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2024-03-28 18:23:59, GGRNA : RefSeq release 60 (20130726)

LOCUS       NM_014781               6670 bp    mRNA    linear   PRI 17-APR-2013
DEFINITION  Homo sapiens RB1-inducible coiled-coil 1 (RB1CC1), transcript
            variant 1, mRNA.
ACCESSION   NM_014781
VERSION     NM_014781.4  GI:134304841
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 6670)
  AUTHORS   Gammoh,N., Florey,O., Overholtzer,M. and Jiang,X.
  TITLE     Interaction between FIP200 and ATG16L1 distinguishes ULK1
            complex-dependent and -independent autophagy
  JOURNAL   Nat. Struct. Mol. Biol. 20 (2), 144-149 (2013)
   PUBMED   23262492
  REMARK    GeneRIF: Interaction between FIP200 and ATG16L1 distinguishes ULK1
            complex-dependent and -independent autophagy.
REFERENCE   2  (bases 1 to 6670)
  AUTHORS   Hama,Y., Chano,T., Inui,T., Matsumoto,K. and Okabe,H.
  TITLE     Preparation of mouse monoclonal antibody for RB1CC1 and its
            clinical application
  JOURNAL   PLoS ONE 7 (3), E32052 (2012)
   PUBMED   22396748
  REMARK    GeneRIF: analysis of preparation of the monoclonal antibody for
            RB1CC1
REFERENCE   3  (bases 1 to 6670)
  AUTHORS   Nishimura,I., Chano,T., Kita,H., Matsusue,Y. and Okabe,H.
  TITLE     RB1CC1 protein suppresses type II collagen synthesis in
            chondrocytes and causes dwarfism
  JOURNAL   J. Biol. Chem. 286 (51), 43925-43932 (2011)
   PUBMED   22049074
  REMARK    GeneRIF: RB1CC1 protein suppresses type II collagen synthesis in
            chondrocytes and causes dwarfism
REFERENCE   4  (bases 1 to 6670)
  AUTHORS   Koinuma,D., Shinozaki,M., Nagano,Y., Ikushima,H., Horiguchi,K.,
            Goto,K., Chano,T., Saitoh,M., Imamura,T., Miyazono,K. and
            Miyazawa,K.
  TITLE     RB1CC1 protein positively regulates transforming growth factor-beta
            signaling through the modulation of Arkadia E3 ubiquitin ligase
            activity
  JOURNAL   J. Biol. Chem. 286 (37), 32502-32512 (2011)
   PUBMED   21795712
  REMARK    GeneRIF: RB1CC1 thus appears to play a unique role as a modulator
            of TGF-beta signaling by restricting substrate specificity of
            Arkadia.
REFERENCE   5  (bases 1 to 6670)
  AUTHORS   Xu,B., Roos,J.L., Dexheimer,P., Boone,B., Plummer,B., Levy,S.,
            Gogos,J.A. and Karayiorgou,M.
  TITLE     Exome sequencing supports a de novo mutational paradigm for
            schizophrenia
  JOURNAL   Nat. Genet. 43 (9), 864-868 (2011)
   PUBMED   21822266
  REMARK    Publication Status: Online-Only
REFERENCE   6  (bases 1 to 6670)
  AUTHORS   Chano,T., Kontani,K., Teramoto,K., Okabe,H. and Ikegawa,S.
  TITLE     Truncating mutations of RB1CC1 in human breast cancer
  JOURNAL   Nat. Genet. 31 (3), 285-288 (2002)
   PUBMED   12068296
  REMARK    GeneRIF: RB1CC1 is frequently mutated in breast cancer and shows
            characteristics of a classical tumor-suppressor gene.
REFERENCE   7  (bases 1 to 6670)
  AUTHORS   Chano,T., Ikegawa,S., Saito-Ohara,F., Inazawa,J., Mabuchi,A.,
            Saeki,Y. and Okabe,H.
  TITLE     Isolation, characterization and mapping of the mouse and human
            RB1CC1 genes
  JOURNAL   Gene 291 (1-2), 29-34 (2002)
   PUBMED   12095676
REFERENCE   8  (bases 1 to 6670)
  AUTHORS   Chano,T., Ikegawa,S., Kontani,K., Okabe,H., Baldini,N. and Saeki,Y.
  TITLE     Identification of RB1CC1, a novel human gene that can induce RB1 in
            various human cells
  JOURNAL   Oncogene 21 (8), 1295-1298 (2002)
   PUBMED   11850849
REFERENCE   9  (bases 1 to 6670)
  AUTHORS   Ueda,H., Abbi,S., Zheng,C. and Guan,J.L.
  TITLE     Suppression of Pyk2 kinase and cellular activities by FIP200
  JOURNAL   J. Cell Biol. 149 (2), 423-430 (2000)
   PUBMED   10769033
REFERENCE   10 (bases 1 to 6670)
  AUTHORS   Maucuer,A., Camonis,J.H. and Sobel,A.
  TITLE     Stathmin interaction with a putative kinase and coiled-coil-forming
            protein domains
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 92 (8), 3100-3104 (1995)
   PUBMED   7724523
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence was derived from DA326842.1, BC017556.1,
            AC113139.2, AC090814.2 and AB059622.1.
            This sequence is a reference standard in the RefSeqGene project.
            On Mar 30, 2007 this sequence version replaced gi:41350194.
            
            Summary: The protein encoded by this gene interacts with signaling
            pathways to coordinately regulate cell growth, cell proliferation,
            apoptosis, autophagy, and cell migration. This tumor suppressor
            also enhances retinoblastoma 1 gene expression in cancer cells.
            Alternative splicing results in multiple transcript variants
            encoding distinct isoforms. [provided by RefSeq, Nov 2009].
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data because no single transcript matching the
            genomic sequence was available for the full length of the gene. The
            extent of this transcript is supported by transcript alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB059622.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           ERS025084 [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-436               DA326842.1         1-436
            437-1258            BC017556.1         1-822
            1259-1259           AC113139.2         136991-136991
            1260-4736           BC017556.1         824-4300
            4737-4737           AC090814.2         141790-141790       c
            4738-5225           BC017556.1         4302-4789
            5226-6670           AB059622.1         5192-6636
FEATURES             Location/Qualifiers
     source          1..6670
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="8"
                     /map="8q11"
     gene            1..6670
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /note="RB1-inducible coiled-coil 1"
                     /db_xref="GeneID:9821"
                     /db_xref="HGNC:15574"
                     /db_xref="MIM:606837"
     exon            1..392
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     exon            393..507
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     exon            508..629
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     misc_feature    550..552
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /note="upstream in-frame stop codon"
     CDS             559..5343
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /note="isoform 1 is encoded by transcript variant 1; 200
                     kDa FAK family kinase-interacting protein; RB1-inducible
                     coiled-coil protein 1; FAK family kinase-interacting
                     protein of 200 kDa"
                     /codon_start=1
                     /product="RB1-inducible coiled-coil protein 1 isoform 1"
                     /protein_id="NP_055596.3"
                     /db_xref="GI:134304842"
                     /db_xref="CCDS:CCDS34892.1"
                     /db_xref="GeneID:9821"
                     /db_xref="HGNC:15574"
                     /db_xref="MIM:606837"
                     /translation="
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQLALEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQSIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEDSEKAEMKRSTELVLSPDMPRTTNESLLTSFPKSVEHVSPDTADAESGKEIRESCQSTVHQQDETTIDTKDGDLPFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKAIKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQKRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLFRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASVSQTSPQSASSPRMESTAGITTTTSPRTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDLDSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTNVCGKEDFGDHTSLNVQLERCRVVAQDSHFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCTAVEIRNIIEKVKCSLEITLKEKHQKELLSLKNEYEGKLDGLIKETEENENKIKKLKGELVCLEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHSQNCEIKELKQSREIVLEDLKKLHVENDEKLQLLRAELQSLEQSHLKELEDTLQVRHIQEFEKVMTDHRVSLEELKKENQQIINQIQESHAEIIQEKEKQLQELKLKVSDLSDTRCKLEVELALKEAETDEIKILLEESRAQQKETLKSLLEQETENLRTEISKLNQKIQDNNENYQVGLAELRTLMTIEKDQCISELISRHEEESNILKAELNKVTSLHNQAFEIEKNLKEQIIELQSKLDSELSALERQKDEKITQQEEKYEAIIQNLEKDRQKLVSSQEQDREQLIQKLNCEKDEAIQTALKEFKLEREVVEKELLEKVKHLENQIAKSPAIDSTRGDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKLEEEVSKLRSSSFVPSPYVATAPELYGACAPELPGESDRSAVETADEGRVDSAMETSMMSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
"
     misc_feature    1195..1197
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="phosphorylation site"
     misc_feature    1267..1269
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8TDY2.3); phosphorylation site"
     misc_feature    1267..1269
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="phosphorylation site"
     misc_feature    1270..1272
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="phosphorylation site"
     misc_feature    1285..1287
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8TDY2.3); phosphorylation site"
     misc_feature    1327..1329
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8TDY2.3); phosphorylation site"
     misc_feature    2167..2169
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="phosphorylation site"
     misc_feature    2254..2265
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="non-experimental evidence, no additional
                     details recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (Q8TDY2.3);
                     Region: Nuclear localization signal (Potential)"
     misc_feature    2428..2430
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8TDY2.3); phosphorylation site"
     misc_feature    2497..2499
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8TDY2.3); phosphorylation site"
     misc_feature    2515..2517
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q8TDY2.3); phosphorylation site"
     misc_feature    4909..5328
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /note="Autophagy-related protein 11; Region: ATG11;
                     pfam10377"
                     /db_xref="CDD:192560"
     exon            630..756
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     exon            757..927
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     exon            928..1130
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     exon            1131..1560
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     variation       1366
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:34252496"
     exon            1561..1731
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     variation       1609
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:35228276"
     variation       1611
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:35009616"
     variation       1641
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:34419732"
     exon            1732..1916
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     variation       1824
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:34208925"
     exon            1917..2103
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     exon            2104..2185
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     exon            2186..2247
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     exon            2248..2351
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     exon            2352..2478
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     exon            2479..4379
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     variation       2619
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:35764642"
     variation       2681
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:34016926"
     STS             3485..3605
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /standard_name="RH12077"
                     /db_xref="UniSTS:66917"
     variation       4205
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:35534432"
     exon            4380..4545
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     variation       4500
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:34701924"
     exon            4546..4654
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     exon            4655..4895
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     variation       4737
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:2305427"
     variation       4829
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:35342973"
     exon            4896..4950
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     exon            4951..4998
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     exon            4999..5057
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     exon            5058..5194
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     exon            5195..5265
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     variation       5226
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1129660"
     exon            5266..6667
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /inference="alignment:Splign:1.39.8"
     STS             5383..5507
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /standard_name="WI-13801"
                     /db_xref="UniSTS:32585"
     STS             5732..5878
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /standard_name="A006G21"
                     /db_xref="UniSTS:7330"
     STS             5732..5878
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /standard_name="G20788"
                     /db_xref="UniSTS:7329"
     variation       5797
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:34711632"
     STS             5808..5909
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /standard_name="WI-15400"
                     /db_xref="UniSTS:41408"
     STS             5889..6014
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /standard_name="RH78347"
                     /db_xref="UniSTS:76864"
     variation       5992
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:34078703"
     variation       6030
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:35562098"
     variation       6059
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:14740"
     STS             6065..6168
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /standard_name="A007F23"
                     /db_xref="UniSTS:19199"
     polyA_signal    6217..6222
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
     polyA_site      6238
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
     STS             6278..6476
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /standard_name="RH25416"
                     /db_xref="UniSTS:79619"
     STS             6290..6492
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /standard_name="D8S2116"
                     /db_xref="UniSTS:22175"
     STS             6426..6505
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
                     /standard_name="WI-19524"
                     /db_xref="UniSTS:74989"
     polyA_signal    6508..6513
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
     polyA_site      6532
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
     polyA_signal    6646..6651
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
     polyA_site      6667
                     /gene="RB1CC1"
                     /gene_synonym="CC1; FIP200"
ORIGIN      
gtttcccggcatgcgccgcggaggaagagacggagtcgacaataacaaaccaagccgcggcggtgtccgcggccctgccgagccctcggcgttgcctcagaatcccccagtcgcctgggcccctcggctctgacaggccgcggccttctgtcccccggccccagacccagagccgaggggcctgctcgcgtccttgtccgcccggacccctccctgcctcctagagttcggggccgcggcgggcgggcgcccgggacgccggcggttgtgtcggcttagcggtgccgaatgggcggttggtaaccgctgccgaggactaggcggcggcggaagatggtgccgggggtcgctggctctgctgctgccgccggcgaaggaggaggcgttgccggttttctgagtttaaccagtaatgccattcagttgccaatctcaagcaaagcaaacataagccagttttaatctactttttaagaaaagtggtagtccttttcacagtgcctgacgtaactgtatcagagggtgaggtataagctcacagaattcagataaatcatcatgaagttatatgtatttctggttaacactggaactactctaacatttgacactgaacttacagtgcaaactgtggcagaccttaagcatgccattcaaagcaaatacaagattgctattcaacaccaggtgctggtggtcaatggaggagaatgcatggctgcagatcgaagagtgtgtacctacagtgctgggacggatacaaatccaatttttctttttaacaaagaaatgatcttatgtgatcgtccacctgctattcctaaaactaccttttcgacagaaaatgacatggaaataaaagttgaagaatctcttatgatgcctgcagtttttcatactgttgcttcaaggacacagcttgcattggaaatgtatgaagttgccaagaaactttgttctttttgtgaaggtcttgtacatgatgaacatcttcaacaccaaggctgggctgcaatcatggccaacctggaggactgttcaaattcataccaaaagctacttttcaagtttgaaagtatttattcaaattatctgcagtccatagaagacatcaagttaaaacttactcatttaggaactgcagtttcagtaatggccaagattccactgttggagtgcctaaccagacatagttacagagaatgtttgggaagactggattctttacctgaacatgaagactcagaaaaagctgagatgaaaagatccactgaactggtgctctctcctgatatgcctagaacaactaacgaatctttgttaacctcatttcccaagtcagtggaacatgtgtccccagataccgcagatgctgaaagtggcaaagaaattagggaatcttgtcaaagtactgttcatcagcaagatgaaactacgattgacactaaagatggtgatctgcccttttttaatgtctctttgttagactggataaatgttcaagatagacctaatgatgtggaatctttggtcaggaagtgctttgattctatgagcaggcttgatccaaggattattcgaccatttatagcagaatgccgtcaaactattgccaaacttgataatcagaatatgaaagccattaaaggacttgaagatcggctctacgccctggaccagatgattgctagctgtggccgactggtgaatgaacagaaagagcttgctcagggatttttagctaatcagaagagagctgaaaacttaaaggatgcatctgtattacctgatttatgcctgagtcacgcaaatcagttgatgattatgttgcaaaatcatagaaaactgttagatattaagcagaagtgtaccactgccaaacaagaactagcaaataacctacatgtcagactgaagtggtgttgctttgtaatgcttcatgctgatcaagatggagagaagttacaagctttgctccgcctcgtaatagagctgttagaaagagtcaaaattgttgaagctcttagtacagttcctcagatgtactgcttagctgttgttgaggttgtaagaagaaaaatgttcataaaacactacagggagtgggctggtgctttagtcaaagatggaaagagattatatgaagcagaaaaatcaaaaagggaatcctttgggaaattatttaggaagtcttttttaagaaatcgtctgtttaggggactggactcctggcccccttccttttgtactcaaaagcctcgaaagtttgactgtgaacttccagatatttcattaaaagatttacagtttctgcaatcattttgtccttcggaagttcagccattcctcagggttcccttactttgtgactttgaacctctacaccagcatgtacttgctctacataatttggtaaaagcagcacaaagtttggatgaaatgtcacagaccattacagatctactgagtgaacaaaaggcatctgtgagtcagacatccccacagtctgcttcttcaccaaggatggaaagtacagcaggaattacaactactacctcaccgagaactcctccaccactgactgttcaggatcccttatgtcctgcagtttgtcccttagaagaattatctccagatagtattgatgcacatacgtttgattttgaaactattccccatccaaacatagaacagactattcaccaagtttctttagacttggattcattagcagaaagtcctgaatcagattttatgtctgctgtgaatgagtttgtaatagaagaaaatttgtcgtctcctaatcctataagtgatccacaaagcccagaaatgatggtggaatcactttattcatcagttatcaatgcgatagacagtagacgaatgcaggatacaaatgtatgtggtaaggaggattttggagatcatacttctctgaatgtccagttggaaagatgtagagttgttgcccaagactctcacttcagtatacaaaccattaaggaagacctttgccactttagaacatttgtacaaaaagaacagtgtgacttctcaaattcattaaaatgtacagcagtagaaataagaaacattattgaaaaagtaaaatgttctctggaaataacactaaaagaaaaacatcaaaaagaactactgtctttaaaaaatgaatatgaaggtaaacttgacggactaataaaggaaactgaagagaatgaaaacaaaattaaaaaattgaagggagagttagtatgccttgaggaggttttacaaaataaagataatgaatttgctttggttaaacatgaaaaagaagctgtaatctgcctgcagaatgaaaaggatcagaagttgttagagatggaaaatataatgcactctcaaaattgtgaaattaaagaactgaagcagtcacgagaaatagtgttagaagacttaaaaaagctccatgttgaaaatgatgagaagttacagttattgagggcagaacttcagtccttggagcaaagtcatctaaaggaattagaggacacacttcaggttaggcacatacaagagtttgagaaggttatgacagaccacagagtttctttggaggaattaaaaaaggaaaaccaacaaataattaatcaaatacaagaatctcatgctgaaattatccaggaaaaagaaaaacagttacaggaattaaaactcaaggtttctgatttgtcagacacgagatgcaagttagaggttgaacttgcgttgaaggaagcagaaactgatgaaataaaaattttgctggaagaaagcagagcccagcagaaggagaccttgaaatctcttcttgaacaagagacagaaaatttgagaacagaaattagtaaactcaaccaaaagattcaggataataatgaaaattatcaggtgggcttagcagagctaagaactttaatgacaattgaaaaagatcagtgtatttccgagttaattagtagacatgaagaagaatctaatatacttaaagctgaattaaacaaagtaacatctttgcataaccaagcatttgaaatagaaaaaaacctaaaagaacaaataattgaactgcagagtaaattggattcagaattgagtgctcttgaaagacaaaaagatgaaaaaattacccaacaagaagagaaatacgaagctattatccagaaccttgagaaagacagacaaaaattggtcagcagccaggagcaagacagagaacagttaattcagaagcttaattgtgaaaaagatgaagctattcagactgccctaaaagaatttaaattggagagagaagttgttgagaaagagttattagaaaaagttaaacatcttgagaatcaaatagcaaaaagtcctgccattgactctaccagaggagattcttcaagcttagttgctgaacttcaagaaaagcttcaggaagaaaaagctaagtttctagaacaacttgaagagcaagaaaaaagaaagaatgaagaaatgcaaaatgttcgaacatctttgattgcggaacaacagaccaattttaacactgttttaacaagagagaaaatgagaaaagaaaacataataaatgatcttagtgataagttgaaaagtacaatgcagcaacaagaacgggataaagatttgatagagtcactttctgaagatcgagctcgtttgcttgaggaaaagaaaaagcttgaagaagaagtcagtaagttgcgtagtagcagttttgttccttcaccatatgtagctacagccccagaactttatggagcttgtgcacctgaactcccaggtgaatcagatagatccgctgtggaaacagcagatgaaggaagagtggattcagcaatggagacaagcatgatgtctgtacaagaaaatattcatatgttgtctgaagaaaaacagcggataatgctgttagaacgaacattgcaattgaaagaagaagaaaataaacggttaaatcaaagactgatgtctcagagcatgtcttcagtatcttcaaggcattctgaaaagatagctattagagattttcaggtgggagatttggtactcatcatcctagacgaacgccatgacaattatgtgttatttactgttagtcctactttatattttctacattcagagtctctacctgccctggatctcaaaccaggtgagggtgcttcaggtgcatctagaagaccctgggtacttggaaaagtaatggaaaaagaatactgtcaagccaaaaaggcacaaaacagatttaaagttcctttggggacaaagttttacagagtgaaagccgtatcatggaataagaaagtataacttatggacaaaattaatacattctatgacatttttttctgatttgtcctgcagtgctcattcatcactccaaaaacagcaggccatctttttatgcaaaagtcagcgtgacaatatacttcactggtgtacatcgtttactttttaactggcttcattttaggaataataaattcatcagaatccttggctgaattaaaatggtttttgttttttggtttttttttttacccagacaactctagaaatgcggaccaaactacttcattttctcaaagggcataccttgtgcattgtggcttatgatgagccatattaattgcctgttaaatatacactagcttgaacttagatgttaaatgttattattaccagcatttgtccttttgtgaaatcagtatcagaatacttgcactctttaacacattctttataaaatgtataaattattcagaactatttaaaataaagaggagtgttattgcatgctgataatcattttgagtttgcctcagtagatactaaagcaaattgtttcagtttttttaaatgccctttgatgtttcaaaaaaaaaaaggaactgtaatttgattgactgattttaagatcagccataagtaatcagcaatcttcaaaagcactttcagtggattggtcatctgggttctaaagggaagagtctgtgctactaaccatttcaaatgcagactcaaaccttcccaacatctttatgactctagaataatcatattgatgaaatcgtaattcatggttgagtttcagaacaaaagatattcattgcacattaaccatttagaggtcatttaaataacaaaatattgtattgtaaaagaactgtacaattttaaaacaataaagatttgaacctgtaaatgtgtgtgccttttaaagaaggatacatttttaatatatttgagtgattgctgggaagtgtgaaaatattgttatgtatcatatcaaagagaaacatgtttattacaaaaatgttctttaactatatactatgtaacagggtaaacagtgttatgtagaatagaattgtgtaaactagatctttagagaagttgccattgagcaaagttatttaaatgagttagttgagttggatgagaattgtttgaggtttgttgctagagaacaataataaaataattctttttcagaaaatatttaatttcttcataaaaataagttaaatatttttttaaatatgtatatctaatagtacaaaatggaataaacatcatagtgtatagaaaactgaatttgacaagttaatgaataaatgaacaaatgatttcaaaa
//

Annotations:

ANNOTATIONS from NCBI Entrez Gene (20130726):
            GeneID:9821 -> Molecular function: GO:0005515 [protein binding] evidence: IPI
            GeneID:9821 -> Molecular function: GO:0019901 [protein kinase binding] evidence: IEA
            GeneID:9821 -> Biological process: GO:0000045 [autophagic vacuole assembly] evidence: IEA
            GeneID:9821 -> Biological process: GO:0001889 [liver development] evidence: IEA
            GeneID:9821 -> Biological process: GO:0001934 [positive regulation of protein phosphorylation] evidence: IEA
            GeneID:9821 -> Biological process: GO:0006351 [transcription, DNA-dependent] evidence: IEA
            GeneID:9821 -> Biological process: GO:0006355 [regulation of transcription, DNA-dependent] evidence: IEA
            GeneID:9821 -> Biological process: GO:0007049 [cell cycle] evidence: IEA
            GeneID:9821 -> Biological process: GO:0007254 [JNK cascade] evidence: IEA
            GeneID:9821 -> Biological process: GO:0007507 [heart development] evidence: IEA
            GeneID:9821 -> Biological process: GO:0010506 [regulation of autophagy] evidence: ISS
            GeneID:9821 -> Biological process: GO:0043066 [negative regulation of apoptotic process] evidence: IEA
            GeneID:9821 -> Biological process: GO:0045793 [positive regulation of cell size] evidence: IEA
            GeneID:9821 -> Cellular component: GO:0005634 [nucleus] evidence: IEA
            GeneID:9821 -> Cellular component: GO:0005829 [cytosol] evidence: IEA
            GeneID:9821 -> Cellular component: GO:0034045 [pre-autophagosomal structure membrane] evidence: ISS
            GeneID:9821 -> Cellular component: GO:0070969 [ULK1-ATG13-FIP200 complex] evidence: IPI

by @meso_cacase at DBCLS
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