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2024-04-27 11:05:22, GGRNA : RefSeq release 60 (20130726)

LOCUS       NM_001261840            1776 bp    mRNA    linear   PRI 22-JUN-2013
DEFINITION  Homo sapiens brain and reproductive organ-expressed (TNFRSF1A
            modulator) (BRE), transcript variant 6, mRNA.
ACCESSION   NM_001261840
VERSION     NM_001261840.1  GI:387912572
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1776)
  AUTHORS   Jostins,L., Ripke,S., Weersma,R.K., Duerr,R.H., McGovern,D.P.,
            Hui,K.Y., Lee,J.C., Schumm,L.P., Sharma,Y., Anderson,C.A.,
            Essers,J., Mitrovic,M., Ning,K., Cleynen,I., Theatre,E.,
            Spain,S.L., Raychaudhuri,S., Goyette,P., Wei,Z., Abraham,C.,
            Achkar,J.P., Ahmad,T., Amininejad,L., Ananthakrishnan,A.N.,
            Andersen,V., Andrews,J.M., Baidoo,L., Balschun,T., Bampton,P.A.,
            Bitton,A., Boucher,G., Brand,S., Buning,C., Cohain,A., Cichon,S.,
            D'Amato,M., De Jong,D., Devaney,K.L., Dubinsky,M., Edwards,C.,
            Ellinghaus,D., Ferguson,L.R., Franchimont,D., Fransen,K.,
            Gearry,R., Georges,M., Gieger,C., Glas,J., Haritunians,T., Hart,A.,
            Hawkey,C., Hedl,M., Hu,X., Karlsen,T.H., Kupcinskas,L.,
            Kugathasan,S., Latiano,A., Laukens,D., Lawrance,I.C., Lees,C.W.,
            Louis,E., Mahy,G., Mansfield,J., Morgan,A.R., Mowat,C., Newman,W.,
            Palmieri,O., Ponsioen,C.Y., Potocnik,U., Prescott,N.J.,
            Regueiro,M., Rotter,J.I., Russell,R.K., Sanderson,J.D., Sans,M.,
            Satsangi,J., Schreiber,S., Simms,L.A., Sventoraityte,J.,
            Targan,S.R., Taylor,K.D., Tremelling,M., Verspaget,H.W., De Vos,M.,
            Wijmenga,C., Wilson,D.C., Winkelmann,J., Xavier,R.J., Zeissig,S.,
            Zhang,B., Zhang,C.K., Zhao,H., Silverberg,M.S., Annese,V.,
            Hakonarson,H., Brant,S.R., Radford-Smith,G., Mathew,C.G.,
            Rioux,J.D., Schadt,E.E., Daly,M.J., Franke,A., Parkes,M.,
            Vermeire,S., Barrett,J.C. and Cho,J.H.
  CONSRTM   International IBD Genetics Consortium (IIBDGC)
  TITLE     Host-microbe interactions have shaped the genetic architecture of
            inflammatory bowel disease
  JOURNAL   Nature 491 (7422), 119-124 (2012)
   PUBMED   23128233
REFERENCE   2  (bases 1 to 1776)
  AUTHORS   Noordermeer,S.M., Monteferrario,D., Sanders,M.A., Bullinger,L.,
            Jansen,J.H. and van der Reijden,B.A.
  TITLE     Improved classification of MLL-AF9-positive acute myeloid leukemia
            patients based on BRE and EVI1 expression
  JOURNAL   Blood 119 (18), 4335-4337 (2012)
   PUBMED   22555662
  REMARK    GeneRIF: High BRE and high EVI1 expression are mutually exclusive
            in MLL-AF9-positive acute myeloid leukemia patients.
REFERENCE   3  (bases 1 to 1776)
  AUTHORS   Noordermeer,S.M., Sanders,M.A., Gilissen,C., Tonnissen,E., van der
            Heijden,A., Dohner,K., Bullinger,L., Jansen,J.H., Valk,P.J. and van
            der Reijden,B.A.
  TITLE     High BRE expression predicts favorable outcome in adult acute
            myeloid leukemia, in particular among MLL-AF9-positive patients
  JOURNAL   Blood 118 (20), 5613-5621 (2011)
   PUBMED   21937695
  REMARK    GeneRIF: High BRE expression defines a novel subtype of adult acute
            myeloid leukemia characterized by a favorable prognosis.
REFERENCE   4  (bases 1 to 1776)
  AUTHORS   Hu,X., Kim,J.A., Castillo,A., Huang,M., Liu,J. and Wang,B.
  TITLE     NBA1/MERIT40 and BRE interaction is required for the integrity of
            two distinct deubiquitinating enzyme BRCC36-containing complexes
  JOURNAL   J. Biol. Chem. 286 (13), 11734-11745 (2011)
   PUBMED   21282113
  REMARK    GeneRIF: NBA1/MERIT40 and BRE interaction is required for the
            integrity of two distinct deubiquitinating enzyme BRCC36-containing
            complexes
REFERENCE   5  (bases 1 to 1776)
  AUTHORS   Balgobind,B.V., Zwaan,C.M., Reinhardt,D., Arentsen-Peters,T.J.,
            Hollink,I.H., de Haas,V., Kaspers,G.J., de Bont,E.S., Baruchel,A.,
            Stary,J., Meyer,C., Marschalek,R., Creutzig,U., den Boer,M.L.,
            Pieters,R. and van den Heuvel-Eibrink,M.M.
  TITLE     High BRE expression in pediatric MLL-rearranged AML is associated
            with favorable outcome
  JOURNAL   Leukemia 24 (12), 2048-2055 (2010)
   PUBMED   20861917
  REMARK    GeneRIF: overexpression of the BRE gene is predominantly found in
            MLL-rearranged AML with t(9;11)(p22;q23).
REFERENCE   6  (bases 1 to 1776)
  AUTHORS   Dong,Y., Hakimi,M.A., Chen,X., Kumaraswamy,E., Cooch,N.S.,
            Godwin,A.K. and Shiekhattar,R.
  TITLE     Regulation of BRCC, a holoenzyme complex containing BRCA1 and
            BRCA2, by a signalosome-like subunit and its role in DNA repair
  JOURNAL   Mol. Cell 12 (5), 1087-1099 (2003)
   PUBMED   14636569
REFERENCE   7  (bases 1 to 1776)
  AUTHORS   Ching,A.K., Li,P.S., Li,Q., Chan,B.C., Chan,J.Y., Lim,P.L.,
            Pang,J.C. and Chui,Y.L.
  TITLE     Expression of human BRE in multiple isoforms
  JOURNAL   Biochem. Biophys. Res. Commun. 288 (3), 535-545 (2001)
   PUBMED   11676476
REFERENCE   8  (bases 1 to 1776)
  AUTHORS   Miao,J., Panesar,N.S., Chan,K.T., Lai,F.M., Xia,N., Wang,Y.,
            Johnson,P.J. and Chan,J.Y.
  TITLE     Differential expression of a stress-modulating gene, BRE, in the
            adrenal gland, in adrenal neoplasia, and in abnormal adrenal
            tissues
  JOURNAL   J. Histochem. Cytochem. 49 (4), 491-500 (2001)
   PUBMED   11259452
REFERENCE   9  (bases 1 to 1776)
  AUTHORS   Gu,C., Castellino,A., Chan,J.Y. and Chao,M.V.
  TITLE     BRE: a modulator of TNF-alpha action
  JOURNAL   FASEB J. 12 (12), 1101-1108 (1998)
   PUBMED   9737713
REFERENCE   10 (bases 1 to 1776)
  AUTHORS   Li,L., Yoo,H., Becker,F.F., Ali-Osman,F. and Chan,J.Y.
  TITLE     Identification of a brain- and reproductive-organs-specific gene
            responsive to DNA damage and retinoic acid
  JOURNAL   Biochem. Biophys. Res. Commun. 206 (2), 764-774 (1995)
   PUBMED   7826398
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC021171.6, AF420605.1 and CR994399.1.
            
            Transcript Variant: This variant (6) lacks an exon and uses an
            alternate splice site in the 3' coding region, which results in a
            frameshift, compared to variant 1. The encoded isoform (4) is
            shorter and has a distinct C-terminus, compared to isoform 1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF420605.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           ERS025082, ERS025085 [ECO:0000348]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-178               AC021171.6         30058-30235
            179-1579            AF420605.1         1-1401
            1580-1776           CR994399.1         524-720
FEATURES             Location/Qualifiers
     source          1..1776
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="2"
                     /map="2p23.2"
     gene            1..1776
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /note="brain and reproductive organ-expressed (TNFRSF1A
                     modulator)"
                     /db_xref="GeneID:9577"
                     /db_xref="HGNC:1106"
                     /db_xref="MIM:610497"
     exon            1..228
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /inference="alignment:Splign:1.39.8"
     exon            229..380
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /inference="alignment:Splign:1.39.8"
     misc_feature    232..234
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /note="upstream in-frame stop codon"
     variation       240
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:202093947"
     variation       251
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:371787661"
     CDS             253..1392
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /note="isoform 4 is encoded by transcript variant 6;
                     BRCA1/BRCA2-containing complex, subunit 4; BRCA1-A complex
                     subunit BRE; BRCA1/BRCA2-containing complex subunit 45;
                     brain and reproductive organ-expressed protein"
                     /codon_start=1
                     /product="BRCA1-A complex subunit BRE isoform 4"
                     /protein_id="NP_001248769.1"
                     /db_xref="GI:387912573"
                     /db_xref="GeneID:9577"
                     /db_xref="HGNC:1106"
                     /db_xref="MIM:610497"
                     /translation="
MSPEVALNRISPMLSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPNCDRFKLHIPYAGETLKWDIIFNAQYPELPPDFIFGEDAEFLPDPSALQNLASWNPSNPECLLLVVKELVQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVDFSNIPTYLLKDVNEDPGEDVALLSVSFEDTEATQVYPKLYLSPRIEHALGGSSALHIPAFPGGGCLIDYVPQVCHLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLLLMWKDFCFLVHIDLPLFFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAKRANSRRQHLPMESSRKHQS
"
     misc_feature    253..837
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /note="Brain and reproductive organ-expressed protein
                     (BRE); Region: BRE; pfam06113"
                     /db_xref="CDD:147983"
     misc_feature    253..255
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="N-acetylmethionine; propagated from
                     UniProtKB/Swiss-Prot (Q9NXR7.2); acetylation site"
     misc_feature    256..258
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
                     (Q9NXR7.2); phosphorylation site"
     misc_feature    340..693
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (Q9NXR7.2);
                     Region: UEV-like 1"
     misc_feature    1075..1344
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="propagated from UniProtKB/Swiss-Prot (Q9NXR7.2);
                     Region: UEV-like 2"
     misc_feature    <1108..1251
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /note="Brain and reproductive organ-expressed protein
                     (BRE); Region: BRE; pfam06113"
                     /db_xref="CDD:147983"
     variation       282
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:147256639"
     variation       284
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:144572761"
     variation       289
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:374065412"
     variation       358
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:200906690"
     variation       365
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:201837586"
     variation       371
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:200380663"
     exon            381..457
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /inference="alignment:Splign:1.39.8"
     variation       415
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:145553462"
     variation       417
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:377112382"
     exon            458..552
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /inference="alignment:Splign:1.39.8"
     variation       531
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:145549560"
     variation       538
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:140802379"
     exon            553..747
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /inference="alignment:Splign:1.39.8"
     variation       600
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:191932782"
     variation       636
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:182586969"
     variation       643
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:373361156"
     variation       649
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:200578948"
     variation       650
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:138608273"
     variation       715
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:200034653"
     variation       721
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:202064486"
     variation       732..733
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace=""
                     /replace="a"
                     /db_xref="dbSNP:373964958"
     variation       732
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:201904014"
     exon            748..822
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /inference="alignment:Splign:1.39.8"
     variation       753
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:374750587"
     variation       766
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:150887846"
     variation       786
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:185398532"
     variation       787
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:149653090"
     variation       789
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:377461390"
     variation       807
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:201716241"
     exon            823..932
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /inference="alignment:Splign:1.39.8"
     variation       878
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:193920803"
     variation       896
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:201050165"
     variation       911
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:370306496"
     exon            933..1032
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /inference="alignment:Splign:1.39.8"
     variation       933
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:367605362"
     variation       973
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:370651719"
     variation       999
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:200441683"
     variation       1000
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:146767400"
     variation       1018
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:139141828"
     exon            1033..1103
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /inference="alignment:Splign:1.39.8"
     variation       1035
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:147449945"
     variation       1041
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:28997579"
     variation       1056
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:144070701"
     variation       1103
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:372205006"
     exon            1104..1186
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /inference="alignment:Splign:1.39.8"
     variation       1186
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:141089075"
     exon            1187..1340
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /inference="alignment:Splign:1.39.8"
     variation       1200
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:138374824"
     variation       1210
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:140276316"
     variation       1239
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:112441915"
     variation       1279
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:373592489"
     variation       1321
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:376668252"
     exon            1341..1764
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /inference="alignment:Splign:1.39.8"
     variation       1343
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:201259934"
     variation       1398
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:375248335"
     variation       1422
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:116114067"
     variation       1457
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:145476479"
     variation       1474
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:148041909"
     STS             1524..1680
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /standard_name="D2S2556"
                     /db_xref="UniSTS:38551"
     variation       1598
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:1802747"
     variation       1616
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:140823168"
     variation       1696
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:181212252"
     variation       1753
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace=""
                     /replace="c"
                     /db_xref="dbSNP:199930737"
     variation       1753
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:58720304"
     variation       1754
                     /gene="BRE"
                     /gene_synonym="BRCC4; BRCC45"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:55977836"
ORIGIN      
ggaactgtcaggcaccgcggggacgcctttccgagcgcccggctcggcgcggcgcgggggcgcgcacgccgcccagcttcggggccgcagagggggcggggcgggacgtccggggagtgcgcacgcatcctgcccgcggcgcgcgcgcaggtcggtgcgtctgtcgggggcgcgctcgggtacctgtaccccacgtagtcgccggttaccgatcggactaagttccagtggtgatttacaagtcaagttaaaatgtccccagaagtggccttgaaccgaatatctccaatgctctcccctttcatatctagcgtggtccggaatggaaaagtgggactggatgctacaaactgtttgaggataactgacttaaaatctggctgcacatcattgactcctgggcccaactgtgaccgatttaaactgcacataccatatgctggagagacattaaagtgggatatcattttcaatgcccaatacccagaactgcctcccgattttatctttggagaagatgctgaattcctgccagacccctcagctttgcagaatcttgcctcctggaatccttcaaatcctgaatgtctcttacttgtggtgaaggaacttgtgcaacaatatcaccaattccaatgtagccgcctccgggagagctcccgcctcatgtttgaataccagacattactggaggagccacagtatggagagaacatggaaatttatgctgggaaaaaaaacaactggactggtgaattttcagctcgtttccttttgaagctgcccgtagatttcagcaatatccccacataccttctcaaggatgtaaatgaagaccctggagaagatgtggccctcctctctgttagttttgaggacactgaagccacccaggtgtaccccaagctgtacttgtcacctcgaattgagcatgcacttggaggctcctcagctcttcatatcccagcttttccaggaggaggatgtctcattgattacgttcctcaagtatgccacctgctcaccaacaaggtgcagtacgtgattcaagggtatcacaaaagaagagagtatattgctgcttttctcagtcactttggcacaggtgtcgtggaatatgatgcagaaggctttacaaaactcactctgctgctgatgtggaaagatttttgttttcttgtacacattgacctgcctctgtttttccctcgagaccagccaactctcacatttcagtccgtttatcactttaccaacagtggacagctttactcccaggcccaaaaaaattatccgtacagccccagatgggatggaaatgaaatggccaaaagagcaaattccaggaggcagcatttgccaatggaaagctctaggaaacaccagtcttgagaggtggccagccagactgcctgtccacatgcgtgtcagcacatacagccgcttcctggaagccgcctggaatgtcttcacggcagcgttttgctcacacagcagcttttgcacgccccaggcagccccgactgctgaaatccaacttgagctggctggtggtccctggatcctagagcccttcacttcgggttactccctctttcttgcctctatttcttagttggaagaaataaactcacaaattatggtgcagtaattttccggggaaagtaaagcctcaggaatgcccacgcctttcttccaaagcctttgtctctgagacctcttaagttctaagattaaatgcccctcgctgttcttcctctgaaaaaaaaaaaaaaa
//

Annotations:

ANNOTATIONS from NCBI Entrez Gene (20130726):
            GeneID:9577 -> Molecular function: GO:0000268 [peroxisome targeting sequence binding] evidence: TAS
            GeneID:9577 -> Molecular function: GO:0005164 [tumor necrosis factor receptor binding] evidence: IDA
            GeneID:9577 -> Molecular function: GO:0005515 [protein binding] evidence: IPI
            GeneID:9577 -> Molecular function: GO:0031593 [polyubiquitin binding] evidence: IDA
            GeneID:9577 -> Biological process: GO:0006302 [double-strand break repair] evidence: IMP
            GeneID:9577 -> Biological process: GO:0006915 [apoptotic process] evidence: IEA
            GeneID:9577 -> Biological process: GO:0006974 [response to DNA damage stimulus] evidence: IEP
            GeneID:9577 -> Biological process: GO:0007165 [signal transduction] evidence: TAS
            GeneID:9577 -> Biological process: GO:0010212 [response to ionizing radiation] evidence: IMP
            GeneID:9577 -> Biological process: GO:0016568 [chromatin modification] evidence: IEA
            GeneID:9577 -> Biological process: GO:0031572 [G2 DNA damage checkpoint] evidence: IMP
            GeneID:9577 -> Biological process: GO:0045739 [positive regulation of DNA repair] evidence: IMP
            GeneID:9577 -> Cellular component: GO:0000152 [nuclear ubiquitin ligase complex] evidence: IDA
            GeneID:9577 -> Cellular component: GO:0005634 [nucleus] evidence: IDA
            GeneID:9577 -> Cellular component: GO:0005737 [cytoplasm] evidence: IDA
            GeneID:9577 -> Cellular component: GO:0070531 [BRCA1-A complex] evidence: IDA
            GeneID:9577 -> Cellular component: GO:0070552 [BRISC complex] evidence: IDA

by @meso_cacase at DBCLS
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