2024-03-29 14:07:08, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_001270482 4035 bp mRNA linear PRI 17-APR-2013 DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit, non-ATPase, 11 (PSMD11), transcript variant 1, mRNA. ACCESSION NM_001270482 VERSION NM_001270482.1 GI:394953907 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4035) AUTHORS Vilchez,D., Boyer,L., Morantte,I., Lutz,M., Merkwirth,C., Joyce,D., Spencer,B., Page,L., Masliah,E., Berggren,W.T., Gage,F.H. and Dillin,A. TITLE Increased proteasome activity in human embryonic stem cells is regulated by PSMD11 JOURNAL Nature 489 (7415), 304-308 (2012) PUBMED 22972301 REMARK GeneRIF: human embryonic stem cells (hESCs) exhibit high proteasome activity that is correlated with increased levels of the 19S proteasome subunit PSMD11 (known as RPN-6 in Caenorhabditis elegans) and a corresponding increased assembly of the 26S/30S proteasome REFERENCE 2 (bases 1 to 4035) AUTHORS Moreno,D., Viana,R. and Sanz,P. TITLE Two-hybrid analysis identifies PSMD11, a non-ATPase subunit of the proteasome, as a novel interaction partner of AMP-activated protein kinase JOURNAL Int. J. Biochem. Cell Biol. 41 (12), 2431-2439 (2009) PUBMED 19616115 REMARK GeneRIF: AMP-activated protein kinase is able to interact physically with this subunit and modify its phosphorylation status. REFERENCE 3 (bases 1 to 4035) AUTHORS Listovsky,T., Oren,Y.S., Yudkovsky,Y., Mahbubani,H.M., Weiss,A.M., Lebendiker,M. and Brandeis,M. TITLE Mammalian Cdh1/Fzr mediates its own degradation JOURNAL EMBO J. 23 (7), 1619-1626 (2004) PUBMED 15029244 REFERENCE 4 (bases 1 to 4035) AUTHORS Conticello,S.G., Harris,R.S. and Neuberger,M.S. TITLE The Vif protein of HIV triggers degradation of the human antiretroviral DNA deaminase APOBEC3G JOURNAL Curr. Biol. 13 (22), 2009-2013 (2003) PUBMED 14614829 REFERENCE 5 (bases 1 to 4035) AUTHORS Madani,N. and Kabat,D. TITLE An endogenous inhibitor of human immunodeficiency virus in human lymphocytes is overcome by the viral Vif protein JOURNAL J. Virol. 72 (12), 10251-10255 (1998) PUBMED 9811770 REFERENCE 6 (bases 1 to 4035) AUTHORS Saito,A., Watanabe,T.K., Shimada,Y., Fujiwara,T., Slaughter,C.A., DeMartino,G.N., Tanahashi,N. and Tanaka,K. TITLE cDNA cloning and functional analysis of p44.5 and p55, two regulatory subunits of the 26S proteasome JOURNAL Gene 203 (2), 241-250 (1997) PUBMED 9426256 REFERENCE 7 (bases 1 to 4035) AUTHORS Seeger,M., Ferrell,K., Frank,R. and Dubiel,W. TITLE HIV-1 tat inhibits the 20 S proteasome and its 11 S regulator-mediated activation JOURNAL J. Biol. Chem. 272 (13), 8145-8148 (1997) PUBMED 9079628 REFERENCE 8 (bases 1 to 4035) AUTHORS Hoffman,L. and Rechsteiner,M. TITLE Molecular cloning and expression of subunit 9 of the 26S proteasome JOURNAL FEBS Lett. 404 (2-3), 179-184 (1997) PUBMED 9119060 REFERENCE 9 (bases 1 to 4035) AUTHORS Coux,O., Tanaka,K. and Goldberg,A.L. TITLE Structure and functions of the 20S and 26S proteasomes JOURNAL Annu. Rev. Biochem. 65, 801-847 (1996) PUBMED 8811196 REMARK Review article REFERENCE 10 (bases 1 to 4035) AUTHORS Kanayama,H.O., Tamura,T., Ugai,S., Kagawa,S., Tanahashi,N., Yoshimura,T., Tanaka,K. and Ichihara,A. TITLE Demonstration that a human 26S proteolytic complex consists of a proteasome and multiple associated protein components and hydrolyzes ATP and ubiquitin-ligated proteins by closely linked mechanisms JOURNAL Eur. J. Biochem. 206 (2), 567-578 (1992) PUBMED 1317798 COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The reference sequence was derived from BP246240.1, AK290602.1, AC079336.5 and BQ006240.1. Summary: The 26S proteasome is a multicatalytic proteinase complex with a highly ordered structure composed of 2 complexes, a 20S core and a 19S regulator. The 20S core is composed of 4 rings of 28 non-identical subunits; 2 rings are composed of 7 alpha subunits and 2 rings are composed of 7 beta subunits. The 19S regulator is composed of a base, which contains 6 ATPase subunits and 2 non-ATPase subunits, and a lid, which contains up to 10 non-ATPase subunits. Proteasomes are distributed throughout eukaryotic cells at a high concentration and cleave peptides in an ATP/ubiquitin-dependent process in a non-lysosomal pathway. This gene encodes a member of the proteasome subunit S9 family that functions as a non-ATPase subunit of the 19S regulator and is phosphorylated by AMP-activated protein kinase. Alternatively spliced transcript variants have been observed for this gene. [provided by RefSeq, Jul 2012]. Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. Publication Note: This RefSeq record includes a subset of the publications that are available for this gene. Please see the Gene record to access additional publications. ##Evidence-Data-START## Transcript exon combination :: AK290602.1, BX334992.2 [ECO:0000332] RNAseq introns :: single sample supports all introns ERS025081, ERS025082 [ECO:0000348] ##Evidence-Data-END## COMPLETENESS: complete on the 3' end. PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-11 BP246240.1 4-14 12-1349 AK290602.1 1-1338 1350-3364 AC079336.5 58676-60690 3365-4035 BQ006240.1 1-671 c FEATURES Location/Qualifiers source 1..4035 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="17" /map="17q11.2" gene 1..4035 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /note="proteasome (prosome, macropain) 26S subunit, non-ATPase, 11" /db_xref="GeneID:5717" /db_xref="HGNC:9556" /db_xref="MIM:604449" exon 1..152 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /inference="alignment:Splign:1.39.8" variation 32 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:368428306" CDS 62..1330 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /note="26S proteasome regulatory subunit 9; 26S proteasome regulatory subunit S9; 26S proteasome regulatory subunit p44.5; 26S proteasome regulatory subunit RPN6" /codon_start=1 /product="26S proteasome non-ATPase regulatory subunit 11" /protein_id="NP_001257411.1" /db_xref="GI:394953908" /db_xref="CCDS:CCDS11272.1" /db_xref="GeneID:5717" /db_xref="HGNC:9556" /db_xref="MIM:604449" /translation="
MAAAAVVEFQRAQSLLSTDREASIDILHSIVKRDIQENDEEAVQVKEQSILELGSLLAKTGQAAELGGLLKYVRPFLNSISKAKAARLVRSLLDLFLDMEAATGQEVELCLECIEWAKSEKRTFLRQALEARLVSLYFDTKRYQEALHLGSQLLRELKKMDDKALLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCPPKLQATLDMQSGIIHAAEEKDWKTAYSYFYEAFEGYDSIDSPKAITSLKYMLLCKIMLNTPEDVQALVSGKLALRYAGRQTEALKCVAQASKNRSLADFEKALTDYRAELRDDPIISTHLAKLYDNLLEQNLIRVIEPFSRVQIEHISSLIKLSKADVERKLSQMILDKKFHGILDQGEGVLIIFDEPPVDKTYEAALETIQNMSKVVDSLYNKAKKLT
" misc_feature 65..67 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /experiment="experimental evidence, no additional details recorded" /note="N-acetylalanine; propagated from UniProtKB/Swiss-Prot (O00231.3); acetylation site" misc_feature 101..103 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /experiment="experimental evidence, no additional details recorded" /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot (O00231.3); phosphorylation site" misc_feature 110..1324 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /note="26S proteasome regulatory complex component [Posttranslational modification, protein turnover, chaperones]; Region: RPN6; COG5159" /db_xref="CDD:227488" misc_feature 920..1222 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /note="PCI domain; Region: PCI; pfam01399" /db_xref="CDD:216479" variation 65..66 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="" /replace="c" /db_xref="dbSNP:369131607" variation 76 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="g" /replace="t" /db_xref="dbSNP:143871497" variation 106 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="t" /db_xref="dbSNP:201788002" variation 109 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="g" /db_xref="dbSNP:372127595" variation 111 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:140202481" variation 120 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:201397972" exon 153..254 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /inference="alignment:Splign:1.39.8" exon 255..379 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /inference="alignment:Splign:1.39.8" variation 373 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:373669061" exon 380..451 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /inference="alignment:Splign:1.39.8" variation 382 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="g" /db_xref="dbSNP:143910284" variation 397 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:146863808" variation 403 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:140675261" variation 444 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:377580898" exon 452..509 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /inference="alignment:Splign:1.39.8" variation 480 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="c" /db_xref="dbSNP:142904428" exon 510..704 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /inference="alignment:Splign:1.39.8" variation 524 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="g" /db_xref="dbSNP:200794922" variation 586 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:151071670" variation 664 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:192755593" variation 667 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="c" /replace="g" /db_xref="dbSNP:34078182" variation 703 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:150206106" exon 705..849 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /inference="alignment:Splign:1.39.8" variation 745 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:35385209" variation 787 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:141504283" variation 807 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:376594311" variation 844 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:146169141" exon 850..910 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /inference="alignment:Splign:1.39.8" variation 850 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:138901273" variation 894 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:199698435" exon 911..973 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /inference="alignment:Splign:1.39.8" variation 946 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:34248115" exon 974..1099 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /inference="alignment:Splign:1.39.8" variation 988 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:143543056" variation 1001 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:148020019" variation 1027 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:1803016" variation 1069 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="c" /db_xref="dbSNP:201382857" variation 1071 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:201116985" variation 1076 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:376327399" variation 1080 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:1803015" exon 1100..1135 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /inference="alignment:Splign:1.39.8" exon 1136..1187 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /inference="alignment:Splign:1.39.8" variation 1138 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:368347176" variation 1141 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:200240721" variation 1168 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:150525156" exon 1188..4018 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /inference="alignment:Splign:1.39.8" variation 1225 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:35729014" variation 1309 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="c" /db_xref="dbSNP:78876518" variation 1330 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:139814136" variation 1352 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="g" /db_xref="dbSNP:148367648" variation 1378 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="g" /replace="t" /db_xref="dbSNP:141587003" variation 1379 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="g" /replace="t" /db_xref="dbSNP:150291345" variation 1488 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:11539943" STS 1497..1616 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /standard_name="RH15931" /db_xref="UniSTS:83710" variation 1535 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:1801562" variation 1541 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="c" /db_xref="dbSNP:11539944" variation 1671 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:3209620" variation 1677 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:1140706" variation 1681..1682 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="" /replace="a" /db_xref="dbSNP:71859580" polyA_signal 1699..1704 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" variation 1704 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:181680701" polyA_site 1723 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" variation 1761 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:187088367" variation 1819..1821 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="" /replace="ctc" /db_xref="dbSNP:201362675" variation 1970 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:191071137" variation 1980 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="g" /db_xref="dbSNP:181305779" variation 2081 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:185127088" variation 2205 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="" /replace="t" /db_xref="dbSNP:34280753" STS 2249..2495 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /standard_name="RH80424" /db_xref="UniSTS:90263" variation 2295 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:377368114" variation 2396 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:11539942" variation 2510 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="" /replace="t" /db_xref="dbSNP:71790599" variation 2519 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="t" /db_xref="dbSNP:9912777" variation 2550 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:137942070" variation 2588 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:143515603" variation 2764 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:189830516" variation 2831 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:73984544" polyA_signal 2832..2837 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" polyA_site 2856 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" variation 2988 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="t" /db_xref="dbSNP:147178851" polyA_signal 3051..3056 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" variation 3062 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="" /replace="t" /db_xref="dbSNP:11290468" variation 3073 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:74917045" variation 3074..3075 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="" /replace="t" /db_xref="dbSNP:139282160" variation 3075 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:60871066" variation 3076 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="c" /db_xref="dbSNP:60979290" polyA_site 3079 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" variation 3136 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:4523973" variation 3419 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:72813041" variation 3441 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="g" /db_xref="dbSNP:182443694" variation 3522 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:188705695" variation 3582 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="g" /replace="t" /db_xref="dbSNP:140406244" variation 3660 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:368795628" variation 3748 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="" /replace="c" /db_xref="dbSNP:5819984" variation 3754 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="g" /replace="t" /db_xref="dbSNP:371299240" variation 3768 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:192408991" variation 3819 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="a" /replace="g" /db_xref="dbSNP:142784276" STS 3852..3994 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /standard_name="WI-16331" /db_xref="UniSTS:60493" variation 3876 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="c" /replace="t" /db_xref="dbSNP:373431056" variation 3923..3927 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" /replace="" /replace="aaaag" /db_xref="dbSNP:370748285" polyA_signal 3995..4000 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" polyA_site 4018 /gene="PSMD11" /gene_synonym="p44.5; Rpn6; S9" ORIGIN
tttccgggtgtgtgtttccggcgtcggcggccgcggccggggacggtgtgagagcggtaagatggcggcggcggcggtggtggagttccagagagcccagtctctactcagcaccgaccgggaggcctccatcgacatcctccactccatcgtgaagcgtgacattcaggaaaacgatgaagaggcagtgcaagtcaaagagcagagcatcctggaactgggatctctcctggcaaagactggacaagctgcagagcttggaggactcctgaagtatgtacgacccttcttgaattccatcagcaaggctaaagcagctcgcctggtccgatctcttcttgatctgtttcttgatatggaagcagctacagggcaggaggtcgagctgtgtttagagtgcatcgaatgggccaagtcagagaaaagaactttcttacgccaagctttggaggcaagactggtgtctttgtactttgataccaagaggtaccaggaagcattgcatttgggttctcagctgctgcgggagttgaaaaagatggacgacaaagctcttttggtggaagtacagcttttagaaagcaaaacataccatgccctgagcaacctgccgaaagcccgagctgccttaacttctgctcgaaccacagcaaatgccatctactgcccccctaaattgcaggccaccttggacatgcagtcgggtattatccatgcagcagaagagaaggactggaaaactgcgtactcatacttctatgaggcatttgagggttatgactccatcgacagccccaaggccatcacatctctgaagtacatgttgctgtgcaaaatcatgctcaacaccccagaagatgtccaggctttggtgagcgggaagcttgcacttcggtatgcagggaggcagacagaagcattaaaatgcgtggctcaggctagcaagaacagatcactggcagattttgaaaaggctctgacagattaccgggcagagctccgggatgacccaatcatcagcacacacttggccaagttgtatgataacttactagaacagaatctgatccgagtcattgagcctttttccagagtacagattgaacacatatctagtctcatcaaactctccaaggccgacgtggaaaggaaattatcacagatgattcttgacaagaaatttcatgggattttggaccagggggagggtgtcctgattattttcgatgaacccccagtagataaaacttacgaagctgctctggaaacaattcagaacatgagcaaagtagtggattccctctacaacaaagccaagaaactgacataggtgagtgctggcttcaggaccccagggctgggcagctctgtcttctgcgtgtcgagactgaaaacctcctcctggtgtcctcatggcttcctgattgacactgctctgtcttctcttgcagagttggatctgtagcggtcctttggagagtgtgtgtggcgggagagtgaaaccttgggggaaaatgctaggagattcttttttctttttgttctacttttcgctcggaaagtttttaaatcctcatttggtgcatctgtattccagccaataggtgtgccagttttcatgtaatctttactggcccaacttgggagtggggaaattgcttaaaaaaaaagaaaaagaaaaaaaaaaagattattctaaataaaaggaaaaaggcttacactacctaaagctgtgctctctgcctcctgggagagggccgcaaagccaggcaccccgccaaccactgggggtcctaatccacctgctgggcatcacctctcctcctcctcagaattgggtgtttgctgaccatcaaaagcaatgactttttattctgtttgtactgaaccaaaacaaacaactgtgtatagactgctgttttcttttttatttgaaatgaggcattttggtgttctttcccctaccatacggcctgtctgcccttccctccccacattggctccagcagagtagccgaaggtcctgccgccgccgccaccaccaccaccactgcagcaacaacagcagcagcagcagcagcgcctgcatagctccactctgacctgtgaaggaatggggatgaggccaggagctagtgtctaccacggccacacagggagcagtgtgggcccttagcccccaaggggcctgctatgcatgtggctttttttttttttttaaacacagtaaactagattagtcgtcagtgttttaattgcccctcttctcctctcctgcattcctctcctctcttctttcctctctgtcccttctctttcccctctcaaccaggagaccatcatgtctctctgccttcctcctctcccctccaggggagtcaggctgtctgtgaaagccatgagcttctctccctctcccactcctcctctcctactttcagatggatttattccttttttaaacaatgaacatcggaaatgagactgtggggtgtggtttctctctctcttttttttttaattttctttgttgggtttttgagcaacctcatgtccccttcccagggagctttttaatttacctcttagaactcaagtggatgggaagtagagcactatgtgtcagtatgctttgttttctgacacgattacacagcgaggctttaatgccatttgggtaggtgagcttctgcacttctgttgtgctgaactgtattttcttctctcatctcctctttgtctttttctcttttcctctccttcctgccttcttctgctggcctccttttctctttctttaccttccttggattatccttccaggttttcataataaatttatattttgtaaaaggattttgttgtaccaggttttgcatcctcactgaatctgactggcttttattttcctctccaaaatcaggtttttgttctcaacatctttccccatcatgtctagtcactgttttggttttggcaccatcagtatcaaatgtacaaacggttcttgctaaccaacaccaggtatatctgatgttcagatgagttccaataaaaataatttttttttttttcaaaaggtgtctttttcttgagtgctggagggcttccaagcaagtccagacagctctgtgtggccccacactagtctagctctcatctggccaaagctgttatctcatttgtgtaatgggagtccttaaggtaaatttggggtccaaacttggagggctttgggggcaagaaagttggtgtgtgagttctgaggttggaaatgagttcaggtgtcttcttccagggcagcatggtccagtgagcacatgtaagtttgggcagtagatcctctgagcctactttctcttctactcagtgaggatgctgcttccttggcaggtgattgtgatgtgaagcttagtaagtcatagacgtgcaggtgtctggagagtcctgacatgcagttgtggtttcgtttccttttggaatcttcaaaggcagcgattttcatattgcctcacaccctggcgggggcggggggctctgggaccactgggggacctgctaaatcctcttcagtctgagcagttcagccattgtcagttttagtattgtgtctctgtatttcacttgcagaaagagctttgcttctataaaggactttaaaaagtactccaaagagatctagttttggagtagaggggagatgttttctcaaacttagggcagtcctgagatgctcaggcagtagcccttttctcagttccctttgcgggtcttggtcagatgatgccctctagacccgtgctgtccaatatgtagccgctagccatgtgcagctgtcaggcccttgcaacgtggctggttcgagctgtgatacactgcaagtgtaaacacaaaccagacttcgaaggcttagtatgataacaaaagaaaaggagtgtaaaatatgtcaataacttttttatatatgtgttgaaatattttgggtattgggttaaataaaatatattattaaaattcaaaaaaaaaaaaaaaaaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726): GeneID:5717 -> Biological process: GO:0000082 [G1/S transition of mitotic cell cycle] evidence: TAS GeneID:5717 -> Biological process: GO:0000209 [protein polyubiquitination] evidence: TAS GeneID:5717 -> Biological process: GO:0000278 [mitotic cell cycle] evidence: TAS GeneID:5717 -> Biological process: GO:0002474 [antigen processing and presentation of peptide antigen via MHC class I] evidence: TAS GeneID:5717 -> Biological process: GO:0002479 [antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent] evidence: TAS GeneID:5717 -> Biological process: GO:0006511 [ubiquitin-dependent protein catabolic process] evidence: IMP GeneID:5717 -> Biological process: GO:0006521 [regulation of cellular amino acid metabolic process] evidence: TAS GeneID:5717 -> Biological process: GO:0006915 [apoptotic process] evidence: TAS GeneID:5717 -> Biological process: GO:0006977 [DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest] evidence: TAS GeneID:5717 -> Biological process: GO:0010467 [gene expression] evidence: TAS GeneID:5717 -> Biological process: GO:0016032 [viral process] evidence: TAS GeneID:5717 -> Biological process: GO:0016070 [RNA metabolic process] evidence: TAS GeneID:5717 -> Biological process: GO:0016071 [mRNA metabolic process] evidence: TAS GeneID:5717 -> Biological process: GO:0031145 [anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process] evidence: TAS GeneID:5717 -> Biological process: GO:0034641 [cellular nitrogen compound metabolic process] evidence: TAS GeneID:5717 -> Biological process: GO:0042590 [antigen processing and presentation of exogenous peptide antigen via MHC class I] evidence: TAS GeneID:5717 -> Biological process: GO:0042981 [regulation of apoptotic process] evidence: TAS GeneID:5717 -> Biological process: GO:0043066 [negative regulation of apoptotic process] evidence: TAS GeneID:5717 -> Biological process: GO:0043248 [proteasome assembly] evidence: IMP GeneID:5717 -> Biological process: GO:0044281 [small molecule metabolic process] evidence: TAS GeneID:5717 -> Biological process: GO:0048863 [stem cell differentiation] evidence: IMP GeneID:5717 -> Biological process: GO:0051436 [negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle] evidence: TAS GeneID:5717 -> Biological process: GO:0051437 [positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle] evidence: TAS GeneID:5717 -> Biological process: GO:0051439 [regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle] evidence: TAS GeneID:5717 -> Cellular component: GO:0000502 [proteasome complex] evidence: TAS GeneID:5717 -> Cellular component: GO:0005654 [nucleoplasm] evidence: TAS GeneID:5717 -> Cellular component: GO:0005829 [cytosol] evidence: TAS GeneID:5717 -> Cellular component: GO:0022624 [proteasome accessory complex] evidence: IDA
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