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2024-03-29 16:53:54, GGRNA : RefSeq release 60 (20130726)

LOCUS       NM_001270945            3036 bp    mRNA    linear   PRI 17-APR-2013
DEFINITION  Homo sapiens uncharacterized LOC643355 (LOC643355), mRNA.
ACCESSION   NM_001270945 XR_110489 XR_112101
VERSION     NM_001270945.1  GI:400529119
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3036)
  AUTHORS   Cirulli,E.T., Kasperaviciute,D., Attix,D.K., Need,A.C., Ge,D.,
            Gibson,G. and Goldstein,D.B.
  TITLE     Common genetic variation and performance on standardized cognitive
            tests
  JOURNAL   Eur. J. Hum. Genet. 18 (7), 815-820 (2010)
   PUBMED   20125193
  REMARK    Erratum:[Eur J Hum Genet. 2010 Jul;18(7):820]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC034233.1 and AL512665.11.
            On or before Aug 15, 2012 this sequence version replaced
            gi:310113800, gi:310118633.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC034233.1, BI457656.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           ERS025084, ERS025085 [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-88                BC034233.1         33-120
            89-89               AL512665.11        23236-23236
            90-981              BC034233.1         122-1013
            982-2908            AL512665.11        29368-31294
            2909-3036           BC034233.1         2940-3067
FEATURES             Location/Qualifiers
     source          1..3036
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
                     /map="1p13.2"
     gene            1..3036
                     /gene="LOC643355"
                     /note="uncharacterized LOC643355"
                     /db_xref="GeneID:643355"
     exon            1..620
                     /gene="LOC643355"
                     /inference="alignment:Splign:1.39.8"
     variation       12
                     /gene="LOC643355"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:12738713"
     misc_feature    150..152
                     /gene="LOC643355"
                     /note="upstream in-frame stop codon"
     variation       212
                     /gene="LOC643355"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:116067474"
     CDS             330..707
                     /gene="LOC643355"
                     /codon_start=1
                     /product="uncharacterized protein LOC643355"
                     /protein_id="NP_001257874.1"
                     /db_xref="GI:400529120"
                     /db_xref="GeneID:643355"
                     /translation="
MGPHCSVPRRPRMGSGKVSMCPQGQVSGPDSHPQGGGAQRAQSPPLGGPAAPAFPVSPASVPGILDLGLALRKRGSSVPQQGRGTLGLRDHISGCGENVNHISRISPPWAQPGHGPLKMFLIAGS
"
     variation       331
                     /gene="LOC643355"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:61742877"
     variation       336
                     /gene="LOC643355"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:61741472"
     variation       460
                     /gene="LOC643355"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:74527086"
     variation       539
                     /gene="LOC643355"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:59747755"
     variation       557
                     /gene="LOC643355"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:61746626"
     variation       611
                     /gene="LOC643355"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:144630848"
     exon            621..3036
                     /gene="LOC643355"
                     /inference="alignment:Splign:1.39.8"
     variation       633
                     /gene="LOC643355"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:2366125"
     variation       717
                     /gene="LOC643355"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:374575631"
     variation       754
                     /gene="LOC643355"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:184702027"
     variation       982
                     /gene="LOC643355"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:7528073"
     variation       998
                     /gene="LOC643355"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:189186293"
     variation       1209
                     /gene="LOC643355"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:192561587"
     variation       1240
                     /gene="LOC643355"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:17676924"
     variation       1354
                     /gene="LOC643355"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:141399443"
     variation       1359
                     /gene="LOC643355"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:184863434"
     variation       1397
                     /gene="LOC643355"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:189957575"
     variation       1401..1405
                     /gene="LOC643355"
                     /replace=""
                     /replace="catcc"
                     /db_xref="dbSNP:58897636"
     variation       1413
                     /gene="LOC643355"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:3000748"
     variation       1440
                     /gene="LOC643355"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:77988003"
     variation       1532
                     /gene="LOC643355"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:181200703"
     variation       1536
                     /gene="LOC643355"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:17029248"
     variation       1551
                     /gene="LOC643355"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:143613416"
     variation       1733
                     /gene="LOC643355"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:368456400"
     variation       1868
                     /gene="LOC643355"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:116377623"
     variation       2048
                     /gene="LOC643355"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:148074299"
     variation       2087
                     /gene="LOC643355"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:370209712"
     variation       2103
                     /gene="LOC643355"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:920823"
     variation       2165
                     /gene="LOC643355"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:59392743"
     variation       2437
                     /gene="LOC643355"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:186249844"
     variation       2444
                     /gene="LOC643355"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:142336559"
     variation       2471..2472
                     /gene="LOC643355"
                     /replace=""
                     /replace="tt"
                     /replace="ttt"
                     /replace="tttt"
                     /replace="ttttttt"
                     /db_xref="dbSNP:71972559"
     variation       2496
                     /gene="LOC643355"
                     /replace=""
                     /replace="t"
                     /replace="ttt"
                     /replace="tttt"
                     /replace="tttttta"
                     /replace="ttttttt"
                     /db_xref="dbSNP:59638601"
     variation       2497
                     /gene="LOC643355"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:75759660"
     variation       2542
                     /gene="LOC643355"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:12094836"
     variation       2635
                     /gene="LOC643355"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:114160679"
     variation       2644
                     /gene="LOC643355"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:61552954"
     variation       2693
                     /gene="LOC643355"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:371764950"
     variation       2704
                     /gene="LOC643355"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:12095910"
     variation       2737
                     /gene="LOC643355"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:140526411"
     variation       2854
                     /gene="LOC643355"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:189051497"
     variation       2908
                     /gene="LOC643355"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:3008529"
     variation       2983
                     /gene="LOC643355"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:77836014"
     variation       2999
                     /gene="LOC643355"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:78527389"
     variation       3029
                     /gene="LOC643355"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:79874491"
ORIGIN      
ggcagcagcacctgcttgagaccaagcccggcgacctggcaaggtggggccccctaccgcgcaatctttgcggctggcccccggctctcagctccgagtgcagaggctgaagaggtacccgggggacacactgcctctaaccccacctatgagccgctctcctctcggaggacgaaggcaccatcagaaggtcgagattcgccctcctctcccgccacgtctacccactacctagaccgggagtctggacttgggagcgtgaactctcacccgagccggtccccttacaactggagcccgcccagcccctcagtccctccctgaagcccatgggtccccactgctccgtgcctcgtcgacccaggatggggagtgggaaggtcagcatgtgcccacagggccaggtgtccggcccagattcccaccctcagggcggcggcgcgcaaagggcgcagtccccgccgctgggcggacccgcggctccggctttcccggtgtctccagcctcggtgcccggaatcctggatctcggcctggcgctccggaagcgaggcagctccgtgccccagcagggacggggaacgcttggcttgagagatcacatttctgggtgtggagagaatgtcaatcacatatccagaatatcacctccttgggcacagccagggcatggtccattgaaaatgttcctgattgctggaagctgacggctcaccataaaagccaaaatggggacctgtcaaaaatgttttagccaaactatggcttggctcaggaagatgccaagaccaaaggctgctgaactttaagtataaacttgcatgaaaagcacattgcaggtctgagacagtggaggcttagtggtgagaacatgagctctggatagacctggcttcaagtcttggctctgtcattcaccagctgtgtgaatttgggcaaaccacttttcttctctgatgctcagttccctcacctagcaaaatgggttataatgatggcatcaactcataaggttcatgaggactgagctagataatgcaaacaacatgtttcatatacaataataaataaaaatgttggctgttataatattgtcactgagtctacatgtatctgaaactagctcttttaaatcctgggtacagctttacaagcagtattgtgtagtttagacagatcacctgagttctttctatgtaattattgtttctactgaaccttggtaaatgtgtgaaatcacagaagtttgtccctagacactcccctcaccccactggctcctctctccattctgtgcaaccccatttctgcagccttgagcttcagcccatttctctccatttcctcctcattagcaagaactgataaaattatttgaactgatatgtaagtgaccatctcatccagagatatagtattcacattttagtaggtcagagccttaagccaaggcagtgaaatagagtggatggtacttcaagcattcatcaaagtaatggggaaagtttggggtcccaggagactcttcccaattccacagagtcctgcccattcataaaactggtactattgatgcattataagcaacaaggtggtccgtgtttgaattctgcagctggaaaatcaagtctccagcttttgcaaaagtgttgtaatagggaaacttggacactaattttatataccaacctcttcttggtaaagagacatagctcatgagcaccaaggcctttccagcattgcacatctatgatacttatactcaagtgcatttttttcttcagagctcaaggctagagttgggtgtttttgcctcactgggtttgtaggagactcagctacaaagtcattaattgctttggtgaatcaacaagtaaagaaagacagtccagctattgtccccacactgcaaaatcataagaggcttctggacttctccacaaaatcctcattaaagatgagtcctcatggctcttacagaattctttattatgtcctttgtgctgagactgcaaggtaaagaaagaaaaaagggaaataactaaatttgttatcatggaaaatttcaaacatacaaaagatgaaagaattgtataatatacccccatgaacttgtcatttagctttgaaagttaccaactcatggccaatcatttttcatctgtaccctactcacacactcccccaccataattttgaaacaaattccaaatataatttcatctgtaaatatttctgtgattgcacctttgttatggccaacaaaatccatctttctagaagagaagtcattcttccctccctccatgatgctaagaacatttggccagtacctgcatccatgcccaggagtggtctctgggttaggcaagcttgagggtttactgaatgttatccaaagtttgtccttttccttgggtagaaaaaggaacccataaaatgtctggtagaggtgccactgtgtgcaagcttttttttttttttttttttttttttgtcagcagggatgatgctcaatagctgtgatgaggtccaagctgagagaaaagagtcatgatcatgaatcccaactggattcatcattttccacatactttacttcatttagctttcaccaattctcatgttagttccattttacagataagaaaactaagacctaagctcacccagctagtagttacttgtggcagagacagactagatgccaatcaaattcagttcctcttttctgtagatacagttagattactttcccaggttctcttgcagttaggtttggtcatctgactaagttctagccaaagtaatataggccagtcccatgaaaaacatctagggcaatttagcatgttctttctttctccatccactggctgaatggaaaaaatttcaagggcttagaaggggacagagccacaagaaggaaggaacttgggtccctgggtgactatgtgaagtagaggtccctcccaacttcctttgaactgtgaaatacgcaaaataaataaataaataaatttttattatgtgaaa
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