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2024-03-29 08:30:36, GGRNA : RefSeq release 60 (20130726)

LOCUS       NM_015169               1724 bp    mRNA    linear   PRI 17-APR-2013
DEFINITION  Homo sapiens RRS1 ribosome biogenesis regulator homolog (S.
            cerevisiae) (RRS1), mRNA.
ACCESSION   NM_015169
VERSION     NM_015169.3  GI:46094056
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1724)
  AUTHORS   Gambe,A.E., Matsunaga,S., Takata,H., Ono-Maniwa,R., Baba,A.,
            Uchiyama,S. and Fukui,K.
  TITLE     A nucleolar protein RRS1 contributes to chromosome congression
  JOURNAL   FEBS Lett. 583 (12), 1951-1956 (2009)
   PUBMED   19465021
  REMARK    GeneRIF: RNA interference experiments revealed that RRS1-depleted
            cells show abnormalities in chromosome alignment and spindle
            organization, which result in mitotic delay.
REFERENCE   2  (bases 1 to 1724)
  AUTHORS   Andersen,J.S., Lam,Y.W., Leung,A.K., Ong,S.E., Lyon,C.E.,
            Lamond,A.I. and Mann,M.
  TITLE     Nucleolar proteome dynamics
  JOURNAL   Nature 433 (7021), 77-83 (2005)
   PUBMED   15635413
REFERENCE   3  (bases 1 to 1724)
  AUTHORS   Scherl,A., Coute,Y., Deon,C., Calle,A., Kindbeiter,K.,
            Sanchez,J.C., Greco,A., Hochstrasser,D. and Diaz,J.J.
  TITLE     Functional proteomic analysis of human nucleolus
  JOURNAL   Mol. Biol. Cell 13 (11), 4100-4109 (2002)
   PUBMED   12429849
REFERENCE   4  (bases 1 to 1724)
  AUTHORS   Andersen,J.S., Lyon,C.E., Fox,A.H., Leung,A.K., Lam,Y.W., Steen,H.,
            Mann,M. and Lamond,A.I.
  TITLE     Directed proteomic analysis of the human nucleolus
  JOURNAL   Curr. Biol. 12 (1), 1-11 (2002)
   PUBMED   11790298
REFERENCE   5  (bases 1 to 1724)
  AUTHORS   Tsuno,A., Miyoshi,K., Tsujii,R., Miyakawa,T. and Mizuta,K.
  TITLE     RRS1, a conserved essential gene, encodes a novel regulatory
            protein required for ribosome biogenesis in Saccharomyces
            cerevisiae
  JOURNAL   Mol. Cell. Biol. 20 (6), 2066-2074 (2000)
   PUBMED   10688653
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            D25218.1 and BC001811.2.
            On Apr 2, 2004 this sequence version replaced gi:34147329.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC013043.2 [ECO:0000345]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1606              D25218.1           1-1606
            1607-1724           BC001811.2         1592-1709
FEATURES             Location/Qualifiers
     source          1..1724
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="8"
                     /map="8q13.1"
     gene            1..1724
                     /gene="RRS1"
                     /note="RRS1 ribosome biogenesis regulator homolog (S.
                     cerevisiae)"
                     /db_xref="GeneID:23212"
                     /db_xref="HGNC:17083"
                     /db_xref="HPRD:15277"
     exon            1..1706
                     /gene="RRS1"
                     /inference="alignment:Splign:1.39.8"
     variation       21
                     /gene="RRS1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:61731580"
     variation       33
                     /gene="RRS1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:375243098"
     variation       62
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:368205159"
     variation       67
                     /gene="RRS1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:200931864"
     variation       94
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:371967186"
     variation       96
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:201048399"
     variation       100
                     /gene="RRS1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:144911629"
     variation       102
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:371431459"
     CDS             105..1202
                     /gene="RRS1"
                     /note="homolog of yeast ribosome biogenesis regulatory
                     protein RRS1; ribosome biogenesis regulatory protein RRS1
                     homolog"
                     /codon_start=1
                     /product="ribosome biogenesis regulatory protein homolog"
                     /protein_id="NP_055984.1"
                     /db_xref="GI:14719402"
                     /db_xref="CCDS:CCDS6189.1"
                     /db_xref="GeneID:23212"
                     /db_xref="HGNC:17083"
                     /db_xref="HPRD:15277"
                     /translation="
MEGQSVEELLAKAEQDEAEKLQRITVHKELELQFDLGNLLASDRNPPTGLRCAGPTPEAELQALARDNTQLLINQLWQLPTERVEEAIVARLPEPTTRLPREKPLPRPRPLTRWQQFARLKGIRPKKKTNLVWDEVSGQWRRRWGYQRARDDTKEWLIEVPGNADPLEDQFAKRIQAKKERVAKNELNRLRNLARAHKMQLPSAAGLHPTGHQSKEELGRAMQVAKVSTASVGRFQERLPKEKVPRGSGKKRKFQPLFGDFAAEKKNQLELLRVMNSKKPQLDVTRATNKQMREEDQEEAAKRRKMSQKGKRKGGRQGPGGKRKGGPPSQGGKRKGGLGGKMNSGPPGLGGKRKGGQRPGGKRRK
"
     misc_feature    105..107
                     /gene="RRS1"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="N-acetylmethionine; propagated from
                     UniProtKB/Swiss-Prot (Q15050.2); acetylation site"
     misc_feature    192..686
                     /gene="RRS1"
                     /note="Ribosome biogenesis regulatory protein (RRS1);
                     Region: RRS1; pfam04939"
                     /db_xref="CDD:191135"
     variation       115
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:374676415"
     variation       116
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:3739334"
     variation       132
                     /gene="RRS1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:199546938"
     variation       189
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:375178198"
     variation       194
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:200355092"
     variation       219
                     /gene="RRS1"
                     /replace="a"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:116590536"
     variation       230
                     /gene="RRS1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:148041062"
     variation       234
                     /gene="RRS1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:140840609"
     variation       253
                     /gene="RRS1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:367878265"
     variation       282
                     /gene="RRS1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:11556131"
     variation       287
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:371751925"
     variation       415
                     /gene="RRS1"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:375781629"
     variation       448
                     /gene="RRS1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:369081320"
     variation       452
                     /gene="RRS1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:34077648"
     variation       481
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:3739335"
     variation       599
                     /gene="RRS1"
                     /replace=""
                     /replace="c"
                     /db_xref="dbSNP:35778787"
     variation       622
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:111453020"
     variation       624
                     /gene="RRS1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:377307457"
     variation       628
                     /gene="RRS1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:200841965"
     variation       676
                     /gene="RRS1"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:3739336"
     variation       734
                     /gene="RRS1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:34322476"
     variation       737
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:147364632"
     variation       769
                     /gene="RRS1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:137894990"
     variation       806
                     /gene="RRS1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:369563321"
     variation       815
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:3739337"
     variation       823
                     /gene="RRS1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:144403420"
     variation       826
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:148788428"
     variation       840
                     /gene="RRS1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:373983355"
     variation       903
                     /gene="RRS1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:144551617"
     variation       924
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:36125898"
     variation       951
                     /gene="RRS1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:139651821"
     variation       990
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:115935831"
     variation       994
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:200762868"
     variation       995
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:61747714"
     STS             1006..1171
                     /gene="RRS1"
                     /standard_name="RH25337"
                     /db_xref="UniSTS:86936"
     variation       1011
                     /gene="RRS1"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:200032631"
     variation       1066..1067
                     /gene="RRS1"
                     /replace=""
                     /replace="cct"
                     /db_xref="dbSNP:75916741"
     variation       1066
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:34974332"
     variation       1098
                     /gene="RRS1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:149763981"
     variation       1165
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:374511161"
     variation       1170
                     /gene="RRS1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:369943218"
     STS             1207..1532
                     /gene="RRS1"
                     /standard_name="D8S1606"
                     /db_xref="UniSTS:78726"
     STS             1211..1405
                     /gene="RRS1"
                     /standard_name="RH17390"
                     /db_xref="UniSTS:3436"
     variation       1215
                     /gene="RRS1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:202045199"
     variation       1218
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:200975585"
     variation       1279
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:73253611"
     variation       1484..1485
                     /gene="RRS1"
                     /replace=""
                     /replace="t"
                     /db_xref="dbSNP:148064947"
     variation       1494
                     /gene="RRS1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:3210185"
     variation       1513
                     /gene="RRS1"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:185815880"
     STS             1551..1653
                     /gene="RRS1"
                     /standard_name="G27361"
                     /db_xref="UniSTS:40409"
     variation       1612
                     /gene="RRS1"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:78595779"
     variation       1682
                     /gene="RRS1"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:190291349"
ORIGIN      
gcatcccggcatctgcacgtggttatgctgccggagtttgggccgccactgtaggaaaagtaacttcagctgcagccccaaagcgagtgagccgagccggagccatggagggccagagcgtggaggagctgctcgcaaaggcagagcaggacgaggcagagaagttgcaacgcatcacggtgcacaaggagctggagctgcagtttgacctgggcaacctgctggcgtcggaccggaaccccccgaccgggctgcggtgcgccggacccacgccggaggccgagctacaggccctggcgcgggacaacacgcaactgctcatcaaccagctgtggcagctgcccacggagcgcgtggaagaggcgatagtggcgcggctgccggagcccaccacacgcctgccgcgagagaagcctctgccccgaccgcggccacttacacgctggcagcagttcgcgcgcctcaagggcatccgtcccaagaagaagaccaacctggtgtgggacgaggtgagtggccagtggcggcggcgctggggctaccagcgcgcccgggacgacaccaaagaatggctgattgaggtgcccggcaatgccgaccccttggaggaccagttcgccaagcggattcaggccaagaaggaaagggtggccaagaacgagctgaaccggctgcgtaacctggcccgcgcgcacaagatgcagctgcccagcgcggccggcttgcaccctaccggacaccagagtaaggaggagctgggccgcgccatgcaagtggccaaggtctccaccgcctctgtggggcgctttcaggagcgcctccccaaggagaaggtgccccggggctccggcaagaaaaggaagtttcaaccccttttcggggactttgcagccgagaaaaagaaccagttggagctgcttcgtgtcatgaacagcaagaagcctcagctggatgtgactagggccaccaataagcagatgagggaggaggaccaggaggaggccgccaagaggaggaaaatgagccagaagggcaagagaaagggaggccggcaggggcctgggggcaagaggaaagggggcccgcccagccagggagggaagaggaaagggggcttgggaggcaagatgaattctgggccgcctggcttgggtggcaagagaaaaggaggacagcgcccaggaggaaagaggaggaagtaatagtttctaactgtcggacccgtctgtaaaccaaggactatgaatactaaatgttaagttctaggcaattatacggggactcagaaggacctggccgctgccttcattgagtttaaagggacaggattgcccttccgtcaagaaagtatgtaagtgttggactgcacaaattaatgtttttcccacaaccgagactttggagattaagaacttatttgaggatttaagaattagggaaataatttggtggaaaccgggaatgagttctattcttaaacagcctttttttttctttttaatgttggatatacggcgaggtagagttggccatatttcagagacttagattgacgtatatgtttctgcattatttttacaacaagtttgtgtatcagagcgggagtgcgggggagggaaagaaaacaaacagtttcagaattgaataggcaagtgactgttttaaagattaagtaataaagatgtcttatctagtgtgacttttaaaaaaaaaaaaaaaaaaaa
//

Annotations:

ANNOTATIONS from NCBI Entrez Gene (20130726):
            GeneID:23212 -> Molecular function: GO:0003674 [molecular_function] evidence: ND
            GeneID:23212 -> Biological process: GO:0007080 [mitotic metaphase plate congression] evidence: IMP
            GeneID:23212 -> Biological process: GO:0042254 [ribosome biogenesis] evidence: IEA
            GeneID:23212 -> Cellular component: GO:0000794 [condensed nuclear chromosome] evidence: IDA
            GeneID:23212 -> Cellular component: GO:0005730 [nucleolus] evidence: IDA
            GeneID:23212 -> Cellular component: GO:0005783 [endoplasmic reticulum] evidence: IEA

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