2024-04-23 17:56:45, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_004177 6498 bp mRNA linear PRI 16-JUN-2013 DEFINITION Homo sapiens syntaxin 3 (STX3), transcript variant 1, mRNA. ACCESSION NM_004177 VERSION NM_004177.4 GI:295842490 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 6498) AUTHORS Zhu,D., Koo,E., Kwan,E., Kang,Y., Park,S., Xie,H., Sugita,S. and Gaisano,H.Y. TITLE Syntaxin-3 regulates newcomer insulin granule exocytosis and compound fusion in pancreatic beta cells JOURNAL Diabetologia 56 (2), 359-369 (2013) PUBMED 23132338 REMARK GeneRIF: In insulin secretion, SYN-3 plays a role in the mediation of newcomer SG exocytosis and SG-SG fusion that contributes to biphasic GSIS. REFERENCE 2 (bases 1 to 6498) AUTHORS Frank,S.P., Thon,K.P., Bischoff,S.C. and Lorentz,A. TITLE SNAP-23 and syntaxin-3 are required for chemokine release by mature human mast cells JOURNAL Mol. Immunol. 49 (1-2), 353-358 (2011) PUBMED 21981832 REMARK GeneRIF: STX-3 and SNAP-23 are crucial for the release of all chemokines in mature human mast cells REFERENCE 3 (bases 1 to 6498) AUTHORS Day,P., Riggs,K.A., Hasan,N., Corbin,D., Humphrey,D. and Hu,C. TITLE Syntaxins 3 and 4 mediate vesicular trafficking of alpha5beta1 and alpha3beta1 integrins and cancer cell migration JOURNAL Int. J. Oncol. 39 (4), 863-871 (2011) PUBMED 21720706 REMARK GeneRIF: siRNA knockdown (KD) of syntaxins 3 and 4 in HeLa cells reduced cell surface expression of alpha5beta1 and alpha3beta1 integrins REFERENCE 4 (bases 1 to 6498) AUTHORS Cepeda,V. and Fraile-Ramos,A. TITLE A role for the SNARE protein syntaxin 3 in human cytomegalovirus morphogenesis JOURNAL Cell. Microbiol. 13 (6), 846-858 (2011) PUBMED 21371234 REMARK GeneRIF: These results demonstrate a function for STX3 in human cytomegalovirus morphogenesis, and unravel a new role for this SNARE protein in late endosomes/lysosomes compartments. REFERENCE 5 (bases 1 to 6498) AUTHORS Low,S.H., Vasanji,A., Nanduri,J., He,M., Sharma,N., Koo,M., Drazba,J. and Weimbs,T. TITLE Syntaxins 3 and 4 are concentrated in separate clusters on the plasma membrane before the establishment of cell polarity JOURNAL Mol. Biol. Cell 17 (2), 977-989 (2006) PUBMED 16339081 REFERENCE 6 (bases 1 to 6498) AUTHORS Martin-Martin,B., Nabokina,S.M., Lazo,P.A. and Mollinedo,F. TITLE Co-expression of several human syntaxin genes in neutrophils and differentiating HL-60 cells: variant isoforms and detection of syntaxin 1 JOURNAL J. Leukoc. Biol. 65 (3), 397-406 (1999) PUBMED 10080545 REFERENCE 7 (bases 1 to 6498) AUTHORS Steegmaier,M., Yang,B., Yoo,J.S., Huang,B., Shen,M., Yu,S., Luo,Y. and Scheller,R.H. TITLE Three novel proteins of the syntaxin/SNAP-25 family JOURNAL J. Biol. Chem. 273 (51), 34171-34179 (1998) PUBMED 9852078 REFERENCE 8 (bases 1 to 6498) AUTHORS Riento,K., Galli,T., Jansson,S., Ehnholm,C., Lehtonen,E. and Olkkonen,V.M. TITLE Interaction of Munc-18-2 with syntaxin 3 controls the association of apical SNAREs in epithelial cells JOURNAL J. Cell. Sci. 111 (PT 17), 2681-2688 (1998) PUBMED 9701566 REFERENCE 9 (bases 1 to 6498) AUTHORS Galli,T., Zahraoui,A., Vaidyanathan,V.V., Raposo,G., Tian,J.M., Karin,M., Niemann,H. and Louvard,D. TITLE A novel tetanus neurotoxin-insensitive vesicle-associated membrane protein in SNARE complexes of the apical plasma membrane of epithelial cells JOURNAL Mol. Biol. Cell 9 (6), 1437-1448 (1998) PUBMED 9614185 REFERENCE 10 (bases 1 to 6498) AUTHORS Delgrossi,M.H., Breuza,L., Mirre,C., Chavrier,P. and Le Bivic,A. TITLE Human syntaxin 3 is localized apically in human intestinal cells JOURNAL J. Cell. Sci. 110 (PT 18), 2207-2214 (1997) PUBMED 9378770 COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from AK125660.1, AP000640.5, BC007405.2 and AA858058.1. On May 7, 2010 this sequence version replaced gi:34147491. Summary: The gene is a member of the syntaxin family. The encoded protein is targeted to the apical membrane of epithelial cells where it forms clusters and is important in establishing and maintaining polarity necessary for protein trafficking involving vesicle fusion and exocytosis. Alternative splicing results in multiple transcript variants. [provided by RefSeq, May 2010]. Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1). Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK125660.1, BC007405.2 [ECO:0000332] RNAseq introns :: single sample supports all introns ERS025081, ERS025083 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-250 AK125660.1 1-250 251-251 AP000640.5 94617-94617 252-357 AK125660.1 252-357 358-3299 BC007405.2 1-2942 3300-6470 AP000640.5 142015-145185 6471-6498 AA858058.1 1-28 c FEATURES Location/Qualifiers source 1..6498 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="11" /map="11q12.1" gene 1..6498 /gene="STX3" /gene_synonym="STX3A" /note="syntaxin 3" /db_xref="GeneID:6809" /db_xref="HGNC:11438" /db_xref="HPRD:15985" /db_xref="MIM:600876" exon 1..577 /gene="STX3" /gene_synonym="STX3A" /inference="alignment:Splign:1.39.8" variation 32 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:186433609" variation 79 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="c" /db_xref="dbSNP:191329574" variation 84 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:181815631" variation 89 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:144281691" variation 251 /gene="STX3" /gene_synonym="STX3A" /replace="g" /replace="t" /db_xref="dbSNP:2957223" variation 279 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:147809952" variation 290 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:12791844" variation 373 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:375863784" misc_feature 395..397 /gene="STX3" /gene_synonym="STX3A" /note="upstream in-frame stop codon" variation 433 /gene="STX3" /gene_synonym="STX3A" /replace="g" /replace="t" /db_xref="dbSNP:11549443" variation 499 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="c" /db_xref="dbSNP:375908830" variation 510 /gene="STX3" /gene_synonym="STX3A" /replace="g" /replace="t" /db_xref="dbSNP:201796338" variation 516 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:200333761" variation 522 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:368272172" CDS 548..1417 /gene="STX3" /gene_synonym="STX3A" /note="isoform 1 is encoded by transcript variant 1; syntaxin 3A" /codon_start=1 /product="syntaxin-3 isoform 1" /protein_id="NP_004168.1" /db_xref="GI:4759184" /db_xref="CCDS:CCDS7975.1" /db_xref="GeneID:6809" /db_xref="HGNC:11438" /db_xref="HPRD:15985" /db_xref="MIM:600876" /translation="
MKDRLEQLKAKQLTQDDDTDAVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLYSIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADLRIRKSQHSVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSGIIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTVDHVEKARDETKKAVKYQSQARKKLIIIIVLVVVLLGILALIIGLSVGLN
" misc_feature 641..1090 /gene="STX3" /gene_synonym="STX3A" /note="Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may...; Region: SynN; cd00179" /db_xref="CDD:29141" misc_feature order(641..643,653..655,674..676,887..892,899..904, 911..913,920..925,941..943,950..952,1043..1045) /gene="STX3" /gene_synonym="STX3A" /note="nSec1 interaction sites; other site" /db_xref="CDD:29141" misc_feature order(734..736,767..769,776..781,800..802,812..814, 821..823,842..844,905..907,920..922,929..931,947..949, 968..973,980..985,989..994,1001..1003,1079..1081) /gene="STX3" /gene_synonym="STX3A" /note="interdomain interaction site; other site" /db_xref="CDD:29141" misc_feature order(1019..1051,1076..1090) /gene="STX3" /gene_synonym="STX3A" /note="linker region; other site" /db_xref="CDD:29141" misc_feature 1127..1306 /gene="STX3" /gene_synonym="STX3A" /note="Soluble NSF (N-ethylmaleimide-sensitive fusion protein)-Attachment protein (SNAP) REceptor domain; these alpha-helical motifs form twisted and parallel heterotetrameric helix bundles; the core complex contains one helix from a protein that is anchored in...; Region: t_SNARE; cd00193" /db_xref="CDD:29155" misc_feature order(1211..1213,1232..1234,1241..1243) /gene="STX3" /gene_synonym="STX3A" /note="flanking leucine-zipper layers; other site" /db_xref="CDD:29155" misc_feature 1220..1222 /gene="STX3" /gene_synonym="STX3A" /note="zero layer; other site" /db_xref="CDD:29155" misc_feature 1337..1399 /gene="STX3" /gene_synonym="STX3A" /inference="non-experimental evidence, no additional details recorded" /note="propagated from UniProtKB/Swiss-Prot (Q13277.3); transmembrane region" variation 558 /gene="STX3" /gene_synonym="STX3A" /replace="g" /replace="t" /db_xref="dbSNP:371043961" exon 578..661 /gene="STX3" /gene_synonym="STX3A" /inference="alignment:Splign:1.39.8" variation 591 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:2229915" variation 593 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:189998019" variation 601 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:370174495" variation 625 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:376688869" variation 634 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:35804634" exon 662..761 /gene="STX3" /gene_synonym="STX3A" /inference="alignment:Splign:1.39.8" variation 687 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:371596190" variation 706 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:199724694" variation 708 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:374509506" variation 722 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:201820174" variation 725 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:140285651" variation 734 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:147225705" variation 741 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="g" /db_xref="dbSNP:145044710" variation 757 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="g" /db_xref="dbSNP:140824363" exon 762..836 /gene="STX3" /gene_synonym="STX3A" /inference="alignment:Splign:1.39.8" variation 766 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:143769761" variation 789 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:372929986" variation 790 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:144578073" variation 793 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:369530989" variation 796 /gene="STX3" /gene_synonym="STX3A" /replace="g" /replace="t" /db_xref="dbSNP:12282741" variation 817 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="c" /replace="t" /db_xref="dbSNP:151157690" variation 818 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:200311584" variation 826 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="c" /db_xref="dbSNP:2228625" exon 837..904 /gene="STX3" /gene_synonym="STX3A" /inference="alignment:Splign:1.39.8" variation 838 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:148104403" variation 850 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:79259751" variation 865 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:142839021" variation 887 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:374026450" exon 905..1013 /gene="STX3" /gene_synonym="STX3A" /inference="alignment:Splign:1.39.8" variation 920 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:199896680" variation 937 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:202134972" variation 971 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:372990138" variation 978 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:183505688" variation 1007 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:201661485" exon 1014..1087 /gene="STX3" /gene_synonym="STX3A" /inference="alignment:Splign:1.39.8" variation 1030 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:199519154" variation 1045 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:370179297" variation 1068 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:373637735" variation 1087 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:576991" exon 1088..1222 /gene="STX3" /gene_synonym="STX3A" /inference="alignment:Splign:1.39.8" variation 1137 /gene="STX3" /gene_synonym="STX3A" /replace="g" /replace="t" /db_xref="dbSNP:368588524" variation 1139 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:372664488" variation 1192 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:34900239" variation 1201 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:371255872" variation 1202 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:376160845" variation 1205 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:202002338" exon 1223..1333 /gene="STX3" /gene_synonym="STX3A" /inference="alignment:Splign:1.39.8" variation 1273 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:377204078" variation 1296 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:370426130" variation 1328 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:142968661" exon 1334..1447 /gene="STX3" /gene_synonym="STX3A" /inference="alignment:Splign:1.39.8" variation 1373 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:34563654" variation 1377 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:371407994" variation 1400 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:34753750" variation 1403 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:35790732" variation 1408 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:140709330" variation 1432 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:376104800" variation 1433 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="g" /db_xref="dbSNP:184621295" exon 1448..6475 /gene="STX3" /gene_synonym="STX3A" /inference="alignment:Splign:1.39.8" STS 1505..1714 /gene="STX3" /gene_synonym="STX3A" /standard_name="SGC35544" /db_xref="UniSTS:37883" variation 1570 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:113328109" variation 1641 /gene="STX3" /gene_synonym="STX3A" /replace="g" /replace="t" /db_xref="dbSNP:112028314" variation 1663 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:185985355" variation 1863 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="c" /db_xref="dbSNP:191281755" variation 1922 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:183089906" variation 1931 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:188373428" variation 2063 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:17154203" variation 2109 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="g" /db_xref="dbSNP:149572486" variation 2306 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:144367547" variation 2322 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="t" /db_xref="dbSNP:498077" variation 2330 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:76410717" variation 2339 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:15535" variation 2365 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:115208854" variation 2394 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="c" /db_xref="dbSNP:76903164" variation 2416 /gene="STX3" /gene_synonym="STX3A" /replace="" /replace="a" /db_xref="dbSNP:75334454" variation 2416 /gene="STX3" /gene_synonym="STX3A" /replace="g" /replace="t" /db_xref="dbSNP:2447319" variation 2476 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:112012200" variation 2525 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="c" /db_xref="dbSNP:520851" variation 2530..2531 /gene="STX3" /gene_synonym="STX3A" /replace="" /replace="c" /db_xref="dbSNP:35824646" variation 2580 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="c" /db_xref="dbSNP:510980" variation 2638 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:61463035" variation 2760 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:141022527" variation 2779 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:143178299" variation 2822 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:190434715" variation 2882 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="c" /db_xref="dbSNP:111417259" variation 2926 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:187750103" variation 2967 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:192514576" variation 2968 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:147514115" STS 2997..3201 /gene="STX3" /gene_synonym="STX3A" /standard_name="RH67805" /db_xref="UniSTS:59457" variation 3004 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:17511686" variation 3118 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="g" /db_xref="dbSNP:184288005" variation 3174 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="g" /db_xref="dbSNP:1801585" variation 3257 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="t" /db_xref="dbSNP:12790380" variation 3262 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:140118609" polyA_signal 3270..3275 /gene="STX3" /gene_synonym="STX3A" variation 3286 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:61903590" variation 3287 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:187655236" polyA_site 3299 /gene="STX3" /gene_synonym="STX3A" variation 3301 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:114965596" variation 3318 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="g" /db_xref="dbSNP:79797606" variation 3322 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="g" /db_xref="dbSNP:142102987" variation 3332 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:192861969" variation 3343 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="c" /db_xref="dbSNP:12276220" variation 3355 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:75768611" variation 3388 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:482356" variation 3472 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:151181740" variation 3478 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:184671122" variation 3499 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:372714139" variation 3593 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="c" /db_xref="dbSNP:117506016" variation 3603..3604 /gene="STX3" /gene_synonym="STX3A" /replace="" /replace="atcctctggga" /db_xref="dbSNP:112607308" variation 3608..3609 /gene="STX3" /gene_synonym="STX3A" /replace="" /replace="ctgggaatcct" /db_xref="dbSNP:370096293" variation 3740..3741 /gene="STX3" /gene_synonym="STX3A" /replace="" /replace="a" /db_xref="dbSNP:200407732" variation 3764 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:139028304" variation 3765 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:77086274" variation 3828 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="g" /db_xref="dbSNP:188824241" variation 3848 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:71488421" variation 3860 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="g" /db_xref="dbSNP:371249929" variation 3919 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="t" /db_xref="dbSNP:76227275" variation 3931 /gene="STX3" /gene_synonym="STX3A" /replace="g" /replace="t" /db_xref="dbSNP:115456904" variation 3947 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:75304130" variation 4008..4009 /gene="STX3" /gene_synonym="STX3A" /replace="" /replace="a" /db_xref="dbSNP:35910556" variation 4032 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:181581600" variation 4087 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:75068764" variation 4174 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:493567" variation 4301 /gene="STX3" /gene_synonym="STX3A" /replace="g" /replace="t" /db_xref="dbSNP:184536225" variation 4343 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:149881123" variation 4344 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:112302565" variation 4350 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:76066477" variation 4436 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:189299452" variation 4545 /gene="STX3" /gene_synonym="STX3A" /replace="g" /replace="t" /db_xref="dbSNP:182177716" variation 4655 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:146502802" variation 4696 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="g" /db_xref="dbSNP:75693737" variation 4721..4722 /gene="STX3" /gene_synonym="STX3A" /replace="" /replace="actt" /db_xref="dbSNP:111282767" variation 4722..4723 /gene="STX3" /gene_synonym="STX3A" /replace="" /replace="actt" /db_xref="dbSNP:371281921" variation 4723..4724 /gene="STX3" /gene_synonym="STX3A" /replace="" /replace="ttac" /db_xref="dbSNP:372991382" variation 4728 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="t" /db_xref="dbSNP:185966931" STS 4756..4934 /gene="STX3" /gene_synonym="STX3A" /standard_name="A005M15" /db_xref="UniSTS:12376" STS 4756..4934 /gene="STX3" /gene_synonym="STX3A" /standard_name="G32238" /db_xref="UniSTS:116841" variation 4980 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="g" /db_xref="dbSNP:141138778" variation 5023 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="t" /db_xref="dbSNP:190692069" variation 5223 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="t" /db_xref="dbSNP:144743079" variation 5383 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="g" /db_xref="dbSNP:146721853" variation 5403..5404 /gene="STX3" /gene_synonym="STX3A" /replace="" /replace="a" /db_xref="dbSNP:201488460" variation 5428 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:181027738" variation 5493..5494 /gene="STX3" /gene_synonym="STX3A" /replace="" /replace="t" /db_xref="dbSNP:111375650" variation 5547 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:111623929" STS 5650..5739 /gene="STX3" /gene_synonym="STX3A" /standard_name="PMC156606P1" /db_xref="UniSTS:271408" variation 5724 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="c" /db_xref="dbSNP:547093" variation 5769..5770 /gene="STX3" /gene_synonym="STX3A" /replace="" /replace="a" /db_xref="dbSNP:371101239" variation 5781..5782 /gene="STX3" /gene_synonym="STX3A" /replace="" /replace="aa" /db_xref="dbSNP:72448107" variation 5786 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="c" /db_xref="dbSNP:61317138" variation 5786 /gene="STX3" /gene_synonym="STX3A" /replace="" /replace="c" /db_xref="dbSNP:375835803" variation 5789 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="c" /db_xref="dbSNP:143709973" variation 5790 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="c" /db_xref="dbSNP:368424383" variation 5791..5792 /gene="STX3" /gene_synonym="STX3A" /replace="" /replace="aacaaac" /db_xref="dbSNP:72379101" variation 5791 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /replace="t" /db_xref="dbSNP:518122" variation 5792 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="c" /db_xref="dbSNP:57471515" variation 5804..5810 /gene="STX3" /gene_synonym="STX3A" /replace="" /replace="cttaata" /db_xref="dbSNP:112792099" variation 5806..5812 /gene="STX3" /gene_synonym="STX3A" /replace="" /replace="taatact" /db_xref="dbSNP:376226579" variation 5810..5816 /gene="STX3" /gene_synonym="STX3A" /replace="" /replace="acttaat" /db_xref="dbSNP:71859644" variation 5810 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="t" /db_xref="dbSNP:113035425" variation 5867 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:367957722" variation 5871 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:185433097" variation 5954 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="g" /db_xref="dbSNP:190292141" variation 6020 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="c" /db_xref="dbSNP:11825921" variation 6030..6031 /gene="STX3" /gene_synonym="STX3A" /replace="" /replace="a" /db_xref="dbSNP:111676707" variation 6034 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="c" /db_xref="dbSNP:182724619" variation 6050 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="c" /db_xref="dbSNP:79108604" variation 6077 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:373300329" variation 6174 /gene="STX3" /gene_synonym="STX3A" /replace="c" /replace="t" /db_xref="dbSNP:150197655" variation 6255 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:187416071" STS 6328..6460 /gene="STX3" /gene_synonym="STX3A" /standard_name="D11S4654" /db_xref="UniSTS:5635" variation 6338 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="g" /db_xref="dbSNP:114025228" variation 6411 /gene="STX3" /gene_synonym="STX3A" /replace="a" /replace="c" /db_xref="dbSNP:75567003" polyA_signal 6451..6456 /gene="STX3" /gene_synonym="STX3A" polyA_site 6475 /gene="STX3" /gene_synonym="STX3A" ORIGIN
agcttgtccccgcctagcaaggagtcggctaagaactggatcctagcgaggagcccggcacagacagcgaatgaccgcagccagacagtcgctcttgctcttcctcggccctgcggcaggatccgccggtgcaggggcctctccccggactccacgcgtgtctggagggctctcgggttagggaagggggctttggagacgccccgggcggccgggcggtggcgggacgcgggccctttaagaaggagcgaggggcgcggccaggtaggggcgggtccagggcggatcagcgctgcgccggcgccggcccgggagccggatttggagcgcgaggcgccggtgggggcggagggggctgcgcggcggaggctcccgtggcctcggacgctcctcctagctagcggccgccgcccgccgccgcctgcgcctccagctccttcgccccggcgggcccggccgccgcttccggcagctcacctgggaagcgctcacctgggacgcgctcacctgggacgcgctacctgcctccgggcgcctgggcttcaggatgaaggaccgtctggagcagctgaaggccaagcagctgacacaggatgatgatactgatgcggttgagattgctatcgacaacacggcttttatggacgagttcttttctgagattgaggaaactcggcttaacattgacaagatctcagaacatgtagaggaggctaagaaactctacagtatcattctctctgcaccgattccagagccaaaaaccaaggatgacctagagcagctcacgactgagattaagaaaagggccaacaacgtccggaacaaactgaagagcatggagaagcatattgaagaagatgaggtcaggtcatcggcagaccttcggattcggaaatcccagcactctgtcctttctcggaagtttgtggaggtgatgaccaaatacaatgaagctcaagtggacttccgagaacgcagcaaagggcgaatccagcggcagctcgaaattactggcaaaaagacaaccgatgaggagctggaggagatgttggagagtggcaacccggccatcttcacttctgggatcattgactcacagatttccaagcaagccctcagtgagattgagggacgacacaaggacattgtgaggctggagagcagcatcaaggagcttcacgacatgtttatggacatcgccatgctggtggagaatcagggtgagatgttagataacatagagttgaatgtcatgcacacagtggaccacgtggagaaggcacgagatgaaacgaaaaaagctgtgaaataccagagtcaggcccggaagaaattgataattatcattgtgctagtagttgtgttgctgggcattttagcattgattattggactttccgttgggctgaattaagagtggcctaagaggctgctgcactgaaataaactgatttcactccagactggtgtggccacccttgtcttcagatgagaatggagtctgaatggccttcctgagagcgagtgcgacccgttcctttgtttccttgcaaccacccttggacctgactcagctaacaatctagccctgggggaatgtgatctacctgatgcgaccctgagttctccccagagcctcctcctgccccaccagctctcaagtaccttttctcctggactgtgtggacccacccagctttcttcctccctgttgtgtgtcagattatgccttgcacttgggaaagctcttgtgagactctcccaaggtgctgtatttttctacctcatggagtattctcccagaaactgcaatgtatttttttaggggagtatctttaacaaagcagaatgattcttctaagtttggcaacaagaaggcttggatctgagtcttctacctggcaggatgccaatcctgtttgttgtccgtatgtcctgaaaacatgagggactggcagatgtcattttggtctaaagagctgacttgtttgaaattcagccttaaattaagctcttagttgttcagcttggggggcaactttgatttttctctgtgttgtagtctctcatatttactcaaggagggaccaggatgatacagtcatctgaggttatgctttgcaaaaggctgacggtatggaatatgtttccatgtctgagtcttagaaactggctgctcattgttagaaagtgatgctttgtgagactattgtcttggggccaaaaataatcagggattttaaattgggcaagggacaaggtgctagaatcctaagctctggaaatatttcatgacactggtgtattcactcatgtgttccagatgtattctaattgtgtatgaaatgtatgtacacataagtgtgtgtgtctcaggaagtaggaaataaaaatggaagctattatgacctcaaaaaaaaaaagccaactttgagctaggataaaaattgggtaaaggacatttgcttacctgcaaatgaatcactgtggaaatgtgatcttcccatatcatcaagaaacttgttttctggatgaatactgggagaataaaatgagaactctggagtgagctaaattgatcccaattaagtttttctgcttagcagacagaaggtataattttttgacaccctttcccacctggtgcctatgctaggcttgtcctgagaacatccctcagtaacttgatattcacatgacctacaggatgtcccatctgcagggctgagtcagttggggaacaccagaggctacacagtagctcttcctgctactcggttaatgagcttggcaggttctttgtctcactgaattcttatcatggaaacagcagcagcagccgctaggaaatcttcaagtgtagtgtctgtgctaacccagtggtaaatcccttagatcccctgctggtctctggcagtctccttgattttgggtaccatgtatattttccgctttgactttaacgctttctaggatagggtaagcacccttaattcaggcactgtccattagcttcctttgcaaaggctacttatggccggtcacaatccagcactcagacagagccaaggcaatatcctcttgcccatggctatgatgtcagacagtggatgggctccagcaacaagagacaaaataactaaaggcctttgctctcctctgacattgaggcctggggcttacagtttggaatacaacatgtgaaggtttttgttgttgtttgtattttttagatgtaaacttgattattttattgctaatttaaaaataaaaatgactttgtattgattgtgaaacggttctggctctgtctcgatgcagaaacacaatgatctggtgccaccatgtggtgatttttattcaggttttagaatgcagttcacacctttttaagccatgtgctggatcagatggttcaaaagtgcaatttttgaacatggtttaactcccacagaatgcagtgtaactatgtttgtgtttcagatttgaggtgttccccccaaaagaatttggttcagtccttgggagtatctggctttaggaggaaatgggggagatctgtcacgatgttatctagaaggtggaatgaccataccaaacatccttttaatctaacttgaatgtctcaccaaaaataacatttctgttggcattctgggtcctagaagccagatccatctcctttttccttctgttgctctcttccttcacaccctcttccatgtccacatgcacttatctccctgcagaatactttttgcgatgatgtttctcatgtattctttctttccttgtctggatgagcagaagaagatcatgatcatgatctgctgtattatccttgcgatcatcttagcttccaccattgggagcatatttgcctgaaaaaggtgagccatctgtggggagggtcagaccttctttcactgacttgaaacctttgtgtcttgggggcactctaggtgccttaatctgggtgggattaggtgctaataatggttagagaaaactaaagaaagggatgtttcagagacagaaaagtgagtgaagaatgaactgttagtaggtagtctgtgggaggaggggggagacagaaggtggcaatctgtcctataacctggtgtggcagaatgctttgtacaggtgaaggatagtgattcctgctaaacagtttgagccttggtatctggaagtgacaaaaagaacaagaattagttcttgcattaggtgcatcttgaactttttggaagagggccggccacacagtaaattcaaattaaatttcttccctttcaaggttaatgaaagttaacacagccttgtatgtagtcctttaccccgggtaagagggatttggtgatcccagccacgaacaccatgctatataatctatgatttttttcctccatttttctgttatctcccacagccctcacagattgatcgactggcatttctaatcctccttccacttctgtggtaccatcacttctccacgcagactcctcatcagcttctcctctttccattatgaaacttcttaagaaacagggcaccaatcaactacttattaagaattatgcaaagaataaacgtatacagaattgggcggaggacagggacagggagtacagatacatagctgattaggcagatggtttaaaggaggactgcagggtagagaagcaagcagagtgggcgcctctttaggaagtgacacagcctgcatgtgcagtatggctgtgaaggggcagatatcatagcacacctaactcaacaggatcttacttgaactgctgtgagttggtcaagtcagggcacttctgctcttcaggctcctctaggtcacacctttgaccaccctacatctgtttcctctttcaggctccagtagtagtcttaaaagtgaagtttatctaaggataagcacatgcctatcttgctcactgctgtgtccccactttttagcacagcgcctgctgcttacaggtactcaaatatctgctgacttaattacttataattaagctcttatttcagtcatggacaaatccttgggtttgactcctaaactctttaaggtaccaatgagaacgtggtttgttactgtcagaggctgtgtaaagccgcttgggaatgggctgatctgcttatgcaaaaatgctaccaacctttcaaaccccattaccacaacatgaaaatttaaagtgctttttctatgggtggtgatggtggagttctagcaacagcctcttaatctgtggagaagatggctggctccaggactgtggttcaataacgaaatacaggcccacaaaataaaataggtttatagcatgactgaactcacacatcagtagaacactctgtgaaccataacaaagaacagataaaggtgtcaagtgagaaaggtgaaatgaggttatcactcacttcacctctcacctgatttgtgttgctagctgaaactgctggccagtaacgtatgtataagaaactgttataggccgggcacggtggctcatgcctgtaatcacagcactttgggaggccaaggcaggtggatcaccagactgaccaacatagtgaaaccccctctctacaaaaaatacaaaaattagccaggcatggtggcttgcacctgtattcccagctacttgggaggctgaggcaggagaattgcttgaatgcaagaggcggaagttgcagtgagccgagatcgcgccactgcactccagcctgggcaacaagagctaaattccatctaaaaaaaaaaaaaaaacaaaaaaaaaaaactgttcttaatacttaatactgtccccaattccattcaaggttcagttgtgttcagctttaaaaccagctatgtgaatgtgagttctagtgcagattatttagtgattatgtaactaaaattgatgaaaaaatcacactatacaactgtgaggagcacacaactgctaagtttgtacttttgaaagtaaattattctttgtttgataccttattttttaagaaagtgggattaaaaatattttggtcagtgctgttttctacccaccttcaaaagccaatggtttgatatttctattaatttgtgcttcctttagttttaataggggatagaagactgcagctggttgggtctggaaaacattaatctgggcaaacggagctggagctatgaggatctgagtcctagggggccctcattcactagcagtaagaatttaagtggtgcatggcacatagcactgtactagattctgcaggggcacaaacatagagccaaacactctccctcttggagaatttcagacccagaaaaggccacgcagttctaacttttgtcatcggttccttttgctaaaaggcaaagggtatgttccttgcctattgtccaacataccccttccaagattgtgagaagatgggtagctgggcatcaataaatattgaatcaattgacctaaaaaaaaaaaaaaaaaaaaaaaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726): GeneID:6809 -> Molecular function: GO:0005484 [SNAP receptor activity] evidence: IEA GeneID:6809 -> Molecular function: GO:0005515 [protein binding] evidence: IPI GeneID:6809 -> Molecular function: GO:0050544 [arachidonic acid binding] evidence: ISS GeneID:6809 -> Biological process: GO:0006836 [neurotransmitter transport] evidence: IEA GeneID:6809 -> Biological process: GO:0006886 [intracellular protein transport] evidence: IEA GeneID:6809 -> Biological process: GO:0006887 [exocytosis] evidence: IEA GeneID:6809 -> Biological process: GO:0006944 [cellular membrane fusion] evidence: IEA GeneID:6809 -> Biological process: GO:0031175 [neuron projection development] evidence: ISS GeneID:6809 -> Cellular component: GO:0005773 [vacuole] evidence: TAS GeneID:6809 -> Cellular component: GO:0005911 [cell-cell junction] evidence: IDA GeneID:6809 -> Cellular component: GO:0016021 [integral to membrane] evidence: IEA GeneID:6809 -> Cellular component: GO:0016324 [apical plasma membrane] evidence: IDA GeneID:6809 -> Cellular component: GO:0030426 [growth cone] evidence: ISS GeneID:6809 -> Cellular component: GO:0031201 [SNARE complex] evidence: ISS GeneID:6809 -> Cellular component: GO:0042581 [specific granule] evidence: IDA GeneID:6809 -> Cellular component: GO:0042582 [azurophil granule] evidence: IDA GeneID:6809 -> Cellular component: GO:0043005 [neuron projection] evidence: ISS
by
@meso_cacase at
DBCLS
This page is licensed under a Creative Commons Attribution 2.1 Japan License.