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2024-03-29 15:39:15, GGRNA : RefSeq release 60 (20130726)

LOCUS       NM_001393               3307 bp    mRNA    linear   PRI 17-APR-2013
DEFINITION  Homo sapiens extracellular matrix protein 2, female organ and
            adipocyte specific (ECM2), transcript variant 1, mRNA.
ACCESSION   NM_001393
VERSION     NM_001393.3  GI:308818202
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3307)
  AUTHORS   Humphray,S.J., Oliver,K., Hunt,A.R., Plumb,R.W., Loveland,J.E.,
            Howe,K.L., Andrews,T.D., Searle,S., Hunt,S.E., Scott,C.E.,
            Jones,M.C., Ainscough,R., Almeida,J.P., Ambrose,K.D., Ashwell,R.I.,
            Babbage,A.K., Babbage,S., Bagguley,C.L., Bailey,J., Banerjee,R.,
            Barker,D.J., Barlow,K.F., Bates,K., Beasley,H., Beasley,O.,
            Bird,C.P., Bray-Allen,S., Brown,A.J., Brown,J.Y., Burford,D.,
            Burrill,W., Burton,J., Carder,C., Carter,N.P., Chapman,J.C.,
            Chen,Y., Clarke,G., Clark,S.Y., Clee,C.M., Clegg,S., Collier,R.E.,
            Corby,N., Crosier,M., Cummings,A.T., Davies,J., Dhami,P., Dunn,M.,
            Dutta,I., Dyer,L.W., Earthrowl,M.E., Faulkner,L., Fleming,C.J.,
            Frankish,A., Frankland,J.A., French,L., Fricker,D.G., Garner,P.,
            Garnett,J., Ghori,J., Gilbert,J.G., Glison,C., Grafham,D.V.,
            Gribble,S., Griffiths,C., Griffiths-Jones,S., Grocock,R., Guy,J.,
            Hall,R.E., Hammond,S., Harley,J.L., Harrison,E.S., Hart,E.A.,
            Heath,P.D., Henderson,C.D., Hopkins,B.L., Howard,P.J., Howden,P.J.,
            Huckle,E., Johnson,C., Johnson,D., Joy,A.A., Kay,M., Keenan,S.,
            Kershaw,J.K., Kimberley,A.M., King,A., Knights,A., Laird,G.K.,
            Langford,C., Lawlor,S., Leongamornlert,D.A., Leversha,M., Lloyd,C.,
            Lloyd,D.M., Lovell,J., Martin,S., Mashreghi-Mohammadi,M.,
            Matthews,L., McLaren,S., McLay,K.E., McMurray,A., Milne,S.,
            Nickerson,T., Nisbett,J., Nordsiek,G., Pearce,A.V., Peck,A.I.,
            Porter,K.M., Pandian,R., Pelan,S., Phillimore,B., Povey,S.,
            Ramsey,Y., Rand,V., Scharfe,M., Sehra,H.K., Shownkeen,R.,
            Sims,S.K., Skuce,C.D., Smith,M., Steward,C.A., Swarbreck,D.,
            Sycamore,N., Tester,J., Thorpe,A., Tracey,A., Tromans,A.,
            Thomas,D.W., Wall,M., Wallis,J.M., West,A.P., Whitehead,S.L.,
            Willey,D.L., Williams,S.A., Wilming,L., Wray,P.W., Young,L.,
            Ashurst,J.L., Coulson,A., Blocker,H., Durbin,R., Sulston,J.E.,
            Hubbard,T., Jackson,M.J., Bentley,D.R., Beck,S., Rogers,J. and
            Dunham,I.
  TITLE     DNA sequence and analysis of human chromosome 9
  JOURNAL   Nature 429 (6990), 369-374 (2004)
   PUBMED   15164053
REFERENCE   2  (bases 1 to 3307)
  AUTHORS   Nishiu,J., Tanaka,T. and Nakamura,Y.
  TITLE     Identification of a novel gene (ECM2) encoding a putative
            extracellular matrix protein expressed predominantly in adipose and
            female-specific tissues and its chromosomal localization to 9q22.3
  JOURNAL   Genomics 52 (3), 378-381 (1998)
   PUBMED   9790758
REFERENCE   3  (bases 1 to 3307)
  AUTHORS   Oritani,K., Kanakura,Y., Aoyama,K., Yokota,T., Copeland,N.G.,
            Gilbert,D.J., Jenkins,N.A., Tomiyama,Y., Matsuzawa,Y. and
            Kincade,P.W.
  TITLE     Matrix glycoprotein SC1/ECM2 augments B lymphopoiesis
  JOURNAL   Blood 90 (9), 3404-3413 (1997)
   PUBMED   9345023
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence was derived from DC300418.1, AB011792.1 and
            BM972177.1.
            On Oct 16, 2010 this sequence version replaced gi:53759132.
            
            Summary: ECM2 encodes extracellular matrix protein 2, so named
            because it shares extensive similarity with known extracelluar
            matrix proteins. Three transcript variants encoding different
            isoforms have been found for this gene. [provided by RefSeq, Oct
            2010].
            
            Transcript Variant: This variant (1) represents the longest
            transcript and encodes the longest isoform (1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB011792.1, AK312820.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           ERS025084, ERS025088 [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-122               DC300418.1         1-122
            123-3285            AB011792.1         9-3171
            3286-3307           BM972177.1         1-22                c
FEATURES             Location/Qualifiers
     source          1..3307
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="9"
                     /map="9q22.3"
     gene            1..3307
                     /gene="ECM2"
                     /note="extracellular matrix protein 2, female organ and
                     adipocyte specific"
                     /db_xref="GeneID:1842"
                     /db_xref="HGNC:3154"
                     /db_xref="HPRD:09148"
                     /db_xref="MIM:603479"
     exon            1..160
                     /gene="ECM2"
                     /inference="alignment:Splign:1.39.8"
     misc_feature    26..28
                     /gene="ECM2"
                     /note="upstream in-frame stop codon"
     exon            161..479
                     /gene="ECM2"
                     /inference="alignment:Splign:1.39.8"
     CDS             188..2287
                     /gene="ECM2"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 1; matrix glycoprotein SC1/ECM2"
                     /codon_start=1
                     /product="extracellular matrix protein 2 isoform 1
                     precursor"
                     /protein_id="NP_001384.1"
                     /db_xref="GI:4557543"
                     /db_xref="CCDS:CCDS6698.1"
                     /db_xref="GeneID:1842"
                     /db_xref="HGNC:3154"
                     /db_xref="HPRD:09148"
                     /db_xref="MIM:603479"
                     /translation="
MKIAVLFCFFLLIIFQTDFGKNEEIPRKQRRKIYHRRLRKSSTSHKHRSNRQLGIQQTTVFTPVARLPIVNFDYSMEEKFESFSSFPGVESSYNVLPGKKGHCLVKGITMYNKAVWSPEPCTTCLCSDGRVLCDETMCHPQRCPQTVIPEGECCPVCSATVSYSLLSGIALNDRNEFSGDSSEQREPTNLLHKQLPPPQVGMDRIVRKEALQSEEDEEVKEEDTEQKRETPESRNQGQLYSEGDSRGGDRKQRPGEERRLAHQQQRQGREEEEDEEEEGEEGEEDEEDEEDPVRGDMFRMPSRSPLPAPPRGTLRLPSGCSLSYRTISCINAMLTQIPPLTAPQITSLELTGNSIASIPDEAFNGLPNLERLDLSKNNITSSGIGPKAFKLLKKLMRLNMDGNNLIQIPSQLPSTLEELKVNENNLQAIDEESLSDLNQLVTLELEGNNLSEANVNPLAFKPLKSLAYLRLGKNKFRIIPQGLPGSIEELYLENNQIEEITEICFNHTRKINVIVLRYNKIEENRIAPLAWINQENLESIDLSYNKLYHVPSYLPKSLLHLVLLGNQIERIPGYVFGHMEPGLEYLYLSFNKLADDGMDRVSFYGAYHSLRELFLDHNDLKSIPPGIQEMKALHFLRLNNNKIRNILPEEICNAEEDDDSNLEHLHLENNYIKIREIPSYTFSCIRSYSSIVLKPQNIK
"
     sig_peptide     188..247
                     /gene="ECM2"
                     /inference="COORDINATES: ab initio prediction:SignalP:4.0"
     mat_peptide     248..2284
                     /gene="ECM2"
                     /product="extracellular matrix protein 2 isoform 1"
     misc_feature    494..658
                     /gene="ECM2"
                     /note="von Willebrand factor type C domain; Region: VWC;
                     pfam00093"
                     /db_xref="CDD:109161"
     misc_feature    1067..1075
                     /gene="ECM2"
                     /inference="non-experimental evidence, no additional
                     details recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (O94769.1);
                     Region: Cell attachment site (Potential)"
     misc_feature    <1211..1615
                     /gene="ECM2"
                     /note="Leucine-rich repeats (LRRs), ribonuclease inhibitor
                     (RI)-like subfamily. LRRs are 20-29 residue sequence
                     motifs present in many proteins that participate in
                     protein-protein interactions and have different functions
                     and cellular locations. LRRs correspond...; Region:
                     LRR_RI; cl15309"
                     /db_xref="CDD:199167"
     misc_feature    1217..1402
                     /gene="ECM2"
                     /note="Leucine rich repeat; Region: LRR_8; pfam13855"
                     /db_xref="CDD:206026"
     misc_feature    order(1241..1243,1313..1315,1454..1456,1517..1519,
                     1523..1525,1595..1597)
                     /gene="ECM2"
                     /note="Substrate binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:29015"
     misc_feature    1289..1351
                     /gene="ECM2"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (O94769.1);
                     Region: LRR 1"
     misc_feature    1367..1432
                     /gene="ECM2"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (O94769.1);
                     Region: LRR 2"
     misc_feature    1433..1615
                     /gene="ECM2"
                     /note="Leucine rich repeat; Region: LRR_8; pfam13855"
                     /db_xref="CDD:206026"
     misc_feature    1433..1495
                     /gene="ECM2"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (O94769.1);
                     Region: LRR 3"
     misc_feature    1502..1564
                     /gene="ECM2"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (O94769.1);
                     Region: LRR 4"
     misc_feature    1580..1639
                     /gene="ECM2"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (O94769.1);
                     Region: LRR 5"
     misc_feature    1643..1828
                     /gene="ECM2"
                     /note="Leucine rich repeat; Region: LRR_8; pfam13855"
                     /db_xref="CDD:206026"
     misc_feature    1643..1708
                     /gene="ECM2"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (O94769.1);
                     Region: LRR 6"
     misc_feature    1715..1777
                     /gene="ECM2"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (O94769.1);
                     Region: LRR 7"
     misc_feature    1793..1966
                     /gene="ECM2"
                     /note="Leucine rich repeat; Region: LRR_8; pfam13855"
                     /db_xref="CDD:206026"
     misc_feature    1793..1858
                     /gene="ECM2"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (O94769.1);
                     Region: LRR 8"
     misc_feature    1859..1921
                     /gene="ECM2"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (O94769.1);
                     Region: LRR 9"
     misc_feature    1928..2062
                     /gene="ECM2"
                     /note="Leucine Rich repeats (2 copies); Region: LRR_4;
                     pfam12799"
                     /db_xref="CDD:205079"
     misc_feature    1931..1993
                     /gene="ECM2"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (O94769.1);
                     Region: LRR 10"
     misc_feature    2012..2077
                     /gene="ECM2"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (O94769.1);
                     Region: LRR 11"
     misc_feature    2081..2146
                     /gene="ECM2"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (O94769.1);
                     Region: LRR 12"
     misc_feature    2168..2239
                     /gene="ECM2"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (O94769.1);
                     Region: LRR 13"
     variation       complement(245)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:373531348"
     variation       complement(337)
                     /gene="ECM2"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:199523075"
     variation       complement(354)
                     /gene="ECM2"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:10120210"
     variation       complement(372)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:137948457"
     variation       complement(417)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:200534289"
     variation       complement(426)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:150291467"
     variation       complement(463)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:9299405"
     variation       complement(474)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:201265258"
     exon            480..668
                     /gene="ECM2"
                     /inference="alignment:Splign:1.39.8"
     variation       complement(513)
                     /gene="ECM2"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:35496743"
     variation       complement(529)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:143418555"
     variation       complement(537)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:149220459"
     variation       complement(544)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:34729575"
     variation       complement(622)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:201771443"
     variation       complement(651)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:147710026"
     variation       complement(652)
                     /gene="ECM2"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:968040"
     variation       complement(660)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:368912147"
     variation       complement(667)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:139951554"
     exon            669..1241
                     /gene="ECM2"
                     /inference="alignment:Splign:1.39.8"
     variation       complement(683)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:147912487"
     variation       complement(699)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:200349130"
     variation       complement(706)
                     /gene="ECM2"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:371633512"
     variation       complement(747)
                     /gene="ECM2"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:149769253"
     variation       complement(754)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:201071759"
     variation       complement(762)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:139720616"
     variation       complement(792)
                     /gene="ECM2"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:200225062"
     variation       complement(797)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:368116708"
     variation       complement(798)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:34758505"
     variation       complement(812)
                     /gene="ECM2"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:13293047"
     variation       complement(813)
                     /gene="ECM2"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:200124000"
     variation       complement(816)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:375328673"
     variation       complement(825)
                     /gene="ECM2"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:13291847"
     variation       complement(826)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:372289924"
     variation       complement(835)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:368303849"
     variation       complement(851)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:142198335"
     variation       complement(857)
                     /gene="ECM2"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:13298061"
     variation       complement(858)
                     /gene="ECM2"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:376085476"
     variation       complement(868)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:182133503"
     variation       complement(896)
                     /gene="ECM2"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:145991428"
     variation       complement(902)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:367636482"
     variation       complement(918)
                     /gene="ECM2"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:13297924"
     variation       complement(976)
                     /gene="ECM2"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:374472469"
     variation       complement(983)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:142591312"
     variation       complement(1001..1002)
                     /gene="ECM2"
                     /replace=""
                     /replace="gtg"
                     /db_xref="dbSNP:200095306"
     variation       complement(1007)
                     /gene="ECM2"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:137929518"
     variation       complement(1009)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:34355623"
     variation       complement(1019)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:149244773"
     variation       complement(1062)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:369927306"
     variation       complement(1082)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:138357265"
     variation       complement(1083)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:372997619"
     variation       complement(1095)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:143789386"
     variation       complement(1102)
                     /gene="ECM2"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:41280067"
     variation       complement(1122)
                     /gene="ECM2"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:142608064"
     variation       complement(1130)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:138567683"
     variation       complement(1141)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:148975367"
     variation       complement(1203)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:201012391"
     variation       complement(1217)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:147083553"
     variation       complement(1234)
                     /gene="ECM2"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:372699831"
     exon            1242..1357
                     /gene="ECM2"
                     /inference="alignment:Splign:1.39.8"
     variation       complement(1247)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:141793116"
     variation       complement(1253)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:142186054"
     variation       complement(1309)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:73651314"
     variation       complement(1312)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:2296667"
     variation       complement(1338)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:199972367"
     variation       complement(1344)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:146339911"
     exon            1358..1493
                     /gene="ECM2"
                     /inference="alignment:Splign:1.39.8"
     variation       complement(1373)
                     /gene="ECM2"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:139215803"
     variation       complement(1377)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:41278707"
     variation       complement(1421)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:370587410"
     variation       complement(1460)
                     /gene="ECM2"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:142108843"
     variation       complement(1470)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:376172195"
     variation       complement(1474)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:146040741"
     variation       complement(1480)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:113660659"
     variation       complement(1486)
                     /gene="ECM2"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:144093801"
     exon            1494..1651
                     /gene="ECM2"
                     /inference="alignment:Splign:1.39.8"
     variation       complement(1528)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:35161698"
     variation       complement(1541)
                     /gene="ECM2"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:373455336"
     variation       complement(1549)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:369126996"
     variation       complement(1553)
                     /gene="ECM2"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:199745267"
     variation       complement(1592)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:150773107"
     variation       complement(1595)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:376333101"
     variation       complement(1627)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:141184307"
     variation       complement(1639)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:148225586"
     variation       complement(1651)
                     /gene="ECM2"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:373635817"
     exon            1652..1791
                     /gene="ECM2"
                     /inference="alignment:Splign:1.39.8"
     variation       complement(1697)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:369347015"
     variation       complement(1708)
                     /gene="ECM2"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:143859115"
     variation       complement(1737)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:372302066"
     exon            1792..2118
                     /gene="ECM2"
                     /inference="alignment:Splign:1.39.8"
     variation       complement(1806)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:376628552"
     variation       complement(1814..1815)
                     /gene="ECM2"
                     /replace=""
                     /replace="c"
                     /db_xref="dbSNP:34868349"
     variation       complement(1840)
                     /gene="ECM2"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:199713916"
     variation       complement(1882)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:143452414"
     variation       complement(1895)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:199600306"
     variation       complement(1900)
                     /gene="ECM2"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:373764507"
     variation       complement(1911)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:34518968"
     variation       complement(1948)
                     /gene="ECM2"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:147126273"
     variation       complement(1972)
                     /gene="ECM2"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:141859598"
     variation       complement(1998)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:201745324"
     variation       complement(2014)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:186648835"
     variation       complement(2038)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:138868045"
     variation       complement(2057)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:150249574"
     variation       complement(2069)
                     /gene="ECM2"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:140976209"
     variation       complement(2116)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:370627896"
     variation       complement(2117)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:151070730"
     variation       complement(2118)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:200394678"
     exon            2119..3290
                     /gene="ECM2"
                     /inference="alignment:Splign:1.39.8"
     variation       complement(2145)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:188295382"
     variation       complement(2153)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:201652423"
     STS             2160..2354
                     /gene="ECM2"
                     /standard_name="RH69754"
                     /db_xref="UniSTS:76501"
     variation       complement(2171)
                     /gene="ECM2"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:371904059"
     variation       complement(2182)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:202159188"
     variation       complement(2231)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:144194365"
     variation       complement(2248)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:375516326"
     variation       complement(2250)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:200233948"
     variation       complement(2261)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:183564221"
     variation       complement(2316)
                     /gene="ECM2"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:371188020"
     variation       complement(2319)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:191738373"
     variation       complement(2325)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:376951503"
     variation       complement(2453)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:189401619"
     variation       complement(2545)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:369858665"
     variation       complement(2658..2659)
                     /gene="ECM2"
                     /replace=""
                     /replace="t"
                     /db_xref="dbSNP:35985375"
     variation       complement(2698)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:79708497"
     variation       complement(2759)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:185286072"
     variation       complement(2765)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:10429459"
     variation       complement(2808)
                     /gene="ECM2"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:150099514"
     variation       complement(2839)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:192990935"
     variation       complement(2887)
                     /gene="ECM2"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:41278705"
     variation       complement(2931)
                     /gene="ECM2"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:183520336"
     variation       complement(2978)
                     /gene="ECM2"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:41278703"
     STS             3148..3273
                     /gene="ECM2"
                     /standard_name="SHGC-34584"
                     /db_xref="UniSTS:81055"
     STS             3148..3267
                     /gene="ECM2"
                     /standard_name="RH47432"
                     /db_xref="UniSTS:17932"
     polyA_signal    3268..3273
                     /gene="ECM2"
     polyA_site      3290
                     /gene="ECM2"
ORIGIN      
gggaggcagttattttagattttactaagaagttcagcaaatacttttcaacattcccttctgtcctttctttgtttttaaagaaagctctgattttgtttcattttcagctggagacttaaatgacaccaagcaaagcctacttagtttagatctccagaaattggctggtggaaaaaaatcaaacatgaagattgcagttttgttttgtttttttctgcttatcatttttcaaactgactttggaaaaaatgaagaaattcctaggaagcaaaggaggaagatctaccacagaaggttgaggaaaagttcaacctcacacaagcacagatcaaacagacagcttggaattcagcaaacaacagtttttacaccagtagcaagacttcctattgttaactttgattatagcatggaggaaaagtttgaatccttttcaagttttcctggagtagaatcaagttataatgtgttaccaggaaagaagggacactgtttggtaaagggcataaccatgtacaacaaagctgtgtggtcgcctgagccctgcactacctgcctctgctcagatggaagagttctttgtgatgaaaccatgtgccatccccagaggtgcccccaaacagttatacctgaaggggaatgctgcccggtctgctccgctactgtctcctattctctactcagtggtatagcattaaatgatagaaatgaattttctggtgattcttcagaacaaagagaacctaccaatttacttcataagcaactgccacctcctcaggtgggaatggaccgaatagtaagaaaagaagcacttcaatctgaggaggatgaagaagtgaaagaagaagatacagagcaaaagagagagacccctgaatctagaaatcaggggcaactttacagtgagggggacagcagaggaggagacagaaagcagaggcctggagaggagaggaggctggcacaccagcaacaacgccaaggaagggaggaggaggaggatgaggaggaggagggtgaggagggtgaggaggatgaggaggacgaggaggacccggtaagaggagatatgttccgaatgccctctcgatccccgcttcctgctcctcccagaggcacactgcgcctgccaagcgggtgctctctgtcctacaggaccatcagctgcatcaacgccatgcttacccagataccaccgctgacagcaccacagataacaagtctggagctcactggcaattccatcgcctccatcccagatgaagcatttaatggattaccaaatttggaaaggcttgatctgagtaaaaataatatcacttcttcaggcataggtccaaaagcattcaagcttctgaagaagttaatgcgtttgaatatggatggaaataatttgatacagattccttcacaattgccatctacattagaagaacttaaagtcaatgagaacaatcttcaggctatcgatgaagaaagtttatcagacttaaatcagttggtcaccttagaattggaaggaaacaatctcagtgaagccaatgtcaatcctttagctttcaaacctttgaagagcctagcctacttgcgtctgggaaaaaataaatttagaattataccgcagggtcttcctggttctattgaggaattatacctagaaaataaccaaattgaagaaataactgaaatttgtttcaatcataccagaaagatcaatgtcattgtactacgttataacaaaattgaagaaaataggattgctcctttagcctggataaatcaagaaaatctagaatccattgatctctcctacaacaagctctatcacgtcccgtcctatctacccaagtccttgctgcacctagtactccttgggaaccagattgaacggatccctggctatgtgtttggccacatggaaccaggcctggaatacttgtacctgtcatttaacaaacttgctgatgatggcatggaccgtgtctccttctatggggcatatcattctctgagagaattatttctggatcacaatgacttaaaatctataccacctgggatacaagaaatgaaagcactacattttctgaggctgaacaacaacaagatacggaacattcttccagaagaaatttgcaatgctgaagaggatgatgactcaaatctggaacatcttcatcttgaaaacaattatattaaaattagagaaataccatcttacacattttcatgcataagatcatactcaagtatcgttcttaaaccacaaaacatcaagtaattccaagttttcctttgctgtttataaactttactcatgtatttgtagtagctgcatttgtcattaataagagagacataatcctcctgttatactcagtatcattatatgctagtcaacctgattcactaacacacagatgaacaaccaaaatatacctaaaaggtatagtctctaggagttttattaatagtaaaggtaaaatctctcagtttcctacctctagaaagaggccatctcactagaataggatattatgcatactgagctagaccagaagagtctggaacaaaataaacacagcctttataatcaacttgaatactggtgttagctgagaactctgtaagtccctttaaaaattatgtatcttttggttcaagattaagaagcataatgacaacaaaaaaagcaggcagaatttatgaataagtgttgtttattattaaaacaataatttgttaatttcttataaggtcctgtgctataattactggtataaatataactgaatattggggtagctttcatttcttccattaattacatgtgtaaaattaaaacactactgtaatgttaatttcctggttttgaaaatcatattatggttatgtacattgttaacattaaggaaagctggcagaagggtgtgcataaattctatactctttttgaaacttttctataattctaaaattattttttaaagttaaacagtatattaagattaccttcactattcctcactcaagattaagacattttttgaaaagcagtagagtttgcttaaaatacaaattaattattcttgactataaccttgtaaaggtaaatctaatgtataaatttttgaaaaattttgcaccactggtcatagcatctatctcctttgccttaatttactgaaatacatcattttattcggttcaattgaaataaagctatgtctttactatgtattggccctaccaaaatcatatattaaaattttctaacataatgaaaaaaaaaaaaaaaaaa
//

Annotations:

ANNOTATIONS from NCBI Entrez Gene (20130726):
            GeneID:1842 -> Molecular function: GO:0005178 [integrin binding] evidence: TAS
            GeneID:1842 -> Molecular function: GO:0008201 [heparin binding] evidence: IEA
            GeneID:1842 -> Molecular function: GO:0070052 [collagen V binding] evidence: IEA
            GeneID:1842 -> Biological process: GO:0007160 [cell-matrix adhesion] evidence: TAS
            GeneID:1842 -> Biological process: GO:0010811 [positive regulation of cell-substrate adhesion] evidence: IEA
            GeneID:1842 -> Biological process: GO:0030198 [extracellular matrix organization] evidence: IEA
            GeneID:1842 -> Cellular component: GO:0005578 [proteinaceous extracellular matrix] evidence: TAS
            GeneID:1842 -> Cellular component: GO:0005614 [interstitial matrix] evidence: IEA

by @meso_cacase at DBCLS
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