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2024-03-28 21:12:11, GGRNA : RefSeq release 60 (20130726)

LOCUS       NM_014857               3022 bp    mRNA    linear   PRI 26-MAY-2013
DEFINITION  Homo sapiens RAB GTPase activating protein 1-like (RABGAP1L),
            transcript variant 1, mRNA.
ACCESSION   NM_014857
VERSION     NM_014857.4  GI:344217730
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3022)
  AUTHORS   Kim,J.H., Jung,S.H., Bae,J.S., Lee,H.S., Yim,S.H., Park,S.Y.,
            Bang,S.Y., Hu,H.J., Shin,H.D., Bae,S.C. and Chung,Y.J.
  TITLE     Deletion variants of RABGAP1L, 10q21.3, and C4 are associated with
            the risk of systemic lupus erythematosus in Korean women
  JOURNAL   Arthritis Rheum. 65 (4), 1055-1063 (2013)
   PUBMED   23335107
  REMARK    GeneRIF: Deletion variants of RABGAP1L were found to be
            significantly associated with SLE in Korean women.
REFERENCE   2  (bases 1 to 3022)
  AUTHORS   Olson,J.E., Wang,X., Pankratz,V.S., Fredericksen,Z.S., Vachon,C.M.,
            Vierkant,R.A., Cerhan,J.R. and Couch,F.J.
  TITLE     Centrosome-related genes, genetic variation, and risk of breast
            cancer
  JOURNAL   Breast Cancer Res. Treat. 125 (1), 221-228 (2011)
   PUBMED   20508983
  REMARK    GeneRIF: Observational study of gene-disease association. (HuGE
            Navigator)
REFERENCE   3  (bases 1 to 3022)
  AUTHORS   Oguri,M., Kato,K., Yokoi,K., Yoshida,T., Watanabe,S., Metoki,N.,
            Yoshida,H., Satoh,K., Aoyagi,Y., Nozawa,Y. and Yamada,Y.
  TITLE     Assessment of a polymorphism of SDK1 with hypertension in Japanese
            Individuals
  JOURNAL   Am. J. Hypertens. 23 (1), 70-77 (2010)
   PUBMED   19851296
  REMARK    GeneRIF: Observational study of gene-disease association. (HuGE
            Navigator)
REFERENCE   4  (bases 1 to 3022)
  AUTHORS   Ishibashi,K., Kanno,E., Itoh,T. and Fukuda,M.
  TITLE     Identification and characterization of a novel Tre-2/Bub2/Cdc16
            (TBC) protein that possesses Rab3A-GAP activity
  JOURNAL   Genes Cells 14 (1), 41-52 (2009)
   PUBMED   19077034
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            DB087378.1, AK095838.2, AB449904.1, BC012094.1 and BG193682.1.
            On Aug 25, 2011 this sequence version replaced gi:78217385.
            
            Transcript Variant: This variant (1) contains novel exon structure
            at both its 5' and 3' ends, and thus differs in both UTRs and in
            the 5' and 3' coding regions, compared to variant 4. The encoded
            isoform (A) has distinct N- and C-termini, and is significantly
            longer than isoform C.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK095838.2 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           ERS025083, ERS025084 [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-130               DB087378.1         1-130
            131-1208            AK095838.2         28-1105
            1209-2725           AB449904.1         932-2448
            2726-3007           BC012094.1         491-772
            3008-3022           BG193682.1         397-411
FEATURES             Location/Qualifiers
     source          1..3022
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
                     /map="1q24"
     gene            1..3022
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /note="RAB GTPase activating protein 1-like"
                     /db_xref="GeneID:9910"
                     /db_xref="HGNC:24663"
                     /db_xref="MIM:609238"
     exon            1..244
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     variation       86
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:191678903"
     variation       91..92
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace=""
                     /replace="ctccc"
                     /db_xref="dbSNP:150254430"
     variation       133
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:372474719"
     variation       198
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:376978379"
     exon            245..415
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     variation       254
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:199622723"
     variation       267
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:2103640"
     variation       273
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:373434556"
     CDS             278..2725
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /note="isoform A is encoded by transcript variant 1; TBC1
                     domain family, member 18; expressed in hematopoietic
                     cells, heart, liver (HLL)"
                     /codon_start=1
                     /product="rab GTPase-activating protein 1-like isoform A"
                     /protein_id="NP_055672.3"
                     /db_xref="GI:78217386"
                     /db_xref="CCDS:CCDS1314.1"
                     /db_xref="GeneID:9910"
                     /db_xref="HGNC:24663"
                     /db_xref="MIM:609238"
                     /translation="
MEVRASLQKVSGSSDSVATMNSEEFVLVPQYADDNSTKHEEKPQLKIVSNGDEQLEKAMEEILRDSEKRPSSLLVDCQSSSEISDHSFGDIPASQTNKPSLQLILDPSNTEISTPRPSSPGGLPEEDSVLFNKLTYLGCMKVSSPRNEVEALRAMATMKSSSQYPFPVTLYVPNVPEGSVRIIDQSSNVEIASFPIYKVLFCARGHDGTTESNCFAFTESSHGSEEFQIHVFSCEIKEAVSRILYSFCTAFKRSSRQVSDVKDSVIPTPDSDVFTFSVSLEVKEDDGKGNFSPVPKDRDKFYFKLKQGIEKKVVITVQQLSNKELAIERCFGMLLSPGRNVKNSDMHLLDMESMGKSYDGRAYVITGMWNPNAPVFLALNEETPKDKQVYMTVAVDMVVTEVVEPVRFLLETVVRVYPANERFWYFSRKTFTETFFMRLKQSEGKGHTNAGDAIYEVVSLQRESDKEEPVTPTSGGGPMSPQDDEAEEESDNELSSGTGDVSKDCPEKILYSWGELLGKWHSNLGARPKGLSTLVKSGVPEALRAEVWQLLAGCHDNQAMLDRYRILITKDSAQESVITRDIHRTFPAHDYFKDTGGDGQESLYKICKAYSVYDEDIGYCQGQSFLAAVLLLHMPEEQAFCVLVKIMYDYGLRDLYRNNFEDLHCKFYQLERLMQEQLPDLHSHFSDLNLEAHMYASQWFLTLFTAKFPLCMVFHIIDLLLCEGLNIIFHVALALLKTSKEDLLQADFEGALKFFRVQLPKRYRAEENARRLMEQACNIKVPTKKLKKYEKEYQTMRESQLQQEDPMDRYKFVYL
"
     misc_feature    662..1033
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /note="GAPCenA Phosphotyrosine-binding (PTB) domain;
                     Region: GAPCenA; cd01211"
                     /db_xref="CDD:176287"
     misc_feature    order(662..691,779..832,845..853,863..889,914..940,
                     956..982,992..1033)
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /note="PTB core; other site"
                     /db_xref="CDD:176287"
     misc_feature    order(875..883,887..889,998..1000,1010..1012,1019..1021,
                     1031..1033)
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /note="peptide binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:176287"
     misc_feature    order(875..877,935..937,956..958)
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /note="phosphotyrosine binding site [chemical binding];
                     other site"
                     /db_xref="CDD:176287"
     misc_feature    1145..1543
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /note="Kinesin protein; Region: DUF3694; pfam12473"
                     /db_xref="CDD:193043"
     misc_feature    1688..1690
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphothreonine; propagated from
                     UniProtKB/Swiss-Prot (Q5R372.1); phosphorylation site"
     misc_feature    1715..1717
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q5R372.1); phosphorylation site"
     misc_feature    1745..1747
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q5R372.1); phosphorylation site"
     misc_feature    <1823..2533
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /note="GTPase-activating protein [General function
                     prediction only]; Region: COG5210"
                     /db_xref="CDD:34807"
     misc_feature    1898..2509
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /note="Rab-GTPase-TBC domain; Region: RabGAP-TBC;
                     pfam00566"
                     /db_xref="CDD:201311"
     variation       320
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:147580824"
     variation       358
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:141470344"
     variation       369
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:145032473"
     variation       373
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:138791107"
     exon            416..608
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     variation       475
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:140528551"
     variation       476
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:138469250"
     variation       511
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:17854182"
     variation       517
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:201091388"
     variation       534
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:199921822"
     variation       580
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:201854323"
     variation       598
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:189440280"
     exon            609..819
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     variation       642..643
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace=""
                     /replace="c"
                     /db_xref="dbSNP:34416766"
     variation       660
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:374978225"
     variation       668
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:367685627"
     variation       714
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:201323511"
     variation       760
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:370425662"
     variation       766
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:200402801"
     variation       783
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:372332127"
     variation       802
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:376043803"
     variation       810
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:368590454"
     exon            820..994
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     variation       830
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:368672299"
     variation       832
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:200126832"
     variation       841
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:142743501"
     variation       867
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:143661013"
     variation       883
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:140628487"
     variation       906
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:138264771"
     variation       940
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:376064634"
     variation       949
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:144504710"
     variation       989
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:371333673"
     variation       990
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:373653316"
     exon            995..1152
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     variation       1032
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:148341321"
     variation       1033
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:147517172"
     variation       1035
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:377226119"
     variation       1076
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:201387814"
     variation       1080
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:368432186"
     variation       1084
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:142774633"
     variation       1085
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:371240194"
     variation       1106
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:7339904"
     variation       1107
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:143354894"
     variation       1120
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:146737785"
     variation       1122
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:375652492"
     variation       1130
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:200430317"
     exon            1153..1263
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     variation       1176
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:151025740"
     variation       1210
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:140942610"
     exon            1264..1330
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     exon            1331..1433
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     variation       1342
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:202068518"
     variation       1344
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:12724520"
     variation       1392
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:141892306"
     variation       1411
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:199535098"
     variation       1415
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:12724656"
     exon            1434..1600
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     variation       1498
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:369535967"
     variation       1507
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:138510261"
     variation       1508
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:148684223"
     variation       1570
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:201532986"
     variation       1579
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:17854181"
     exon            1601..1742
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     variation       1623
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:142728115"
     variation       1640
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:370068818"
     variation       1662
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:373960756"
     variation       1672
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:199975855"
     variation       1679
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:377380635"
     variation       1701
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:142260750"
     exon            1743..1836
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     variation       1773
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:377531997"
     variation       1775
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:201974181"
     variation       1809
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:370164900"
     variation       1830..1831
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace=""
                     /replace="a"
                     /db_xref="dbSNP:35176576"
     exon            1837..1987
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     variation       1857
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:147972067"
     variation       1860
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:150517419"
     variation       1867
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:182025880"
     variation       1874
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:146229419"
     variation       1877
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:371618472"
     variation       1904
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:374115211"
     variation       1908
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:367655060"
     variation       1961
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:201615958"
     variation       1969
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:201455300"
     variation       1971
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:371880631"
     exon            1988..2101
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     variation       2005
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:370651815"
     variation       2038
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:140750799"
     variation       2074
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:112915481"
     variation       2077
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:61747504"
     exon            2102..2176
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     variation       2120
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:145274426"
     variation       2131
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:368229419"
     variation       2168
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:74126862"
     exon            2177..2302
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     variation       2251
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:141447470"
     variation       2257
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:139844710"
     exon            2303..2446
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     variation       2323
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:147255156"
     variation       2427
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:201949597"
     exon            2447..2488
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     exon            2489..2617
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     variation       2581
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:149852136"
     variation       2585
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:368502977"
     variation       2602
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:199639499"
     variation       2613
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:199733197"
     exon            2618..2710
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     variation       2624
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:369879598"
     variation       2653
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:373000781"
     variation       2693
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:201224754"
     variation       2710
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:148197893"
     exon            2711..3010
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /inference="alignment:Splign:1.39.8"
     STS             2849..3007
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /standard_name="SHGC-75933"
                     /db_xref="UniSTS:75349"
     variation       2895
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:115619969"
     variation       2980
                     /gene="RABGAP1L"
                     /gene_synonym="HHL; RP1-102G20.1; TBC1D18"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:373145677"
ORIGIN      
tggacgagcgcgcttccgacccgccgccaccgcctcctcccctccttctcggcccgccccctccctcgcctcttcctgccaggcggcccttctcccctcccctctcagttccctccgccctcctcgggctccagcggtggcggagcgaacgggaccggcccggcttcagagcgcgaggtggagggtggaacgcgggcgcctgaaggagttgttgtctcggcagcgcccgcggagacgtgaagaggtggttgtgggaagagaagtttgcagaactgaaatggaggtcagagcttcattacagaaggttagtggatcatctgattctgtggctacaatgaacagtgaagaatttgttttggttcctcagtatgcagatgataattctacaaaacatgaagaaaaacctcaactgaagatagtttctaatggtgatgaacaattggaaaaagccatggaagagattttgagagattccgagaaaaggccaagcagtcttcttgttgattgtcaaagttccagtgagatttcagaccattcgtttggagatattccagccagccaaacaaataagccatctcttcagttaattttggatccgtctaacacagaaatttctacacccagaccatcttctccaggtggactacctgaagaagatagtgttttatttaataaactgacctacttaggatgtatgaaggtttcttccccacgtaatgaagtagaggctttacgggcaatggcaaccatgaaatcttccagtcaatacccctttcctgttaccctgtatgtaccaaatgttccagaaggttctgtgagaattatagaccaatccagcaatgtggagatagcatcttttccaatctataaggtgttattctgtgcacgtggacatgacggaacaacagagagcaattgctttgcatttacagagagttcccatggttcggaagaatttcagatacatgttttctcctgtgaaattaaagaggcagtaagcagaattttgtacagtttctgtacagcattcaaacgttcttccagacaagtgtctgatgttaaagactcagttattcctacccccgacagtgatgtgtttaccttcagtgtctccttggaggtaaaagaagacgatggaaaaggaaactttagccctgtgcctaaggatagagataaattttatttcaaattaaagcaaggaatagagaagaaggttgtgattacagtgcagcaactttctaacaaagaattagctattgaaagatgttttggaatgttattaagcccaggtcgaaacgtgaagaacagtgacatgcatttactggatatggaatccatgggaaagagctatgatgggagagcttatgtcatcactggcatgtggaaccccaatgcaccagtatttctggcacttaacgaggaaaccccaaaagataagcaagtatacatgactgtggcagtggatatggtagtcacagaggtggtggagcctgttcgctttctcctggagacagtagtccgtgtgtaccctgcaaatgagcgattttggtatttcagcagaaagactttcacagagactttcttcatgagattgaaacagtctgagggaaaaggccataccaatgctggagatgcaatatatgaggtggtgagtctacagcgagagtctgacaaggaggaaccagtcactcctactagtggagggggtccaatgtcaccccaggatgatgaagcagaagaggagagtgataatgaactctcaagtggaacaggtgatgtgtctaaggattgtcctgagaagatcctgtattcttggggagagttgctaggaaaatggcacagtaaccttggtgcacgaccgaaagggctgtctactctggtgaagagtggtgtccctgaagcattgagggcagaggtatggcagttattggcaggctgccatgacaaccaggcaatgctggatagataccgaattcttatcacaaaggactcagcccaggagagtgttattactcgagatattcatcgtacatttcccgcacatgattactttaaagatactggaggagatggtcaagaatcgctctataagatctgcaaggcctactctgtgtatgatgaagacattgggtactgtcaagggcagtcttttcttgctgctgtattactgctgcatatgccagaggaacaagcattctgtgttttggtgaaaatcatgtacgactatggtttgagagacctctacagaaacaacttcgaagatcttcattgcaaattctaccagttggagagactaatgcaggaacagctaccggacctgcatagccatttttctgatctgaacctggaagctcatatgtatgcatcccagtggtttctcactctttttactgccaagttcccactctgcatggtgttccacatcattgacttactgctttgtgagggtttgaacataatctttcatgtagctttggctctcctaaagacctcaaaggaagaccttctgcaggctgattttgaaggtgctttaaagttctttagagttcagcttccaaagagatacagggcagaggaaaatgcaagaagactgatggagcaggcttgcaatattaaagtaccaaccaagaagctgaagaaatatgagaaagaatatcagacaatgcgagagagtcagctgcaacaggaagacccaatggatagatacaagtttgtatatttgtaggtaactccagctgttgcatttatactgggaatcttcataagaagctgagagaaagagaggggaaaaagaaagtggctttctactttcaaaaatgaaacaaaaaggaaaaatggcaaagtactgttttagctgtgcatgtcatatccacaaagacttttagcaggtgaactgttccaagactgacacaaggatgtttcaaacttgcctctgtctgtagaaaatgttaaaaataccaactcacttggaaggaaaaataaaaatcacaaaggtatattgagcacagtaaaaaaaaaaaaa
//

Annotations:

ANNOTATIONS from NCBI Entrez Gene (20130726):
            GeneID:9910 -> Molecular function: GO:0005097 [Rab GTPase activator activity] evidence: IDA
            GeneID:9910 -> Molecular function: GO:0017137 [Rab GTPase binding] evidence: IDA
            GeneID:9910 -> Biological process: GO:0032851 [positive regulation of Rab GTPase activity] evidence: IDA
            GeneID:9910 -> Biological process: GO:0032880 [regulation of protein localization] evidence: IDA
            GeneID:9910 -> Cellular component: GO:0005634 [nucleus] evidence: IDA
            GeneID:9910 -> Cellular component: GO:0005769 [early endosome] evidence: IDA
            GeneID:9910 -> Cellular component: GO:0005794 [Golgi apparatus] evidence: IDA

by @meso_cacase at DBCLS
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