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2024-05-08 10:01:20, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_004331 3505 bp mRNA linear PRI 17-APR-2013
DEFINITION Homo sapiens BCL2/adenovirus E1B 19kDa interacting protein 3-like
(BNIP3L), mRNA.
ACCESSION NM_004331
VERSION NM_004331.2 GI:47078259
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3505)
AUTHORS Lu,Y., Wang,L., He,M., Huang,W., Li,H., Wang,Y., Kong,J., Qi,S.,
Ouyang,J. and Qiu,X.
TITLE Nix protein positively regulates NF-kappaB activation in gliomas
JOURNAL PLoS ONE 7 (9), E44559 (2012)
PUBMED 22984526
REMARK GeneRIF: Nix protein positively regulates NF-kappaB activation in
gliomas
REFERENCE 2 (bases 1 to 3505)
AUTHORS Nakamura,Y., Kitamura,N., Shinogi,D., Yoshida,M., Goda,O.,
Murai,R., Kamino,H. and Arakawa,H.
TITLE BNIP3 and NIX mediate Mieap-induced accumulation of lysosomal
proteins within mitochondria
JOURNAL PLoS ONE 7 (1), E30767 (2012)
PUBMED 22292033
REMARK GeneRIF: The physical interaction of Mieap, BNIP3 and NIX at the
mitochondrial outer membrane may play a critical role in the
translocation of lysosomal proteins from the cytoplasm to the
mitochondrial matrix.
REFERENCE 3 (bases 1 to 3505)
AUTHORS Kitamura,N., Nakamura,Y., Miyamoto,Y., Miyamoto,T., Kabu,K.,
Yoshida,M., Futamura,M., Ichinose,S. and Arakawa,H.
TITLE Mieap, a p53-inducible protein, controls mitochondrial quality by
repairing or eliminating unhealthy mitochondria
JOURNAL PLoS ONE 6 (1), E16060 (2011)
PUBMED 21264228
REMARK GeneRIF: mitochondrial ROS and NIX are essential factors for
Mieap-induced accumulation of lysosome-like organelles within
mitochondria
Publication Status: Online-Only
REFERENCE 4 (bases 1 to 3505)
AUTHORS Zhang,X., Yang,H., Lee,J.J., Kim,E., Lippman,S.M., Khuri,F.R.,
Spitz,M.R., Lotan,R., Hong,W.K. and Wu,X.
TITLE MicroRNA-related genetic variations as predictors for risk of
second primary tumor and/or recurrence in patients with early-stage
head and neck cancer
JOURNAL Carcinogenesis 31 (12), 2118-2123 (2010)
PUBMED 20819778
REMARK GeneRIF: Observational study of gene-disease association and
gene-gene interaction. (HuGE Navigator)
REFERENCE 5 (bases 1 to 3505)
AUTHORS Novak,I., Kirkin,V., McEwan,D.G., Zhang,J., Wild,P., Rozenknop,A.,
Rogov,V., Lohr,F., Popovic,D., Occhipinti,A., Reichert,A.S.,
Terzic,J., Dotsch,V., Ney,P.A. and Dikic,I.
TITLE Nix is a selective autophagy receptor for mitochondrial clearance
JOURNAL EMBO Rep. 11 (1), 45-51 (2010)
PUBMED 20010802
REMARK GeneRIF: Nix functions as an autophagy receptor, which mediates
mitochondrial clearance after mitochondrial damage and during
erythrocyte differentiation
REFERENCE 6 (bases 1 to 3505)
AUTHORS Imazu,T., Shimizu,S., Tagami,S., Matsushima,M., Nakamura,Y.,
Miki,T., Okuyama,A. and Tsujimoto,Y.
TITLE Bcl-2/E1B 19 kDa-interacting protein 3-like protein (Bnip3L)
interacts with bcl-2/Bcl-xL and induces apoptosis by altering
mitochondrial membrane permeability
JOURNAL Oncogene 18 (32), 4523-4529 (1999)
PUBMED 10467396
REFERENCE 7 (bases 1 to 3505)
AUTHORS Ohi,N., Tokunaga,A., Tsunoda,H., Nakano,K., Haraguchi,K., Oda,K.,
Motoyama,N. and Nakajima,T.
TITLE A novel adenovirus E1B19K-binding protein B5 inhibits apoptosis
induced by Nip3 by forming a heterodimer through the C-terminal
hydrophobic region
JOURNAL Cell Death Differ. 6 (4), 314-325 (1999)
PUBMED 10381623
REFERENCE 8 (bases 1 to 3505)
AUTHORS Yasuda,M., Han,J.W., Dionne,C.A., Boyd,J.M. and Chinnadurai,G.
TITLE BNIP3alpha: a human homolog of mitochondrial proapoptotic protein
BNIP3
JOURNAL Cancer Res. 59 (3), 533-537 (1999)
PUBMED 9973195
REFERENCE 9 (bases 1 to 3505)
AUTHORS Chen,G., Cizeau,J., Vande Velde,C., Park,J.H., Bozek,G., Bolton,J.,
Shi,L., Dubik,D. and Greenberg,A.
TITLE Nix and Nip3 form a subfamily of pro-apoptotic mitochondrial
proteins
JOURNAL J. Biol. Chem. 274 (1), 7-10 (1999)
PUBMED 9867803
REFERENCE 10 (bases 1 to 3505)
AUTHORS Matsushima,M., Fujiwara,T., Takahashi,E., Minaguchi,T., Eguchi,Y.,
Tsujimoto,Y., Suzumori,K. and Nakamura,Y.
TITLE Isolation, mapping, and functional analysis of a novel human cDNA
(BNIP3L) encoding a protein homologous to human NIP3
JOURNAL Genes Chromosomes Cancer 21 (3), 230-235 (1998)
PUBMED 9523198
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from CD558918.1, AB004788.1,
AF536326.1, AL132665.1, CD244492.1, BF337139.1, BQ719112.1 and
AA946755.1.
On May 7, 2004 this sequence version replaced gi:4757859.
Summary: This gene is a member of the BCL2/adenovirus E1B 19
kd-interacting protein (BNIP) family. It interacts with the E1B 19
kDa protein, which protects cells from virally-induced cell death.
The encoded protein also interacts with E1B 19 kDa-like sequences
of BCL2, another apoptotic protector. This protein counteracts the
apoptotic inducer BNIP3 and may play a role in tumor suppression.
[provided by RefSeq, Mar 2011].
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AL132665.1, AF536326.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
ERS025081, ERS025082 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-123 CD558918.1 110-232
124-1344 AB004788.1 45-1265
1345-1559 AF536326.1 1276-1490
1560-1589 AL132665.1 1529-1558
1590-2156 CD244492.1 1-567
2157-2303 BF337139.1 116-262
2304-2790 BQ719112.1 190-676
2791-3419 AL132665.1 2760-3388
3420-3505 AA946755.1 1-86 c
FEATURES Location/Qualifiers
source 1..3505
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="8"
/map="8p21"
gene 1..3505
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/note="BCL2/adenovirus E1B 19kDa interacting protein
3-like"
/db_xref="GeneID:665"
/db_xref="HGNC:1085"
/db_xref="HPRD:07288"
/db_xref="MIM:605368"
exon 1..224
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/inference="alignment:Splign:1.39.8"
variation 80
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:374495725"
variation 108
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:201168245"
variation 115
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="g"
/db_xref="dbSNP:1055476"
variation 124
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:1055479"
CDS 125..784
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/note="BCL2/adenovirus E1B 19-kd protein-interacting
protein 3a; adenovirus E1B19k-binding protein B5; NIP3L;
NIP3-like protein X; BCL2/adenovirus E1B 19 kDa
protein-interacting protein 3A"
/codon_start=1
/product="BCL2/adenovirus E1B 19 kDa protein-interacting
protein 3-like"
/protein_id="NP_004322.1"
/db_xref="GI:4757860"
/db_xref="CCDS:CCDS6050.1"
/db_xref="GeneID:665"
/db_xref="HGNC:1085"
/db_xref="HPRD:07288"
/db_xref="MIM:605368"
/translation="
MSSHLVEPPPPLHNNNNNCEENEQSLPPPAGLNSSWVELPMNSSNGNDNGNGKNGGLEHVPSSSSIHNGDMEKILLDAQHESGQSSSRGSSHCDSPSPQEDGQIMFDVEMHTSRDHSSQSEEEVVEGEKEVEALKKSADWVSDWSSRPENIPPKEFHFRHPKRSVSLSMRKSGAMKKGGIFSAEFLKVFIPSLFLSHVLALGLGIYIGKRLSTPSASTY
"
misc_feature 215..781
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/note="BNIP3; Region: BNIP3; pfam06553"
/db_xref="CDD:148263"
misc_feature 311..313
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/experiment="experimental evidence, no additional details
recorded"
/note="phosphorylation site"
misc_feature 314..316
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/experiment="experimental evidence, no additional details
recorded"
/note="phosphorylation site"
misc_feature 317..319
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/experiment="experimental evidence, no additional details
recorded"
/note="phosphorylation site"
misc_feature 473..475
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/experiment="experimental evidence, no additional details
recorded"
/note="phosphorylation site"
misc_feature 476..478
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/experiment="experimental evidence, no additional details
recorded"
/note="phosphorylation site"
misc_feature 482..484
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
(O60238.1); phosphorylation site"
misc_feature 482..484
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/experiment="experimental evidence, no additional details
recorded"
/note="phosphorylation site"
misc_feature 500..568
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (O60238.1);
Region: BH3"
misc_feature 686..748
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (O60238.1);
transmembrane region"
variation 133
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="c"
/db_xref="dbSNP:11558939"
variation 137
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:11558938"
variation 147
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:200275106"
variation 165
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:148873972"
variation 198
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="c"
/db_xref="dbSNP:11558934"
variation 204
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:199724930"
exon 225..408
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/inference="alignment:Splign:1.39.8"
variation 261
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="g"
/replace="t"
/db_xref="dbSNP:371069829"
variation 286
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:374028935"
variation 298
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:11558937"
variation 301
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:376700228"
variation 306
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="g"
/db_xref="dbSNP:11558936"
variation 329
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="g"
/replace="t"
/db_xref="dbSNP:1055806"
variation 370
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="t"
/db_xref="dbSNP:142587794"
variation 385
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="c"
/replace="t"
/db_xref="dbSNP:150951738"
variation 394
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="g"
/replace="t"
/db_xref="dbSNP:77491020"
variation 399
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:371278218"
exon 409..481
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/inference="alignment:Splign:1.39.8"
variation 415
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:373730069"
variation 462
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="g"
/db_xref="dbSNP:140739347"
variation 473
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:372238346"
exon 482..585
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/inference="alignment:Splign:1.39.8"
variation 508
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:372224652"
variation 517
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:201574024"
variation 547
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:150078014"
variation 568
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:200534833"
exon 586..735
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/inference="alignment:Splign:1.39.8"
variation 595
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:139026759"
variation 600
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:376715919"
variation 647
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:140691550"
variation 670
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:14994"
variation 671
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="g"
/replace="t"
/db_xref="dbSNP:373938692"
variation 673
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:200081637"
variation 717
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:369015422"
variation 734
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="g"
/replace="t"
/db_xref="dbSNP:11558935"
exon 736..3500
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/inference="alignment:Splign:1.39.8"
variation 753
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:370395797"
variation 930
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="t"
/db_xref="dbSNP:181172363"
STS 960..1274
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/standard_name="D8S1934"
/db_xref="UniSTS:10036"
variation 1041
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:143461495"
variation 1051
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:147987422"
variation 1066
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:141665153"
variation 1083
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:78665677"
variation 1087
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:144682826"
variation 1108
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:1801740"
STS 1110..1258
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/standard_name="D8S2073"
/db_xref="UniSTS:10874"
variation 1122
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="g"
/db_xref="dbSNP:138633301"
variation 1130
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:185134913"
variation 1187
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:188281347"
variation 1221
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="t"
/db_xref="dbSNP:57209892"
variation 1260
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="g"
/replace="t"
/db_xref="dbSNP:180756177"
variation 1296
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="c"
/db_xref="dbSNP:1055775"
variation 1301
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="c"
/db_xref="dbSNP:1055780"
variation 1306
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="c"
/db_xref="dbSNP:141789717"
variation 1319
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="g"
/db_xref="dbSNP:186437889"
polyA_signal 1342..1347
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
polyA_site 1364
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/experiment="experimental evidence, no additional details
recorded"
variation 1403
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:62490991"
variation 1405
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace=""
/replace="c"
/db_xref="dbSNP:369159380"
variation 1525..1528
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace=""
/replace="tctt"
/db_xref="dbSNP:147389989"
variation 1564
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="t"
/db_xref="dbSNP:190843678"
variation 1591
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="g"
/replace="t"
/db_xref="dbSNP:374818509"
variation 1705
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:146267360"
variation 1888
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:17310286"
variation 1896
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="g"
/db_xref="dbSNP:139214529"
variation 1945
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:17055200"
variation 2047
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:1042992"
variation 2114
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:73559596"
variation 2229
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="c"
/db_xref="dbSNP:183454962"
variation 2268
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:12165"
variation 2355
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:55920353"
variation 2393
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="c"
/db_xref="dbSNP:3182437"
variation 2485
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:372636389"
variation 2792
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:10503786"
variation 2877
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:149541705"
variation 2975
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:186863667"
variation 3055
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="g"
/db_xref="dbSNP:76206561"
STS 3245..3365
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/standard_name="RH103380"
/db_xref="UniSTS:97707"
variation 3287
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="a"
/replace="t"
/db_xref="dbSNP:369042805"
STS 3301..3367
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/standard_name="STS-Z40756"
/db_xref="UniSTS:78176"
STS 3368..3495
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/standard_name="D8S1556"
/db_xref="UniSTS:153669"
polyA_signal 3479..3484
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
polyA_site 3496
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/experiment="experimental evidence, no additional details
recorded"
variation 3498
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
/replace="c"
/replace="t"
/db_xref="dbSNP:148509730"
polyA_site 3500
/gene="BNIP3L"
/gene_synonym="BNIP3a; NIX"
ORIGIN
cgtcaggggcaggggagggacggcgcaggcgcagaaaagggggcggcggactcggcttgttgtgttgctgcctgagtgccggagacggtcctgctgctgccgcagtcctgccagctgtccgacaatgtcgtcccacctagtcgagccgccgccgcccctgcacaacaacaacaacaactgcgaggaaaatgagcagtctctgcccccgccggccggcctcaacagttcctgggtggagctacccatgaacagcagcaatggcaatgataatggcaatgggaaaaatggggggctggaacacgtaccatcctcatcctccatccacaatggagacatggagaagattcttttggatgcacaacatgaatcaggacagagtagttccagaggcagttctcactgtgacagcccttcgccacaagaagatgggcagatcatgtttgatgtggaaatgcacaccagcagggaccatagctctcagtcagaagaagaagttgtagaaggagagaaggaagtcgaggctttgaagaaaagtgcggactgggtatcagactggtccagtagacccgaaaacattccacccaaggagttccacttcagacaccctaaacgttctgtgtctttaagcatgaggaaaagtggagccatgaagaaagggggtattttctccgcagaatttctgaaggtgttcattccatctctcttcctttctcatgttttggctttggggctaggcatctatattggaaagcgactgagcacaccctctgccagcacctactgagggaaaggaaaagcccctggaaatgcgtgtgacctgtgaagtggtgtattgtcacagtagcttatttgaacttgagaccattgtaagcatgacccaacctaccaccctgtttttacatatccaattccagtaactctcaaattcaatattttattcaaactctgttgaggcattttactaaccttataccctttttggcctgaagacattttagaatttcctaacagagtttactgttgtttagaaatttgcaagggcttcttttccgcaaatgccaccagcagattataattttgtcagcaatgctattatctctaattagtgccaccagactagacctgtatcattcatggtataaattttactcttgcaacataactaccatctctctcttaaaacgagatcaggttagcaaatgatgtaaaagaagctttattgtctagttgttttttttcccccaagacaaaggcaagtttccctaagtttgagttgatagttattaaaaagaaaacaaaacaaaaaaaaaaggcaaggcacaacaaaaaaatatcctgggcaataaaaaaaatattttaaaccagctttggagccacttttttgtctaagcctcctaatagcgtcttttaatttataggaggcaaactgtataaatgataggtatgaaatagaataagaagtaaaatacatcagcagattttcatactagtatgttgtaatgctgtcttttctatggtgtagaatctttctttctgataaggaacgtctcaggcttagaaatatatgaaattgctttttgagatttttgcgtgtgtgtttgatattttttacgataattagctgcatgtgaatttttcatgaccttctttacattttttattttttatttctttatttttttttctctaagaagaggctttggaatgagttccaatttgtgatgttaatacaggcttcttgttttaggaagcatcacctatactctgaagcctttaaactctgaagagaattgtttcagagttattccaagcacttgtgcaacttggaaaaacagacttgggttgtgggaacagttgacagcgttctgaaaagatgccatttgtttccttctgatctctcactgaataatgtttactgtacagtcttcccaaggtgattcctgcgactgcaggcactggtcattttctcatgtagctgtcttttcagttatggtaaactcttaaagttcagaacactcaacagattccttcagtgatatacttgttcgttcatttctaaaatgtgaagctttaggaccaaattgttagaaagcatcaggatgaccagttatctcgagtagattttcttggatttcagaacatctagcatgactctgaaggataccacatgttttatatataaataattactgtttatgatatagacattgatattgactatttagagaaccgttgttaattttaaaactagcaatctataaagtgcaccaggtcaacttgaataaaaacactatgacagacaggtttgccagtttgcagaaactaactcttttctcacatcaacatttgtaaaattgatgtgttatagtggaaaataacatatagattaaacaaaatttttatcttttttcaagaatatagctggctatctttaagaaagatgatatatcctagttttgaaagtaattttcttttttctttctagcatttgatgtctaaataattttggacatctttttcctagaccatgtttctgtcttactcttaaacctggtaacacttgatttgccttctataacctatttatttcaagtgttcatatttgaatttctttgggaagaaagtaaatctgatggctcactgatttttgaaaagcctgaataaaattggaaagactggaaagttaggagaactgactagctaaactgctacagtatgcaatttctattacaattggtattacaggggggaaaagtaaaattacactttacctgaaagtgacttcttacagctagtgcattgtgctctttccaagttcagcagcagttctatcagtggtgccactgaaactgggtatatttatgatttctttcagcgttaaaaagaaacatagtgttgccctttttcttaaagcatcagtgaaattatggaaaattacttaaaacgtgaatacatcatcacagtagaatttattatgagagcatgtagtatgtatctgtagccctaacacatgggatgaacgttttactgctacacccagatttgtgttgaacgaaaacattgtggtttggaaaggagaattcaacaattaatagttgaaattgtgaggttaatgtttaaaaagctttacacctgtttacaatttggggacaaaaaggcaggcttcatttttcatatgtttgatgaaaactggctcaagatgtttgtaaatagaatcaagagcaaaactgcacaaacttgcacattggaaagtgcaacaagttcccgtgattgcagtaaaaatatttactattctaaaaaaatgagaattgaagacttagccagtcagataagttttttcatgaacccgttgtggaaattattggaattaactgagccaaagtgattatgcattcttcatctattttagttagcactttgtatcgttatatacagtttacaatacatgtataacttgtagctataaacattttgtgccattaaagctctcacaaaactttaaaaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:665 -> Molecular function: GO:0005515 [protein binding] evidence: IPI
GeneID:665 -> Molecular function: GO:0005521 [lamin binding] evidence: IDA
GeneID:665 -> Molecular function: GO:0005521 [lamin binding] evidence: IPI
GeneID:665 -> Molecular function: GO:0042802 [identical protein binding] evidence: IPI
GeneID:665 -> Molecular function: GO:0042803 [protein homodimerization activity] evidence: IDA
GeneID:665 -> Molecular function: GO:0046982 [protein heterodimerization activity] evidence: IDA
GeneID:665 -> Biological process: GO:0006915 [apoptotic process] evidence: IEA
GeneID:665 -> Biological process: GO:0006917 [induction of apoptosis] evidence: IDA
GeneID:665 -> Biological process: GO:0019048 [modulation by virus of host morphology or physiology] evidence: IEA
GeneID:665 -> Biological process: GO:0035694 [mitochondrial protein catabolic process] evidence: IMP
GeneID:665 -> Biological process: GO:0043066 [negative regulation of apoptotic process] evidence: IDA
GeneID:665 -> Biological process: GO:0051607 [defense response to virus] evidence: IDA
GeneID:665 -> Cellular component: GO:0005635 [nuclear envelope] evidence: IDA
GeneID:665 -> Cellular component: GO:0005739 [mitochondrion] evidence: IDA
GeneID:665 -> Cellular component: GO:0005741 [mitochondrial outer membrane] evidence: IMP
GeneID:665 -> Cellular component: GO:0005783 [endoplasmic reticulum] evidence: IDA
GeneID:665 -> Cellular component: GO:0016021 [integral to membrane] evidence: IEA
GeneID:665 -> Cellular component: GO:0031224 [intrinsic to membrane] evidence: TAS
by
@meso_cacase at
DBCLS
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