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2024-03-28 21:41:25, GGRNA : RefSeq release 60 (20130726)

LOCUS       NM_018898               5475 bp    mRNA    linear   PRI 18-JUL-2013
DEFINITION  Homo sapiens protocadherin alpha subfamily C, 1 (PCDHAC1),
            transcript variant 1, mRNA.
ACCESSION   NM_018898
VERSION     NM_018898.3  GI:14717400
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 5475)
  AUTHORS   Fox CS, Liu Y, White CC, Feitosa M, Smith AV, Heard-Costa N, Lohman
            K, Johnson AD, Foster MC, Greenawalt DM, Griffin P, Ding J, Newman
            AB, Tylavsky F, Miljkovic I, Kritchevsky SB, Launer L, Garcia M,
            Eiriksdottir G, Carr JJ, Gudnason V, Harris TB, Cupples LA and
            Borecki IB.
  CONSRTM   GIANT Consortium; MAGIC Consortium; GLGC Consortium
  TITLE     Genome-wide association for abdominal subcutaneous and visceral
            adipose reveals a novel locus for visceral fat in women
  JOURNAL   PLoS Genet. 8 (5), E1002695 (2012)
   PUBMED   22589738
REFERENCE   2  (bases 1 to 5475)
  AUTHORS   Wu Q, Zhang T, Cheng JF, Kim Y, Grimwood J, Schmutz J, Dickson M,
            Noonan JP, Zhang MQ, Myers RM and Maniatis T.
  TITLE     Comparative DNA sequence analysis of mouse and human protocadherin
            gene clusters
  JOURNAL   Genome Res. 11 (3), 389-404 (2001)
   PUBMED   11230163
REFERENCE   3  (bases 1 to 5475)
  AUTHORS   Nollet F, Kools P and van Roy F.
  TITLE     Phylogenetic analysis of the cadherin superfamily allows
            identification of six major subfamilies besides several solitary
            members
  JOURNAL   J. Mol. Biol. 299 (3), 551-572 (2000)
   PUBMED   10835267
  REMARK    Review article
REFERENCE   4  (bases 1 to 5475)
  AUTHORS   Yagi T and Takeichi M.
  TITLE     Cadherin superfamily genes: functions, genomic organization, and
            neurologic diversity
  JOURNAL   Genes Dev. 14 (10), 1169-1180 (2000)
   PUBMED   10817752
  REMARK    Review article
REFERENCE   5  (bases 1 to 5475)
  AUTHORS   Wu Q and Maniatis T.
  TITLE     Large exons encoding multiple ectodomains are a characteristic
            feature of protocadherin genes
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 97 (7), 3124-3129 (2000)
   PUBMED   10716726
REFERENCE   6  (bases 1 to 5475)
  AUTHORS   Sugino H, Hamada S, Yasuda R, Tuji A, Matsuda Y, Fujita M and Yagi
            T.
  TITLE     Genomic organization of the family of CNR cadherin genes in mice
            and humans
  JOURNAL   Genomics 63 (1), 75-87 (2000)
   PUBMED   10662547
REFERENCE   7  (bases 1 to 5475)
  AUTHORS   Wu Q and Maniatis T.
  TITLE     A striking organization of a large family of human neural
            cadherin-like cell adhesion genes
  JOURNAL   Cell 97 (6), 779-790 (1999)
   PUBMED   10380929
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence was derived from AA601497.1, HY126945.1,
            AJ007608.1, AC010223.6 and AF152303.1.
            On Jul 13, 2001 this sequence version replaced gi:14165426.
            
            Summary: This gene is a member of the protocadherin alpha gene
            cluster, one of three related gene clusters tandemly linked on
            chromosome five that demonstrate an unusual genomic organization
            similar to that of B-cell and T-cell receptor gene clusters. The
            alpha gene cluster is composed of 15 cadherin superfamily genes
            related to the mouse CNR genes and consists of 13 highly similar
            and 2 more distantly related coding sequences. The tandem array of
            15 N-terminal exons, or variable exons, are followed by downstream
            C-terminal exons, or constant exons, which are shared by all genes
            in the cluster. The large, uninterrupted N-terminal exons each
            encode six cadherin ectodomains while the C-terminal exons encode
            the cytoplasmic domain. These neural cadherin-like cell adhesion
            proteins are integral plasma membrane proteins that most likely
            play a critical role in the establishment and function of specific
            cell-cell connections in the brain. Alternative splicing has been
            observed and additional variants have been suggested but their
            full-length nature has yet to be determined. [provided by RefSeq,
            Jul 2008].
            
            Transcript Variant: This variant (1) includes the constant region
            exons and encodes the longest isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF152303.1, AJ007608.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           ERS025098 [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-52                AA601497.1         421-472             c
            53-176              HY126945.1         1-124
            177-1559            AJ007608.1         1-1383
            1560-1563           AC010223.6         134334-134337       c
            1564-2629           AJ007608.1         1388-2453
            2630-5475           AF152303.1         2454-5299
FEATURES             Location/Qualifiers
     source          1..5475
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="5"
                     /map="5q31"
     gene            1..5475
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /note="protocadherin alpha subfamily C, 1"
                     /db_xref="GeneID:56135"
                     /db_xref="HGNC:8676"
                     /db_xref="HPRD:07555"
                     /db_xref="MIM:606320"
     exon            1..2609
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /inference="alignment:Splign:1.39.8"
     variation       8
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:376759295"
     variation       134
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:375350613"
     variation       135
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:201136210"
     misc_feature    141..143
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /note="upstream in-frame stop codon"
     CDS             177..3068
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 1; protocadherin alpha-C1"
                     /codon_start=1
                     /product="protocadherin alpha-C1 isoform 1 precursor"
                     /protein_id="NP_061721.2"
                     /db_xref="GI:14717401"
                     /db_xref="CCDS:CCDS4241.1"
                     /db_xref="GeneID:56135"
                     /db_xref="HGNC:8676"
                     /db_xref="HPRD:07555"
                     /db_xref="MIM:606320"
                     /translation="
MVGCGVAVLCLWVSCGAAAGQLEYSVPEETERGVAVGNLSADLRLPAAAMSSRNFRFLSSHRELYFGVDLPSGNLVVREPADREQLCRAKAACVLTYDLVLEDPLELHKIRIHVLDTNDNSPLFPAGDVQLHIPEFLTPGARFTLPNAQDDDEGSNGILSYSLSPSQHFRLDMGSRVDGSEYPELVLEKALDREQRATHLLVLTARDGGLPARSGDAQVTIIVVDTNDNAPVFERSVYRTKVPETAPNGTVLFRVQALDPDEGSNGEVQYSLSNSTQAELRHRFHVHPKSGEVQVAASLGPPETLLEAYIEARDEGVFGLASTAKLLVEVTDVNDHAPELDFLTLSNPVPEDAAPGTVIALFSVKDEDLDSNGRVICGMSSAGPFQLTASFDNYYSLLIDGPLDREQISEYQVLITASDSGSPPLSTRRTITVSVADVNDNTPNFPQPQQELFVAENNGPGASLGRVFAQDPDLGKNGLVSYELLDVISEGPSASSLLAVESSSGAITAKTSFDFEQLRGFHFQVEGRDGGIPPRSATVTINLFVVDRNDNYPVILFPLPRNGSVPVEIVPRSARTGHLVTKVVAEDADSGSNAWLSYHISRASDSSLFRISANIGELRTARLVLPTDAVKQRVVVVVRDHGDPPLSSSVTLGVLLSNSVPQLLPDFEDVWEPGGQLSAQNLYLVIALACISFLFLGCLLFFVCTKLHQSPGCCAQSCCRSTEDLRYGSKMVSNPCMTSATIDVTTVERLSQTYLYRASLGLGSDNNSLLLRGEYNAADLRNLATGVGLNLPISCIQIRNRKGDHANVNAMPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ
"
     sig_peptide     177..233
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
     mat_peptide     234..3065
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /product="protocadherin alpha-C1 isoform 1"
     misc_feature    243..536
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /note="Cadherin tandem repeat domain; Region:
                     Cadherin_repeat; cd11304"
                     /db_xref="CDD:206637"
     misc_feature    order(258..263,420..422,426..428,522..524,528..533)
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /note="Ca2+ binding site [ion binding]; other site"
                     /db_xref="CDD:206637"
     misc_feature    564..863
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /note="Cadherin tandem repeat domain; Region:
                     Cadherin_repeat; cd11304"
                     /db_xref="CDD:206637"
     misc_feature    order(579..584,750..752,756..758,849..851,855..860)
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /note="Ca2+ binding site [ion binding]; other site"
                     /db_xref="CDD:206637"
     misc_feature    885..1184
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /note="Cadherin tandem repeat domain; Region:
                     Cadherin_repeat; cd11304"
                     /db_xref="CDD:206637"
     misc_feature    order(906..911,1074..1076,1080..1082,1170..1172,
                     1176..1181)
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /note="Ca2+ binding site [ion binding]; other site"
                     /db_xref="CDD:206637"
     misc_feature    1221..1499
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /note="Cadherin tandem repeat domain; Region:
                     Cadherin_repeat; cd11304"
                     /db_xref="CDD:206637"
     misc_feature    order(1227..1232,1386..1388,1392..1394,1485..1487,
                     1491..1496)
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /note="Ca2+ binding site [ion binding]; other site"
                     /db_xref="CDD:206637"
     misc_feature    1521..1829
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /note="Cadherin tandem repeat domain; Region:
                     Cadherin_repeat; cd11304"
                     /db_xref="CDD:206637"
     misc_feature    order(1542..1547,1716..1718,1722..1724,1815..1817,
                     1821..1826)
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /note="Ca2+ binding site [ion binding]; other site"
                     /db_xref="CDD:206637"
     misc_feature    1884..>2042
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /note="Cadherin tandem repeat domain; Region:
                     Cadherin_repeat; cd11304"
                     /db_xref="CDD:206637"
     misc_feature    2226..2288
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /inference="non-experimental evidence, no additional
                     details recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (Q9H158.2);
                     transmembrane region"
     misc_feature    2610..2897
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (Q9H158.2);
                     Region: 4 X 4 AA repeats of P-X-X-P"
     variation       187
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:369906778"
     variation       188
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:150445810"
     variation       212
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:371209962"
     variation       218
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:138351230"
     variation       226
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:374967520"
     variation       248
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:149218057"
     variation       257
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:369317394"
     variation       258
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:145276602"
     variation       320
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:137875923"
     variation       342
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:376173105"
     variation       360
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:142317713"
     variation       363
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:373922357"
     variation       366
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:141480000"
     variation       374
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:368092094"
     variation       386
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:144696843"
     variation       428
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:116743674"
     variation       438
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:141284501"
     variation       454
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:370656989"
     variation       464
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:202032784"
     variation       496
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:150770754"
     variation       502
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:374326542"
     variation       515
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:372235129"
     variation       553
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:139214405"
     variation       602
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:149532133"
     variation       607
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:114410083"
     variation       618
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:201745433"
     variation       624
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:77098674"
     variation       628
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:144568777"
     variation       701
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:74597681"
     variation       747
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:17844358"
     variation       753
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:17844359"
     variation       756
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:201932518"
     variation       773
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:147183638"
     variation       779
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:111935715"
     variation       781
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:199998669"
     variation       787
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:148532418"
     variation       795..796
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace=""
                     /replace="g"
                     /db_xref="dbSNP:35649607"
     variation       797
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:371881938"
     variation       838
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:142949338"
     variation       863
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:369243383"
     variation       880
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:374002981"
     variation       892
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:151084513"
     variation       905
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:141117468"
     variation       911
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:145171269"
     variation       928
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:370145398"
     variation       958
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:201769803"
     variation       964
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:200338376"
     variation       970
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:116072877"
     variation       983
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:155361"
     variation       998
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:111315855"
     variation       1003
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:144571902"
     variation       1031
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:17844361"
     variation       1034
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:155819"
     variation       1055
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:149265547"
     variation       1057
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:143568645"
     variation       1076
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:12522306"
     variation       1088
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:112037348"
     variation       1096
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:17844362"
     variation       1126
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:201721848"
     variation       1155
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:376396178"
     variation       1178
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:372774238"
     variation       1184
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:147219331"
     variation       1185
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:370478984"
     variation       1190
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:116016831"
     variation       1199
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:200890211"
     variation       1218
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:375068654"
     variation       1238
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:374146742"
     variation       1239
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:375705333"
     variation       1257
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:77078209"
     variation       1266
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:114786796"
     variation       1268
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:112872627"
     variation       1281
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:139322203"
     variation       1316
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:369075554"
     variation       1340
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:183490994"
     variation       1341
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:150006101"
     variation       1350
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:376048656"
     variation       1370
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:17844363"
     variation       1380
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:145229632"
     variation       1398
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:200013855"
     variation       1404
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:368067553"
     variation       1424
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:200493520"
     variation       1443
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:80316230"
     variation       1445
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:155820"
     variation       1458..1460
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace=""
                     /replace="cga"
                     /db_xref="dbSNP:79095134"
     variation       1469
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:371901224"
     variation       1481
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:371960819"
     STS             1486..1642
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /standard_name="A004B11"
                     /db_xref="UniSTS:20196"
     variation       1512
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:376517088"
     variation       1522
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:147430561"
     variation       1546
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:199571652"
     variation       1570
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:140714840"
     variation       1575
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:62384489"
     variation       1631
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:139222568"
     variation       1634
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:144619371"
     variation       1635
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:201396871"
     variation       1638
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:374655565"
     variation       1639
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:368876306"
     variation       1650
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:73793524"
     variation       1663
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:140058365"
     variation       1668
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:246074"
     variation       1676
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:17844366"
     variation       1711
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:137957181"
     variation       1735
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:146811468"
     variation       1759
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:369473809"
     variation       1776
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:189936741"
     variation       1806
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:373009645"
     variation       1809
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:200642808"
     variation       1817
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:112671808"
     variation       1825
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:149868042"
     variation       1836
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:145928329"
     variation       1847
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:138980511"
     variation       1848
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:140626189"
     variation       1855
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:369670852"
     variation       1861
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:377328620"
     variation       1869
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace=""
                     /replace="g"
                     /db_xref="dbSNP:11302676"
     variation       1874
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:78699363"
     variation       1884
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:144698541"
     variation       1919
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:148091714"
     variation       1940
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:116598649"
     variation       1948
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:186350151"
     variation       1963
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:369321422"
     variation       1980
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:78805068"
     variation       2021
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:140056024"
     variation       2028
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:143875858"
     variation       2032
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:191251073"
     variation       2041
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:372744198"
     variation       2074
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:370207805"
     variation       2094
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:143843461"
     variation       2112
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:199775949"
     variation       2141
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:373030634"
     variation       2152
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:374918492"
     variation       2172
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:201487044"
     variation       2201
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:181013464"
     variation       2223
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:367874769"
     variation       2290
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:77488964"
     variation       2306
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:17844367"
     variation       2319
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:6877058"
     variation       2328
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:17844369"
     variation       2341
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:17844370"
     variation       2342
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:372120484"
     variation       2352
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:111312148"
     variation       2362
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:144524128"
     variation       2363
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:76301676"
     variation       2380
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:113293568"
     variation       2412
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:142487298"
     variation       2419
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:185291434"
     variation       2422
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:150967804"
     variation       2447
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:142058597"
     variation       2467
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:148631412"
     variation       2485
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:146014873"
     variation       2489
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:201292001"
     variation       2497
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:199608631"
     variation       2508
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:138816649"
     variation       2511
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:141300036"
     variation       2539
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:150382315"
     variation       2553
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:138062218"
     variation       2563
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:368682683"
     variation       2591
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:149565434"
     variation       2602
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:78197291"
     exon            2610..2668
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /inference="alignment:Splign:1.39.8"
     variation       2613
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:374951627"
     variation       2618
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:201501759"
     variation       2634
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:141879545"
     variation       2635
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:150254638"
     variation       2647
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:138901709"
     variation       2667
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:149397164"
     exon            2669..2757
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /inference="alignment:Splign:1.39.8"
     STS             2669..2757
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /standard_name="PMC311048P1"
                     /db_xref="UniSTS:272867"
     variation       2685
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:147537783"
     variation       2700
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:139355257"
     variation       2715
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:201991205"
     variation       2723
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:201572428"
     variation       2733
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:369053351"
     variation       2734
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:79247475"
     variation       2751
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:199851685"
     exon            2758..5475
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /inference="alignment:Splign:1.39.8"
     STS             2761..2905
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /standard_name="RH91795"
                     /db_xref="UniSTS:85819"
     variation       2777
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:369515881"
     variation       2852
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:199624636"
     variation       2857
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:373683237"
     variation       2870
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:370989006"
     variation       2871
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:371269236"
     variation       2872
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:1057913"
     variation       2885
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:200585286"
     variation       2890
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:200822345"
     variation       2902
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:142720081"
     variation       2913
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:147351924"
     variation       2918
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:150988194"
     variation       2931
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:148436868"
     variation       2941
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:142570778"
     variation       2963
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:150949805"
     variation       2998
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:374660085"
     variation       3013
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:184181976"
     variation       3017
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:377373799"
     variation       3043
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:17855798"
     variation       3046
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:199928168"
     variation       3047
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:201652283"
     variation       3059
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:373891102"
     variation       3079
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:201131092"
     variation       3082
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:2303646"
     variation       3099
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:370676797"
     variation       3162
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:113710382"
     variation       3350
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:80251668"
     variation       3351
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:114341618"
     variation       3413
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:375556483"
     variation       3472
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:199826290"
     variation       3499
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:368481822"
     variation       3531
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:145123720"
     STS             3567..3758
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /standard_name="D5S1683E"
                     /db_xref="UniSTS:151072"
     variation       3640
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:372599031"
     variation       3661
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:188140091"
     STS             3746..3905
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /standard_name="RH15971"
                     /db_xref="UniSTS:21192"
     variation       3802
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:375520397"
     variation       3804
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:369541654"
     variation       3866
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:192374006"
     variation       3964
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:372931241"
     STS             4016..4740
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /standard_name="PCDHA4_1031"
                     /db_xref="UniSTS:277562"
     variation       4024
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:76323061"
     variation       4054
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:184389417"
     variation       4127
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:368526966"
     variation       4147
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:190585690"
     variation       4220..4221
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace=""
                     /replace="tc"
                     /db_xref="dbSNP:375099849"
     variation       4274
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:372712289"
     variation       4303
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:377766708"
     variation       4310
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:147601461"
     variation       4338
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:79928365"
     variation       4367
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:376703511"
     variation       4376
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:113270908"
     variation       4422
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:371069140"
     variation       4440
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:374038361"
     STS             4465..4639
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /standard_name="RH65516"
                     /db_xref="UniSTS:66009"
     variation       4467
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:73793552"
     variation       4468
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:31749"
     variation       4628
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:373724390"
     variation       4652
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace=""
                     /replace="t"
                     /db_xref="dbSNP:35545269"
     variation       4655
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:368774675"
     variation       4737
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:60692195"
     variation       4897
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:376660293"
     variation       4953
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:181852141"
     variation       4959
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:76856184"
     variation       4996
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:372303007"
     variation       5021
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:7701616"
     variation       5027
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:188955457"
     variation       5029..5032
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace=""
                     /replace="tatt"
                     /db_xref="dbSNP:145815294"
     variation       5031..5034
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace=""
                     /replace="ttta"
                     /db_xref="dbSNP:3038123"
     variation       5144
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:181445737"
     STS             5159..5420
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /standard_name="WI-19540"
                     /db_xref="UniSTS:63886"
     STS             5185..5413
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /standard_name="IB766"
                     /db_xref="UniSTS:42573"
     variation       5355
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:149179821"
     variation       5363
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:14615"
     variation       5403
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:186406635"
     variation       5438
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:369179929"
     variation       5471
                     /gene="PCDHAC1"
                     /gene_synonym="PCDH-ALPHA-C1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:189785800"
ORIGIN      
caatgccggcgttcgggaggcgcaacgtcggcggtcgctgagtatccagcccgcagcagtgacggccggcaggagcgtgctcttccccgcggctcgtgctctccaggagtccggagcatggtcctgggtcaccgttggtgtagcgtgttggtggaacgtggacgcctagagggaggatggtgggctgtggggtggcagttttatgtttgtgggtttcctgcggcgctgcagcgggacagctcgagtactcagtgccggaggagacggagcggggcgtagccgtaggcaatctctccgcggacttgaggctgccagcggccgctatgtcctcgcggaactttcgcttcctttccagccaccgcgagctctacttcggggtggatctacccagcggcaatttggtggtcagagagccggcggaccgcgaacagctgtgcagggccaaagctgcctgcgtcttgacctacgacctggtgctcgaggacccgctggagctgcacaagattcggattcacgtcctggacaccaatgacaactcacctctctttcctgccggcgacgtgcagctgcacatccccgagttcctgacgcccggagcccgctttactctcccgaatgcccaagatgacgacgagggaagcaatgggatactaagctacagcctaagccccagtcagcactttcgcctggacatgggatcgcgggttgacggcagcgaatacccggagttggtgttggagaaagcactggatcgcgaacagcgcgccacccacctgctggtgcttacagctcgggacggcgggctacctgcccgctcaggagacgcacaagtcaccatcattgtggtggacacaaatgacaacgcgcctgtatttgagcgctccgtataccgcaccaaggttccagagactgcacccaatgggactgtgttattccgagttcaagccttggatccagatgaagggtccaatggggaagtccagtactccctaagcaacagcacgcaagcagagctgcgacaccgctttcacgtgcaccctaaaagtggggaggtgcaagtagctgcttcactaggtccgcctgaaacgctcttggaggcatacattgaggcgagggacgaaggtgtctttggtttagctagcaccgctaaactgctggtggaggtgactgacgtgaacgatcatgcccccgaactggacttcctgactctttcgaacccagtacctgaggacgctgcccctggcacagtgattgctctctttagtgtaaaggatgaagacctcgattctaatggtagggtcatttgtggcatgtctagtgcaggcccttttcagctgacggcttcctttgacaactactacagcctgctgattgatgggcccctggaccgggagcagatcagtgaataccaagtcctgatcacggcctcagatagtggctcacccccacttagcacccgaaggacaatcactgtgtcagttgctgatgtgaatgacaatacaccaaactttcctcaaccccagcaggaacttttcgttgctgaaaacaatggccctggggcctctctaggccgagtgtttgcccaggaccccgacctggggaagaatggccttgtctcttatgagctgttggatgttatctctgaagggccatcagcctctagcttgctggcagtggaatcatccagtggggccatcactgccaaaacttcctttgactttgagcagctcagggggtttcatttccaagtagaaggccgggatggtggcattcctcccagaagtgcaacagtgactataaacttgtttgtggtagataggaatgacaattatccggttatcttgtttcccttgcccagaaatggttctgtcccagtggaaattgtgccccgctctgccaggactggacacttggtcacaaaagtggtagcagaggatgctgacagtggttctaatgcctggctttcctaccacatctcccgggcgtctgactctagtctctttagaatttcagccaatataggtgagctccgtactgctcgcttagttcttcccactgatgcagttaagcagagggtggtggtagtggttcgggaccatggagacccaccactttcctcctctgtcactctgggtgtgctgttgagcaactctgtccctcagttacttccagactttgaagatgtctgggaaccaggagggcagctttctgcccagaacttgtatttagtaattgccttggcttgtatttcctttttatttctggggtgcttacttttcttcgtgtgtaccaagttgcaccagagcccaggctgttgcgctcagagctgctgtcgctctacagaggatctgaggtatggaagtaagatggtttcaaatccttgcatgacatcagccaccatagatgtcactacagttgagagactttctcagacttatctctatcgggcctctctgggacttggttctgataataacagtttgctgttgcgtggggagtacaatgctgccgacctgcgaaatcttgccactggggtaggactgaatttgccaatatcctgtattcagattcggaataggaaaggggatcacgctaatgtcaatgccatgccacgacagcccaaccctgactggcgttactctgcctccctgagagcaggcatgcacagctctgtgcacctagaggaggctggcattctacgggctggtccaggagggcctgatcagcagtggccaacagtatccagtgcaacaccagaaccagaggcaggagaagtgtcccctccagtcggtgcgggtgtcaacagcaacagctggacctttaaatacggaccaggcaaccccaaacaatccggtcccggtgagttgcccgacaaattcattatcccaggatctcctgcaatcatctccatccggcaggagcctactaacagccaaattgacaaaagtgacttcataaccttcggcaaaaaggaggagaccaagaaaaagaagaaaaagaagaagggtaacaagacccaggagaaaaaagagaaagggaacagcacgactgacaacagtgaccagtgaggtcctcaaatggaaacaagccacttagccagtttttgtaataatggcaaatctctcccatgtagcaattccctgctcctttttcctatctacatgagccctcttagagacctcagaaatctgcagaaagttccctgtgtctgtctagaacgcatttaacaggttttgtcgtaaaagctttactaagtctggtgttaactctttctctccactctggcttgttttcagaacctaaaaagcagacccaagtttcctttctcctccgccgcaaaggagaggcttcccagccccgccagtgagaggttggactctctgccctgtgctccggggatcctgtcttgatgacacttgcagggcaggctgaaaagttttgagattgagcagcttgggagtttgtggccactgggtatgtgtggctaccgcgggtatgcgagtgccagatattggctgagacgagccagcttagactaattggtacaaggaaggcaagaaaacaaagacaaataaacagcggaagttatcagtatggaggggaagtgtaaacttaaagggaccagactttctaaatcttacaactcaagaggtggcagccaccctctaggagacaaaactacccccactgacaaggctttaggagaccctaaagtctgttggctgtgacgtcattatacctaaaatctgcatcatacctgcaagccaacagttcagtgttttaacagagaaccaccctgggaaacagaagcagatctgatgtgtttcctatacatgtcctgtgctcactttattaaaaattcttttgcacacaatgtttatgaaaaggccagatccttttccaatacttatgcaaaagcaaaagaaaaccccgacacctcacctttcgctgtttgttgtttcatagatttatttaaaaaaagagaaagtctatagctataaatctttaaagagaaatatgaatacaattcccctaaactctcctcaaaagagaattcagtctacagccatttaaatgatcattgctgctacagaagtgctttaagagaattgcctgaaacatctgtattatatcggccacctgccaatcacagctttactctttcaggtcactctggggctgcctcttgcatgtattactaaataaaatgatctctctttctctctctctctctcttttctaagaaacaattatgtgcactttgatacacaaccttctctaaccaactatatatcaagacccaaaaattgaagaaaaatattgttttctcatacagtgagcagatttttcaatctactaattctgtgacttgtcttggtgtgctagcctacaccttctctttggtttagttttccttttctataacactctgaattgctaatcttactaacacctatgatgttacctgaaatcaatctcccatatgtatgctgtatgctatgctaagactcctgaaatatacttactctgtgcttgtgtatgtgaatgttaatgcaactattacctagagtgaactttaagctttattgttgaatgtaattccattatatttccttttgtacacctgtgaaaaagtggagtagtgtttttttaaccattgttaatcagcttttgtgtatgaaagacacagtaaaatttctttcttaaatcaagatactggtgattcaaggaattttatttatggtccagccaagagccatctcgtgccaagacttctgctggcaagggaatggataaagctgttttgttctagtaacaattttggaatgaatactgacaatattccatgagggtgtgcaagcacaaattttaccaatctgacctctttgaagttgcagaatgctttgaaattctaatggtatctgaaatatcagctcatagaaagtaacaaaatttgctgtcaccttaaataagacattttaattttgttataatgtacaatttagaagtttgattaattatattatctatttaggcattaatataaaagaggtaggagtctgttatttaaaaaaagcattaaatttaaaaaaaaactgtcttgtctacttttagcttcattctcccatattttgaagggtgtgtaacttcagctctgcaggattgcatggggtaaaacttgttaccaacacatgtgaaccattgctacattgtaggttgtgatcattttgccccactgaagcccatgtatctgaccttacgtgccttttgaactaggagaatcgggctaatttattaatgatgataattataatgtatctgtacagcactttttacatttgcgaagtgctttccaatccatgttagttactagttattacagctgtaaggataaaacacgtcatgtggattcattttgaattggtgctattggtatttcctctgttattgctaataaatgaaaatggtggtatg
//

Annotations:

ANNOTATIONS from NCBI Entrez Gene (20130726):
            GeneID:56135 -> Molecular function: GO:0005509 [calcium ion binding] evidence: IEA
            GeneID:56135 -> Biological process: GO:0007155 [cell adhesion] evidence: TAS
            GeneID:56135 -> Biological process: GO:0007156 [homophilic cell adhesion] evidence: IEA
            GeneID:56135 -> Biological process: GO:0007399 [nervous system development] evidence: TAS
            GeneID:56135 -> Cellular component: GO:0005887 [integral to plasma membrane] evidence: TAS

by @meso_cacase at DBCLS
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