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2024-04-19 13:13:43, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_020226 4118 bp mRNA linear PRI 17-APR-2013
DEFINITION Homo sapiens PR domain containing 8 (PRDM8), transcript variant 1,
mRNA.
ACCESSION NM_020226
VERSION NM_020226.3 GI:150378438
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4118)
AUTHORS Newton-Cheh,C., Johnson,T., Gateva,V., Tobin,M.D., Bochud,M.,
Coin,L., Najjar,S.S., Zhao,J.H., Heath,S.C., Eyheramendy,S.,
Papadakis,K., Voight,B.F., Scott,L.J., Zhang,F., Farrall,M.,
Tanaka,T., Wallace,C., Chambers,J.C., Khaw,K.T., Nilsson,P., van
der Harst,P., Polidoro,S., Grobbee,D.E., Onland-Moret,N.C.,
Bots,M.L., Wain,L.V., Elliott,K.S., Teumer,A., Luan,J., Lucas,G.,
Kuusisto,J., Burton,P.R., Hadley,D., McArdle,W.L., Brown,M.,
Dominiczak,A., Newhouse,S.J., Samani,N.J., Webster,J., Zeggini,E.,
Beckmann,J.S., Bergmann,S., Lim,N., Song,K., Vollenweider,P.,
Waeber,G., Waterworth,D.M., Yuan,X., Groop,L., Orho-Melander,M.,
Allione,A., Di Gregorio,A., Guarrera,S., Panico,S., Ricceri,F.,
Romanazzi,V., Sacerdote,C., Vineis,P., Barroso,I., Sandhu,M.S.,
Luben,R.N., Crawford,G.J., Jousilahti,P., Perola,M., Boehnke,M.,
Bonnycastle,L.L., Collins,F.S., Jackson,A.U., Mohlke,K.L.,
Stringham,H.M., Valle,T.T., Willer,C.J., Bergman,R.N., Morken,M.A.,
Doring,A., Gieger,C., Illig,T., Meitinger,T., Org,E., Pfeufer,A.,
Wichmann,H.E., Kathiresan,S., Marrugat,J., O'Donnell,C.J.,
Schwartz,S.M., Siscovick,D.S., Subirana,I., Freimer,N.B.,
Hartikainen,A.L., McCarthy,M.I., O'Reilly,P.F., Peltonen,L.,
Pouta,A., de Jong,P.E., Snieder,H., van Gilst,W.H., Clarke,R.,
Goel,A., Hamsten,A., Peden,J.F., Seedorf,U., Syvanen,A.C.,
Tognoni,G., Lakatta,E.G., Sanna,S., Scheet,P., Schlessinger,D.,
Scuteri,A., Dorr,M., Ernst,F., Felix,S.B., Homuth,G., Lorbeer,R.,
Reffelmann,T., Rettig,R., Volker,U., Galan,P., Gut,I.G.,
Hercberg,S., Lathrop,G.M., Zelenika,D., Deloukas,P., Soranzo,N.,
Williams,F.M., Zhai,G., Salomaa,V., Laakso,M., Elosua,R.,
Forouhi,N.G., Volzke,H., Uiterwaal,C.S., van der Schouw,Y.T.,
Numans,M.E., Matullo,G., Navis,G., Berglund,G., Bingham,S.A.,
Kooner,J.S., Connell,J.M., Bandinelli,S., Ferrucci,L., Watkins,H.,
Spector,T.D., Tuomilehto,J., Altshuler,D., Strachan,D.P., Laan,M.,
Meneton,P., Wareham,N.J., Uda,M., Jarvelin,M.R., Mooser,V.,
Melander,O., Loos,R.J., Elliott,P., Abecasis,G.R., Caulfield,M. and
Munroe,P.B.
CONSRTM Wellcome Trust Case Control Consortium
TITLE Genome-wide association study identifies eight loci associated with
blood pressure
JOURNAL Nat. Genet. 41 (6), 666-676 (2009)
PUBMED 19430483
REFERENCE 2 (bases 1 to 4118)
AUTHORS Xiao,B., Wilson,J.R. and Gamblin,S.J.
TITLE SET domains and histone methylation
JOURNAL Curr. Opin. Struct. Biol. 13 (6), 699-705 (2003)
PUBMED 14675547
REMARK Review article
REFERENCE 3 (bases 1 to 4118)
AUTHORS Jiang,G.L. and Huang,S.
TITLE The yin-yang of PR-domain family genes in tumorigenesis
JOURNAL Histol. Histopathol. 15 (1), 109-117 (2000)
PUBMED 10668202
REMARK Review article
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
AF275815.1, BC027929.1, BC071584.1, AI077328.1 and BC058908.1.
On Jul 3, 2007 this sequence version replaced gi:41349479.
##Evidence-Data-START##
Transcript exon combination :: AF275815.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
ERS025084 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-139 AF275815.1 1-139
140-1650 AF275815.1 142-1652
1651-2506 BC027929.1 669-1524
2507-3148 BC071584.1 1539-2180
3149-3508 AI077328.1 133-492
3509-4093 BC071584.1 2541-3125
4094-4118 BC058908.1 2538-2562
FEATURES Location/Qualifiers
source 1..4118
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="4"
/map="4q21"
gene 1..4118
/gene="PRDM8"
/gene_synonym="PFM5"
/note="PR domain containing 8"
/db_xref="GeneID:56978"
/db_xref="HGNC:13993"
exon 1..249
/gene="PRDM8"
/gene_synonym="PFM5"
/inference="alignment:Splign:1.39.8"
variation 34
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:186481422"
variation 38
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:139438268"
variation 120
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:149854425"
variation 167
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="g"
/db_xref="dbSNP:145848396"
variation 212
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="g"
/replace="t"
/db_xref="dbSNP:377512735"
exon 250..347
/gene="PRDM8"
/gene_synonym="PFM5"
/inference="alignment:Splign:1.39.8"
variation 265
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="g"
/db_xref="dbSNP:192046488"
variation 283
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="g"
/db_xref="dbSNP:184736342"
exon 348..474
/gene="PRDM8"
/gene_synonym="PFM5"
/inference="alignment:Splign:1.39.8"
variation 360
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="c"
/db_xref="dbSNP:10013909"
variation 385
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="g"
/replace="t"
/db_xref="dbSNP:185469552"
variation 395
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="c"
/db_xref="dbSNP:188050234"
exon 475..586
/gene="PRDM8"
/gene_synonym="PFM5"
/inference="alignment:Splign:1.39.8"
variation 498
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="g"
/db_xref="dbSNP:143066458"
variation 572
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="g"
/db_xref="dbSNP:115501918"
exon 587..836
/gene="PRDM8"
/gene_synonym="PFM5"
/inference="alignment:Splign:1.39.8"
variation 603
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="c"
/db_xref="dbSNP:2292847"
variation 607
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:2292846"
variation 700
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:113745086"
variation 747
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="g"
/replace="t"
/db_xref="dbSNP:62621819"
exon 837..1090
/gene="PRDM8"
/gene_synonym="PFM5"
/inference="alignment:Splign:1.39.8"
variation 858
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="c"
/db_xref="dbSNP:187471260"
variation 1002
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="g"
/db_xref="dbSNP:115557995"
misc_feature 1058..1060
/gene="PRDM8"
/gene_synonym="PFM5"
/note="upstream in-frame stop codon"
variation 1066
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="g"
/db_xref="dbSNP:28753926"
exon 1091..1229
/gene="PRDM8"
/gene_synonym="PFM5"
/inference="alignment:Splign:1.39.8"
variation 1119
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="t"
/db_xref="dbSNP:184208058"
variation 1212
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="g"
/db_xref="dbSNP:369902113"
exon 1230..1450
/gene="PRDM8"
/gene_synonym="PFM5"
/inference="alignment:Splign:1.39.8"
CDS 1232..3301
/gene="PRDM8"
/gene_synonym="PFM5"
/note="PR-domain containing protein 8; PR
domain-containing protein 8"
/codon_start=1
/product="PR domain zinc finger protein 8"
/protein_id="NP_064611.3"
/db_xref="GI:150378439"
/db_xref="CCDS:CCDS43243.1"
/db_xref="GeneID:56978"
/db_xref="HGNC:13993"
/translation="
MEDTGIQRGIWDGDAKAVQQCLTDIFTSVYTTCDIPENAIFGPCVLSHTSLYDSIAFIALKSTDKRTVPYIFRVDTSAANGSSEGLMWLRLVQSARDKEEQNLEAYIKNGQLFYRSLRRIAKDEELLVWYGKELTELLLLCPSRSHNKMNGSSPYTCLECSQRFQFEFPYVAHLRFRCPKRLHSADISPQDEQGGGVGTKDHGGGGGGGKDQQQQQQEAPLGPGPKFCKAGPLHHYPSPSPESSNPSAAAGGSSAKPSTDFHNLARELENSRGGSSCSPAQSLSSGSGSGGGGGHQEAELSPDGIATGGGKGKRKFPEEAAEGGGGAGLVGGRGRFVERPLPASKEDLVCTPQQYRASGSYFGLEENGRLFAPPSPETGEAKRSAFVEVKKAARAASLQEEGTADGAGVASEDQDAGGGGGSSTPAAASPVGAEKLLAPRPGGPLPSRLEGGSPARGSAFTSVPQLGSAGSTSGGGGTGAGAAGGAGGGQGAASDERKSAFSQPARSFSQLSPLVLGQKLGALEPCHPADGVGPTRLYPAAADPLAVKLQGAADLNGGCGSLPSGGGGLPKQSPFLYATAFWPKSSAAAAAAAAAAAAGPLQLQLPSALTLLPPSFTSLCLPAQNWCAKCNASFRMTSDLVYHMRSHHKKEYAMEPLVKRRREEKLKCPICNESFRERHHLSRHMTSHN
"
misc_feature 1316..1633
/gene="PRDM8"
/gene_synonym="PFM5"
/note="SET domain; Region: SET; cl02566"
/db_xref="CDD:207647"
misc_feature 3230..3295
/gene="PRDM8"
/gene_synonym="PFM5"
/note="Zinc finger, C2H2 type; Region: zf-C2H2; cl15478"
/db_xref="CDD:210117"
variation 1237
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="g"
/replace="t"
/db_xref="dbSNP:1139248"
variation 1241
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="g"
/db_xref="dbSNP:190431626"
variation 1245
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="g"
/db_xref="dbSNP:372824214"
variation 1264
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="g"
/db_xref="dbSNP:375338780"
variation 1316
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="g"
/db_xref="dbSNP:199585477"
variation 1348
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:369098269"
variation 1376
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="g"
/db_xref="dbSNP:372651952"
variation 1403
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="g"
/db_xref="dbSNP:377451338"
variation 1422
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="g"
/db_xref="dbSNP:192817796"
variation 1432
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="g"
/db_xref="dbSNP:371265360"
exon 1451..1682
/gene="PRDM8"
/gene_synonym="PFM5"
/inference="alignment:Splign:1.39.8"
variation 1453
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="g"
/db_xref="dbSNP:375203530"
variation 1471
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:368117727"
variation 1476
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:139810168"
variation 1502
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:370312299"
variation 1507
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="g"
/db_xref="dbSNP:373706543"
variation 1512
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="c"
/db_xref="dbSNP:368720297"
variation 1559
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="g"
/db_xref="dbSNP:199746703"
variation 1560
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="g"
/db_xref="dbSNP:200777615"
variation 1603
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="g"
/db_xref="dbSNP:372621624"
variation 1612
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="c"
/db_xref="dbSNP:368275238"
variation 1614
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:372022633"
variation 1640
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:376010390"
exon 1683..4098
/gene="PRDM8"
/gene_synonym="PFM5"
/inference="alignment:Splign:1.39.8"
variation 1690
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="c"
/db_xref="dbSNP:374385368"
variation 1774
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="t"
/db_xref="dbSNP:377755509"
variation 1786
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="g"
/replace="t"
/db_xref="dbSNP:377684484"
variation 1790
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="g"
/db_xref="dbSNP:200231947"
variation 1804
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:373210293"
variation 1833
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="g"
/db_xref="dbSNP:377103966"
variation 1849
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="g"
/db_xref="dbSNP:370541374"
variation 1913
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:370947658"
variation 1952
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:201806195"
variation 1953
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="c"
/db_xref="dbSNP:200010979"
variation 1993
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:142234659"
variation 2033
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="g"
/db_xref="dbSNP:374498169"
variation 2045
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:202018297"
variation 2062
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:368682315"
STS 2166..2331
/gene="PRDM8"
/gene_synonym="PFM5"
/standard_name="G42343"
/db_xref="UniSTS:94202"
STS 2166..2283
/gene="PRDM8"
/gene_synonym="PFM5"
/standard_name="SHGC-67366"
/db_xref="UniSTS:57973"
variation 2166
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="g"
/db_xref="dbSNP:201579839"
variation 2218
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="g"
/replace="t"
/db_xref="dbSNP:6831357"
variation 2281
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:374280707"
variation 2326
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="g"
/db_xref="dbSNP:371415505"
variation 2368
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="c"
/db_xref="dbSNP:144810863"
variation 2545
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:188061449"
variation 2621
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:201251555"
variation 2716
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:373726901"
variation 2852
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="g"
/replace="t"
/db_xref="dbSNP:371675673"
variation 2875
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="g"
/replace="t"
/db_xref="dbSNP:367641236"
variation 2914
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:150632206"
variation 2934
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="g"
/db_xref="dbSNP:201815947"
variation 2957
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:28405693"
STS 3077..3998
/gene="PRDM8"
/gene_synonym="PFM5"
/standard_name="PRDM8_8072"
/db_xref="UniSTS:471727"
variation 3083
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:371708653"
variation 3088
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="g"
/replace="t"
/db_xref="dbSNP:140737026"
variation 3106
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:369934620"
variation 3187
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:374015672"
variation 3197
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:200471159"
variation 3211
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="g"
/db_xref="dbSNP:12780"
variation 3238
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:371955630"
variation 3271
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:376730468"
variation 3311
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="g"
/replace="t"
/db_xref="dbSNP:28529405"
variation 3424
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:116684530"
variation 3429..3430
/gene="PRDM8"
/gene_synonym="PFM5"
/replace=""
/replace="c"
/db_xref="dbSNP:375480658"
variation 3439
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="g"
/db_xref="dbSNP:2292844"
variation 3450..3451
/gene="PRDM8"
/gene_synonym="PFM5"
/replace=""
/replace="ca"
/db_xref="dbSNP:201781516"
variation 3451..3452
/gene="PRDM8"
/gene_synonym="PFM5"
/replace=""
/replace="ca"
/db_xref="dbSNP:367775621"
variation 3452
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="g"
/db_xref="dbSNP:111867732"
variation 3453
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:144648245"
variation 3501..3502
/gene="PRDM8"
/gene_synonym="PFM5"
/replace=""
/replace="ac"
/db_xref="dbSNP:200265171"
variation 3504
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="g"
/db_xref="dbSNP:2292843"
variation 3506..3509
/gene="PRDM8"
/gene_synonym="PFM5"
/replace=""
/replace="cacc"
/db_xref="dbSNP:143784147"
variation 3507..3510
/gene="PRDM8"
/gene_synonym="PFM5"
/replace=""
/replace="accc"
/db_xref="dbSNP:371066257"
variation 3507
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="c"
/db_xref="dbSNP:10084970"
variation 3508..3509
/gene="PRDM8"
/gene_synonym="PFM5"
/replace=""
/replace="a"
/db_xref="dbSNP:201337248"
variation 3509
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="c"
/db_xref="dbSNP:13110335"
variation 3514..3516
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="aca"
/replace="ccc"
/db_xref="dbSNP:375364524"
variation 3515..3516
/gene="PRDM8"
/gene_synonym="PFM5"
/replace=""
/replace="a"
/db_xref="dbSNP:149511008"
variation 3515
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="c"
/db_xref="dbSNP:76116250"
variation 3516..3517
/gene="PRDM8"
/gene_synonym="PFM5"
/replace=""
/replace="a"
/db_xref="dbSNP:371717984"
variation 3517
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="c"
/db_xref="dbSNP:56932557"
variation 3536
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="a"
/replace="c"
/db_xref="dbSNP:72656536"
variation 3559
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="g"
/replace="t"
/db_xref="dbSNP:28760378"
variation 3596
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="g"
/db_xref="dbSNP:2292842"
variation 3736
/gene="PRDM8"
/gene_synonym="PFM5"
/replace="c"
/replace="t"
/db_xref="dbSNP:183241437"
ORIGIN
aaaagcagcatcagacaagagctttattaatcccttacacgagcaaatgcgatctctgacctactagacttgttttcctacaatttcacaaaaagcctcgctagaggaatgtgcaaggacagaagggaaactgaggagacccgcaactcattagcgaaataatagggtgcacttcaataaaaatgcggtcctgaagtggagcagactcaccggcaaggagcccggaaaatcgtcaggggcggcggcaaaatactatcaaatcagcctgggaagcatcttttcgctcagcaagttcaagagaacaaatatgttacaatccttgcctattcttgcctccacttcataatgtcataaaagccacctggggtgtcatttatcaacctctctccagcccactcttccaaaataacactacagtttcctacatgtgtatttttgccaggactccaaagagccttgctaaagtggaacaagcaaaatcctcccctggcctcctgggactgcagtcaccaggctgtcaaagcctcaataccccactgagttccagagaagggtctcaaagctgggagaggatcaaactaacatggagtagagaattgaactgtgaaaaagaagcccgagattccccagcgacgtggtgttgcagccccgttgaaggagtcaacttgcaggctgttaaagacctcaagtcattagcatcagctgctgcactaaaggggcaagtcagcgcctctaagtggcttagcgcacaaacgaggctcccgagacggcctcggcaactccatcccctcctccaccacccgctggatgtgaaaagctttccggagcccatcttgggggaagcttggtagtgttggcgctcctgaagagagacgacgcccgtttatcacccccaggcaactagctgcgcaaatcagcggtggctccagggctagagaatccctggagctaaccgcacccctctccctttcacggaacgcggactccggggaaatacgcacggggtccgcacgcgctgggtgtccagctctctgtcacagcttctccaagtgcctagtgaaacggggaaaggccctctccaatcattttggaagagcctaaaaggcggcaacaccaacacctcttgacatggaaatacactgatacaataggcaaaaggaaacactcgattgcatcttcccggttccaggtggccttatttgggagattctatactgaccttattcctgtgatggaggatactggcatccagcgaggcatctgggatggagatgccaaggctgtccaacaatgtctgacagatatttttaccagcgtttacaccacctgcgacatccctgagaatgctatatttggtccctgtgtcctgagccatacttccctatatgacagcatagctttcatagctctcaagtctactgacaagagaacagtaccgtatatctttcgggtagacacctcagcagcaaatggttcctcagaaggtctcatgtggctgcggttggtccaatcggccagagataaggaagagcagaaccttgaagcctacataaaaaacggacagctgttctaccgctctctccgcaggattgccaaagacgaggagttactagtttggtacgggaaagaactgactgagttactcttgctctgcccctctagatcccacaacaaaatgaatgggtcgtccccttacacatgcctggaatgcagccaacgtttccagtttgagttcccctatgtggcgcatctgcgtttccgctgccccaagagacttcacagcgctgatataagtccccaagacgaacaaggcggcggcgtgggcaccaaggaccacgggggcggcggcggcggtggcaaagaccagcagcagcagcagcaggaggcacctttaggcccgggtcccaagttttgcaaagccggccccctccaccactacccatccccctccccggaaagcagcaacccatccgctgccgccggcggcagcagcgcgaagccatccacagacttccacaacctggccagggagctggaaaactcccggggaggcagcagctgctccccagcccagagcctcagcagcggtagcggcagcggcggcggcggcggccaccaggaggcggagctgagtcccgacggcatcgccacgggcggcggcaaaggaaagaggaaattcccggaggaggcggcggagggcggcggtggcgctggtctggtagggggccggggccgcttcgtagagcggcccctcccggcctccaaggaggatctggtgtgcacaccgcagcagtaccgagcctcgggcagctacttcggcctggaagagaacggccgcctcttcgcgccgccaagtcccgagacgggcgaggcgaagcgcagcgccttcgtggaggtgaagaaggctgcccgcgcggccagcctgcaggaggaggggacagccgacggcgcgggagtcgcctccgaggaccaggacgctggcggcggcggcggctcctccacgcccgcggccgcgtcaccggtgggcgccgagaagctgctggccccgcggcctgggggcccgctgcccagccggctcgagggcggcagtcctgcgaggggcagcgccttcacttcggtgccgcagctgggcagcgcgggcagcaccagcggtgggggcggaacgggcgccggggccgcaggcggcgcgggcgggggccagggcgccgcgtcggacgagcgcaaaagcgccttctcgcagccagcacgctctttctcgcagctgtccccgctggtgctgggccagaagctgggcgcgctcgagccatgccaccccgccgacggcgtgggccccaccagactctatcccgccgccgcggaccctctagcggtgaagctccagggggccgcggacctgaacggaggttgcgggtccctgccgagcggcggcggcggcctgcctaagcagagccccttcctgtacgccaccgccttctggcccaagagctccgctgccgctgcagccgcggctgcggcggcggccgcggggcccttgcagctgcagctgccctcggcgctcacgctgctgccgccctccttcacctcgctgtgtctgcccgcgcagaactggtgcgccaagtgcaatgcctccttccgcatgacctccgacctggtgtaccatatgaggtcgcaccacaaaaaggagtatgcgatggagcccttggtgaagcggcggcgagaggagaaactcaagtgccccatctgcaatgagtccttcagggagcgccaccacctctccaggcacatgacctcgcataattgactcggaaaggaccccagctttccacgcgcgcgcaagcacagttaagccacctgcaggaataaacacgcgagaacatccaccgcttccttgcaccccgaaaccctgcacaaagacacatacattcaccgcccccccgcccccccaacgcgcacacacacgtcctctcctcccaggaacctcattcaaatatttacccgggacacacacccccccccacacacacacacagacacactcacacacaagagccaggatggtggagttttgattgggtgggttgtttgagggggttttcttttgaatgcacgcattttcactttccccaaaacaaaggtacattttttaaaatgtcatatattgcaacatattgatgcatttgtcatacgtttctacttaaattattaagcacttacgatttagatgtaataattatatgtaagggcaaaatttattttagatataaagtaaaggaggagggtgagatgctttctgcatttcttgatgacagtttgtgttcctacaaaaataaacaaaatgaataaaaagggatcaccattcaatttgagtttccagggggaagtgcatgtataatgaaatgataatggacttcaatgaagaatgtcatcaattatgtacatatgtattttcttttaatacaaagtgtaattttgtgccagtgaaatggagtctgaatagttatgtgtttcttttatccctggaaatatttattaaactttatagtttatccgagtatgttggatgctttgacaataaatgactattttcttcaaagcaaaaaaaaaaaaaaaaaaaaaaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:56978 -> Molecular function: GO:0003677 [DNA binding] evidence: IEA
GeneID:56978 -> Molecular function: GO:0003682 [chromatin binding] evidence: IEA
GeneID:56978 -> Molecular function: GO:0003714 [transcription corepressor activity] evidence: IEA
GeneID:56978 -> Molecular function: GO:0046872 [metal ion binding] evidence: IEA
GeneID:56978 -> Molecular function: GO:0046974 [histone methyltransferase activity (H3-K9 specific)] evidence: IEA
GeneID:56978 -> Biological process: GO:0006351 [transcription, DNA-dependent] evidence: IEA
GeneID:56978 -> Biological process: GO:0021540 [corpus callosum morphogenesis] evidence: IEA
GeneID:56978 -> Biological process: GO:0021957 [corticospinal tract morphogenesis] evidence: IEA
GeneID:56978 -> Biological process: GO:0045892 [negative regulation of transcription, DNA-dependent] evidence: IEA
GeneID:56978 -> Cellular component: GO:0005634 [nucleus] evidence: IEA
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@meso_cacase at
DBCLS
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