2024-04-23 19:12:14, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_018955 971 bp mRNA linear PRI 17-APR-2013 DEFINITION Homo sapiens ubiquitin B (UBB), mRNA. ACCESSION NM_018955 VERSION NM_018955.2 GI:22538474 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 971) AUTHORS Chadwick,L., Gentle,L., Strachan,J. and Layfield,R. TITLE Review: unchained maladie - a reassessment of the role of Ubb(+1) -capped polyubiquitin chains in Alzheimer's disease JOURNAL Neuropathol. Appl. Neurobiol. 38 (2), 118-131 (2012) PUBMED 22082077 REMARK GeneRIF: age-dependent accumulation of Ubb(+1) , and how Ubb(+1) -mediated proteasome inhibition may contribute to Alzheimer's disease. [review] Review article REFERENCE 2 (bases 1 to 971) AUTHORS Haas,A.L. and Leach,C.A. TITLE A baker's dozen of ubiquitin JOURNAL Cell Biochem. Biophys. 60 (1-2), 1 (2011) PUBMED 21544573 REMARK GeneRIF: Studies indicate that biomedical research on ubiquitin moves into translational research and drug discovery. REFERENCE 3 (bases 1 to 971) AUTHORS Kessler,B.M. and Edelmann,M.J. TITLE PTMs in conversation: activity and function of deubiquitinating enzymes regulated via post-translational modifications JOURNAL Cell Biochem. Biophys. 60 (1-2), 21-38 (2011) PUBMED 21480003 REMARK GeneRIF: Studies indicate that DUBs recycle ubiquitin by processing polyubiquitin chains to generate free ubiquitin, and can be regulated by ubiquitination or phosphorylation. Review article REFERENCE 4 (bases 1 to 971) AUTHORS Dalrymple,M.B., Jaeger,W.C., Eidne,K.A. and Pfleger,K.D. TITLE Temporal profiling of orexin receptor-arrestin-ubiquitin complexes reveals differences between receptor subtypes JOURNAL J. Biol. Chem. 286 (19), 16726-16733 (2011) PUBMED 21378163 REMARK GeneRIF: analysis of orexin receptor 1 and 2 -arrestin-ubiquitin complexes REFERENCE 5 (bases 1 to 971) AUTHORS van Tijn,P., Hobo,B., Verhage,M.C., Oitzl,M.S., van Leeuwen,F.W. and Fischer,D.F. TITLE Alzheimer-associated mutant ubiquitin impairs spatial reference memory JOURNAL Physiol. Behav. 102 (2), 193-200 (2011) PUBMED 21059367 REMARK GeneRIF: The results of this study demonstrated that the UBB mutation caused the subtle defect in spatial reference memory formation, caused by a decrease in forebrain proteasome activity. REFERENCE 6 (bases 1 to 971) AUTHORS Adams,S.M., Sharp,M.G., Walker,R.A., Brammar,W.J. and Varley,J.M. TITLE Differential expression of translation-associated genes in benign and malignant human breast tumours JOURNAL Br. J. Cancer 65 (1), 65-71 (1992) PUBMED 1370760 REFERENCE 7 (bases 1 to 971) AUTHORS Pancre,V., Pierce,R.J., Fournier,F., Mehtali,M., Delanoye,A., Capron,A. and Auriault,C. TITLE Effect of ubiquitin on platelet functions: possible identity with platelet activity suppressive lymphokine (PASL) JOURNAL Eur. J. Immunol. 21 (11), 2735-2741 (1991) PUBMED 1657614 REFERENCE 8 (bases 1 to 971) AUTHORS Baker,R.T. and Board,P.G. TITLE The human ubiquitin-52 amino acid fusion protein gene shares several structural features with mammalian ribosomal protein genes JOURNAL Nucleic Acids Res. 19 (5), 1035-1040 (1991) PUBMED 1850507 REFERENCE 9 (bases 1 to 971) AUTHORS Webb,G.C., Baker,R.T., Fagan,K. and Board,P.G. TITLE Localization of the human UbB polyubiquitin gene to chromosome band 17p11.1-17p12 JOURNAL Am. J. Hum. Genet. 46 (2), 308-315 (1990) PUBMED 2154095 REFERENCE 10 (bases 1 to 971) AUTHORS Schlesinger,D.H. and Goldstein,G. TITLE Hybrid troponin reconstituted from vertebrate and arthropod subunits JOURNAL Nature 255 (5507), 423-424 (1975) PUBMED 124018 COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from X04803.2 and BC000379.2. This sequence is a reference standard in the RefSeqGene project. On Aug 29, 2002 this sequence version replaced gi:11024713. Summary: This gene encodes ubiquitin, one of the most conserved proteins known. Ubiquitin is required for ATP-dependent, nonlysosomal intracellular protein degradation of abnormal proteins and normal proteins with a rapid turnover. Ubiquitin is covalently bound to proteins to be degraded, and presumably labels these proteins for degradation. Ubiquitin also binds to histone H2A in actively transcribed regions but does not cause histone H2A degradation, suggesting that ubiquitin is also involved in regulation of gene expression. This gene consists of three direct repeats of the ubiquitin coding sequence with no spacer sequence. Consequently, the protein is expressed as a polyubiquitin precursor with a final amino acid after the last repeat. Aberrant form of this protein has been noticed in patients with Alzheimer's and Down syndrome. [provided by RefSeq, Jul 2008]. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: BC000379.2, BM927587.1 [ECO:0000332] RNAseq introns :: single sample supports all introns ERS025081, ERS025082 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..971 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="17" /map="17p12-p11.2" gene 1..971 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /note="ubiquitin B" /db_xref="GeneID:7314" /db_xref="HGNC:12463" /db_xref="HPRD:06771" /db_xref="MIM:191339" exon 1..132 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /inference="alignment:Splign:1.39.8" misc_feature 1 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /note="5'-most transcription initiation site has not been determined" variation 30 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="g" /replace="t" /db_xref="dbSNP:144918437" variation 33 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:368947993" misc_feature 45 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /note="transcription initiation site" variation 55 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="g" /db_xref="dbSNP:3744326" variation 107 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="g" /replace="t" /db_xref="dbSNP:75327805" variation 116 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="g" /db_xref="dbSNP:7208009" misc_feature 127..129 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /note="upstream in-frame stop codon" exon 133..971 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /inference="alignment:Splign:1.39.8" CDS 139..828 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /note="polyubiquitin B; Polyubiquitin-B" /codon_start=1 /product="polyubiquitin-B precursor" /protein_id="NP_061828.1" /db_xref="GI:11024714" /db_xref="CCDS:CCDS11177.1" /db_xref="GeneID:7314" /db_xref="HGNC:12463" /db_xref="HPRD:06771" /db_xref="MIM:191339" /translation="
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGC
" misc_feature 139..366 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /note="Ubiquitin; Region: Ubiquitin; cd01803" /db_xref="CDD:176398" mat_peptide 139..366 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /product="polyubiquitin-B" misc_feature 139..354 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /note="Ubiquitin homologues; Region: UBQ; smart00213" /db_xref="CDD:214563" misc_feature order(154..168,256..258,262..264,268..270,277..285, 340..342,346..366) /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /note="Ubq - E2 interaction site; other site" /db_xref="CDD:176398" misc_feature order(154..156,160..168,253..255,259..264,334..336, 340..342,346..366) /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /note="Ubq - UCH interaction site; other site" /db_xref="CDD:176398" misc_feature order(154..156,160..162,268..270,274..285,340..342, 346..348,352..354,364..366) /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /note="Ubq - CUE interaction site; other site" /db_xref="CDD:176398" misc_feature 340..342 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /experiment="experimental evidence, no additional details recorded" /note="Essential for function; propagated from UniProtKB/Swiss-Prot (P0CG47.1); other site" misc_feature 367..594 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /note="Ubiquitin; Region: Ubiquitin; cd01803" /db_xref="CDD:176398" mat_peptide 367..594 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /product="polyubiquitin-B" misc_feature 367..582 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /note="Ubiquitin homologues; Region: UBQ; smart00213" /db_xref="CDD:214563" misc_feature order(382..396,484..486,490..492,496..498,505..513, 568..570,574..594) /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /note="Ubq - E2 interaction site; other site" /db_xref="CDD:176398" misc_feature order(382..384,388..396,481..483,487..492,562..564, 568..570,574..594) /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /note="Ubq - UCH interaction site; other site" /db_xref="CDD:176398" misc_feature order(382..384,388..390,496..498,502..513,568..570, 574..576,580..582,592..594) /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /note="Ubq - CUE interaction site; other site" /db_xref="CDD:176398" misc_feature 595..822 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /note="Ubiquitin; Region: Ubiquitin; cd01803" /db_xref="CDD:176398" mat_peptide 595..822 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /product="polyubiquitin-B" misc_feature 595..810 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /note="Ubiquitin homologues; Region: UBQ; smart00213" /db_xref="CDD:214563" misc_feature order(610..624,712..714,718..720,724..726,733..741, 796..798,802..822) /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /note="Ubq - E2 interaction site; other site" /db_xref="CDD:176398" misc_feature order(610..612,616..624,709..711,715..720,790..792, 796..798,802..822) /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /note="Ubq - UCH interaction site; other site" /db_xref="CDD:176398" misc_feature order(610..612,616..618,724..726,730..741,796..798, 802..804,808..810,820..822) /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /note="Ubq - CUE interaction site; other site" /db_xref="CDD:176398" variation 160 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:11550545" variation 183 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="g" /replace="t" /db_xref="dbSNP:17026960" variation 195 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:151174232" STS 202..602 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /standard_name="39082591" /db_xref="UniSTS:498050" STS 202..374 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /standard_name="39082591" /db_xref="UniSTS:498050" variation 225..226 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="" /replace="t" /db_xref="dbSNP:34227126" variation 246 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:16962978" variation 249 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:16962981" STS 255..813 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /standard_name="D2S1561E" /db_xref="UniSTS:150646" STS 255..585 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /standard_name="D2S1561E" /db_xref="UniSTS:150646" STS 255..357 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /standard_name="D2S1561E" /db_xref="UniSTS:150646" variation 267 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:373239807" variation 281 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="a" /replace="t" /db_xref="dbSNP:139133663" variation 286 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:149735634" variation 288 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="a" /replace="g" /db_xref="dbSNP:143121650" variation 294 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:17849300" variation 297 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:145568298" variation 298 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:147392000" variation 303 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="g" /replace="t" /db_xref="dbSNP:148876590" variation 321 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:9908960" variation 333 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="g" /db_xref="dbSNP:146449749" variation 345 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="a" /replace="g" /db_xref="dbSNP:377358152" STS 372..647 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /standard_name="AA555564" /db_xref="UniSTS:206909" variation 393 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:370706400" variation 408 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:16962973" STS 430..602 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /standard_name="39082591" /db_xref="UniSTS:498050" variation 447 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="a" /replace="g" /db_xref="dbSNP:377487692" variation 459 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="a" /replace="g" /db_xref="dbSNP:17052364" variation 461 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="a" /replace="g" /db_xref="dbSNP:3202129" variation 465 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="a" /replace="g" /db_xref="dbSNP:1060199" STS 483..813 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /standard_name="D2S1561E" /db_xref="UniSTS:150646" STS 483..585 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /standard_name="D2S1561E" /db_xref="UniSTS:150646" variation 528 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:1060079" variation 564 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="a" /replace="c" /db_xref="dbSNP:148184773" variation 579 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="a" /replace="g" /db_xref="dbSNP:370468040" STS 600..647 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /standard_name="AA555564" /db_xref="UniSTS:206909" variation 621 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="a" /replace="c" /db_xref="dbSNP:141581067" STS 630..770 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /standard_name="RH1659" /db_xref="UniSTS:62659" STS 711..813 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /standard_name="D2S1561E" /db_xref="UniSTS:150646" variation 714 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="a" /replace="g" /db_xref="dbSNP:138298095" variation 717 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="a" /replace="g" /db_xref="dbSNP:376813261" variation 723 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:149612063" variation 731 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:11550548" variation 753 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:201208945" variation 772 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:1065103" variation 777 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:147281408" variation 783 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="a" /replace="g" /db_xref="dbSNP:201547246" variation 828..829 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="" /replace="t" /db_xref="dbSNP:368225113" variation 839 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="a" /replace="g" /db_xref="dbSNP:374182250" variation 844 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="a" /replace="t" /db_xref="dbSNP:116070441" variation 847 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:7218030" variation 852 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:374935774" variation 872 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:1061290" variation 876 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="a" /replace="g" /db_xref="dbSNP:369275749" variation 903 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="t" /db_xref="dbSNP:14261" variation 917 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="g" /replace="t" /db_xref="dbSNP:14660" polyA_signal 949..954 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" variation 969 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="c" /replace="g" /db_xref="dbSNP:185174661" variation 970 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:113339371" polyA_site 971 /gene="UBB" /gene_synonym="RPS27A; UBA52; UBC" /experiment="experimental evidence, no additional details recorded" ORIGIN
cactcgttgcataaatttgcgctccgccagcccggagcatttaggggcggttggctttgttgggtgagcttgtttgtgtccctgtgggtggacgtggttggtgattggcaggatcctggtatccgctaacaggtcaaaatgcagatcttcgtgaaaacccttaccggcaagaccatcacccttgaggtggagcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaggaaggcattccccccgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgtactctttctgactacaacatccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttcgtgaagaccctgaccggcaagaccatcaccctggaagtggagcccagtgacaccatcgaaaatgtgaaggccaagatccaggataaagaaggcatccctcccgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaggagtcgaccctgcacctggtcctgcgtctgagaggtggtatgcagatcttcgtgaagaccctgaccggcaagaccatcactctggaggtggagcccagtgacaccatcgaaaatgtgaaggccaagatccaagataaagaaggcatcccccccgaccagcagaggctcatctttgcaggcaagcagctggaagatggccgcactctttctgactacaacatccagaaagagtcgaccctgcacctggtcctgcgcctgaggggtggctgttaattcttcagtcatggcattcgcagtgcccagtgatggcattactctgcactatagccatttgccccaacttaagtttagaaattacaagtttcagtaatagctgaacctgttcaaaatgttaataaaggtttcgttgcatggta
//
ANNOTATIONS from NCBI Entrez Gene (20130726): GeneID:7314 -> Molecular function: GO:0005515 [protein binding] evidence: IPI GeneID:7314 -> Biological process: GO:0000082 [G1/S transition of mitotic cell cycle] evidence: TAS GeneID:7314 -> Biological process: GO:0000122 [negative regulation of transcription from RNA polymerase II promoter] evidence: TAS GeneID:7314 -> Biological process: GO:0000187 [activation of MAPK activity] evidence: TAS GeneID:7314 -> Biological process: GO:0000209 [protein polyubiquitination] evidence: TAS GeneID:7314 -> Biological process: GO:0000278 [mitotic cell cycle] evidence: TAS GeneID:7314 -> Biological process: GO:0002224 [toll-like receptor signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0002474 [antigen processing and presentation of peptide antigen via MHC class I] evidence: TAS GeneID:7314 -> Biological process: GO:0002479 [antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent] evidence: TAS GeneID:7314 -> Biological process: GO:0002755 [MyD88-dependent toll-like receptor signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0002756 [MyD88-independent toll-like receptor signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0006281 [DNA repair] evidence: TAS GeneID:7314 -> Biological process: GO:0006351 [transcription, DNA-dependent] evidence: TAS GeneID:7314 -> Biological process: GO:0006367 [transcription initiation from RNA polymerase II promoter] evidence: TAS GeneID:7314 -> Biological process: GO:0006915 [apoptotic process] evidence: TAS GeneID:7314 -> Biological process: GO:0006977 [DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest] evidence: TAS GeneID:7314 -> Biological process: GO:0007173 [epidermal growth factor receptor signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0007179 [transforming growth factor beta receptor signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0007219 [Notch signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0007220 [Notch receptor processing] evidence: TAS GeneID:7314 -> Biological process: GO:0007249 [I-kappaB kinase/NF-kappaB cascade] evidence: TAS GeneID:7314 -> Biological process: GO:0007254 [JNK cascade] evidence: TAS GeneID:7314 -> Biological process: GO:0008543 [fibroblast growth factor receptor signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0010467 [gene expression] evidence: TAS GeneID:7314 -> Biological process: GO:0016032 [viral process] evidence: TAS GeneID:7314 -> Biological process: GO:0016044 [cellular membrane organization] evidence: TAS GeneID:7314 -> Biological process: GO:0016070 [RNA metabolic process] evidence: TAS GeneID:7314 -> Biological process: GO:0016071 [mRNA metabolic process] evidence: TAS GeneID:7314 -> Biological process: GO:0016197 [endosomal transport] evidence: TAS GeneID:7314 -> Biological process: GO:0019067 [viral assembly, maturation, egress, and release] evidence: TAS GeneID:7314 -> Biological process: GO:0019068 [virion assembly] evidence: TAS GeneID:7314 -> Biological process: GO:0019082 [viral protein processing] evidence: TAS GeneID:7314 -> Biological process: GO:0019221 [cytokine-mediated signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0030512 [negative regulation of transforming growth factor beta receptor signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0031145 [anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process] evidence: TAS GeneID:7314 -> Biological process: GO:0032479 [regulation of type I interferon production] evidence: TAS GeneID:7314 -> Biological process: GO:0032480 [negative regulation of type I interferon production] evidence: TAS GeneID:7314 -> Biological process: GO:0032481 [positive regulation of type I interferon production] evidence: TAS GeneID:7314 -> Biological process: GO:0034134 [toll-like receptor 2 signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0034138 [toll-like receptor 3 signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0034142 [toll-like receptor 4 signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0034146 [toll-like receptor 5 signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0034162 [toll-like receptor 9 signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0034166 [toll-like receptor 10 signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0034220 [ion transmembrane transport] evidence: TAS GeneID:7314 -> Biological process: GO:0035666 [TRIF-dependent toll-like receptor signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0035872 [nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0038095 [Fc-epsilon receptor signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0038123 [toll-like receptor TLR1:TLR2 signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0038124 [toll-like receptor TLR6:TLR2 signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0042059 [negative regulation of epidermal growth factor receptor signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0042590 [antigen processing and presentation of exogenous peptide antigen via MHC class I] evidence: TAS GeneID:7314 -> Biological process: GO:0042981 [regulation of apoptotic process] evidence: TAS GeneID:7314 -> Biological process: GO:0043065 [positive regulation of apoptotic process] evidence: TAS GeneID:7314 -> Biological process: GO:0043066 [negative regulation of apoptotic process] evidence: TAS GeneID:7314 -> Biological process: GO:0043123 [positive regulation of I-kappaB kinase/NF-kappaB cascade] evidence: TAS GeneID:7314 -> Biological process: GO:0045087 [innate immune response] evidence: TAS GeneID:7314 -> Biological process: GO:0045944 [positive regulation of transcription from RNA polymerase II promoter] evidence: TAS GeneID:7314 -> Biological process: GO:0046788 [egress of virus within host cell] evidence: TAS GeneID:7314 -> Biological process: GO:0048011 [neurotrophin TRK receptor signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0050852 [T cell receptor signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0051092 [positive regulation of NF-kappaB transcription factor activity] evidence: TAS GeneID:7314 -> Biological process: GO:0051403 [stress-activated MAPK cascade] evidence: TAS GeneID:7314 -> Biological process: GO:0051436 [negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle] evidence: TAS GeneID:7314 -> Biological process: GO:0051437 [positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle] evidence: TAS GeneID:7314 -> Biological process: GO:0051439 [regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle] evidence: TAS GeneID:7314 -> Biological process: GO:0055085 [transmembrane transport] evidence: TAS GeneID:7314 -> Biological process: GO:0061418 [regulation of transcription from RNA polymerase II promoter in response to hypoxia] evidence: TAS GeneID:7314 -> Biological process: GO:0070423 [nucleotide-binding oligomerization domain containing signaling pathway] evidence: TAS GeneID:7314 -> Biological process: GO:0071456 [cellular response to hypoxia] evidence: TAS GeneID:7314 -> Biological process: GO:0097190 [apoptotic signaling pathway] evidence: TAS GeneID:7314 -> Cellular component: GO:0005654 [nucleoplasm] evidence: TAS GeneID:7314 -> Cellular component: GO:0005829 [cytosol] evidence: TAS GeneID:7314 -> Cellular component: GO:0005886 [plasma membrane] evidence: TAS GeneID:7314 -> Cellular component: GO:0010008 [endosome membrane] evidence: TAS GeneID:7314 -> Cellular component: GO:0030666 [endocytic vesicle membrane] evidence: TAS
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DBCLS
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