] evidence: IEA
GeneID:57556 -> Biological process: GO:0071526 [semaphorin-plexin signaling pathway] evidence: IEA
GeneID:57556 -> Biological process: GO:2001224 [positive regulation of neuron migration] evidence: IEA
GeneID:57556 -> Cellular component: GO:0005887 [integral to plasma membrane] evidence: IEA
GeneID:57556 -> Cellular component: GO:0016021 [integral to membrane] evidence: NAS
GeneID:57556 -> Cellular component: GO:0030424 [axon] evidence: NAS
by
@meso_cacase at
DBCLS
This page is licensed under a Creative Commons Attribution 2.1 Japan License.