Home |
Help |
Advanced search
2024-04-20 03:21:28, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_001258412 2302 bp mRNA linear PRI 17-APR-2013
DEFINITION Homo sapiens solute carrier family 5 (sodium/glucose
cotransporter), member 11 (SLC5A11), transcript variant 3, mRNA.
ACCESSION NM_001258412
VERSION NM_001258412.1 GI:385862199
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2302)
AUTHORS Tsai,L.J., Hsiao,S.H., Tsai,L.M., Lin,C.Y., Tsai,J.J., Liou,D.M.
and Lan,J.L.
TITLE The sodium-dependent glucose cotransporter SLC5A11 as an autoimmune
modifier gene in SLE
JOURNAL Tissue Antigens 71 (2), 114-126 (2008)
PUBMED 18069935
REMARK GeneRIF: SLC5A11 is involved with some immune effects and interacts
with immune-related gene(s); it is consistent with its function as
an autoimmune modifier gene.
GeneRIF: Observational study of gene-disease association. (HuGE
Navigator)
REFERENCE 2 (bases 1 to 2302)
AUTHORS Coady,M.J., Wallendorff,B., Gagnon,D.G. and Lapointe,J.Y.
TITLE Identification of a novel Na+/myo-inositol cotransporter
JOURNAL J. Biol. Chem. 277 (38), 35219-35224 (2002)
PUBMED 12133831
REFERENCE 3 (bases 1 to 2302)
AUTHORS Roll,P., Massacrier,A., Pereira,S., Robaglia-Schlupp,A., Cau,P. and
Szepetowski,P.
TITLE New human sodium/glucose cotransporter gene (KST1): identification,
characterization, and mutation analysis in ICCA (infantile
convulsions and choreoathetosis) and BFIC (benign familial
infantile convulsions) families
JOURNAL Gene 285 (1-2), 141-148 (2002)
PUBMED 12039040
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
DC332171.1, AK295427.1, AY044906.1 and AA772233.1.
Summary: Cotransporters, such as SLC5A11, represent a major class
of proteins that make use of ion gradients to drive active
transport for the cellular accumulation of nutrients,
neurotransmitters, osmolytes, and ions Roll et al. (2002) [PubMed
12039040].[supplied by OMIM, Mar 2008].
Transcript Variant: This variant (3) lacks two exons in the coding
region, but maintains the reading frame, compared to variant 1. The
encoded isoform (3) is shorter than isoform 1.
##Evidence-Data-START##
Transcript exon combination :: AK295427.1 [ECO:0000332]
RNAseq introns :: mixed/partial sample support
ERS025082 [ECO:0000350]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-132 DC332171.1 1-132
133-662 AK295427.1 2-531
663-2289 AY044906.1 724-2350
2290-2302 AA772233.1 1-13 c
FEATURES Location/Qualifiers
source 1..2302
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="16"
/map="16p12.1"
gene 1..2302
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/note="solute carrier family 5 (sodium/glucose
cotransporter), member 11"
/db_xref="GeneID:115584"
/db_xref="HGNC:23091"
/db_xref="MIM:610238"
exon 1..150
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/inference="alignment:Splign:1.39.8"
variation 18
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace=""
/replace="g"
/db_xref="dbSNP:368627052"
variation 61
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:150759703"
variation 64
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:139779417"
variation 118
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:143698591"
exon 151..357
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/inference="alignment:Splign:1.39.8"
variation 178
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:58606571"
variation 199
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:147251956"
variation 265
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:140745402"
variation 267
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:113554867"
variation 275
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="g"
/db_xref="dbSNP:370109994"
variation 289
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="c"
/db_xref="dbSNP:116892219"
misc_feature 307..309
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/note="upstream in-frame stop codon"
variation 333
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:145781272"
exon 358..516
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/inference="alignment:Splign:1.39.8"
variation 372
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:376893340"
CDS 382..2199
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/note="isoform 3 is encoded by transcript variant 3;
putative sodium-coupled cotransporter RKST1; homolog of
rabbit KST1; sodium/myo-inositol cotransporter 2;
sodium/glucose cotransporter KST1; sodium-dependent
glucose cotransporter; Na(+)/myo-inositol cotransporter 2;
sodium/myo-inositol transporter 2"
/codon_start=1
/product="sodium/myo-inositol cotransporter 2 isoform 3"
/protein_id="NP_001245341.1"
/db_xref="GI:385862200"
/db_xref="CCDS:CCDS58438.1"
/db_xref="GeneID:115584"
/db_xref="HGNC:23091"
/db_xref="MIM:610238"
/translation="
MESGTSSPQPPQLDPLDAFPQKGLEPGDIAVLVLYFLFVLAVGLWSTVKTKRDTVKGYFLAGGDMVWWPGLFSVLMLAWIFLPIYIAGQVDMYAGAIFIQQSLHLDLYLAIVGLLAITAVYTVAGGLAAVIYTDALQTLIMLIGALTLMGYSFAAVGGMEGLKEKYFLALASNRSENSSCGLPREDAFHIFRDPLTSDLPWPGVLFGMSIPSLWYWCTDQVIVQRTLAAKNLSHAKGGALMAAYLKVLPLFIMVFPGMVSRILFPDQVACADPEICQKICSNPSGCSDIAYPKLVLELLPTGLRGLMMAVMVAALMSSLTSIFNSASTIFTMDLWNHLRPRASEKELMIVGRVFVLLLVLVSILWIPVVQASQGGQLFIYIQSISSYLQPPVAVVFIMGCFWKRTNEKGAFWGLISGLLLGLVRLVLDFIYVQPRCDQPDERPVLVKSIHYLYFSMILSTVTLITVSTVSWFTEPPSKEMVSHLTWFTRHDPVVQKEQAPPAAPLSLTLSQNGMPEASSSSSVQFEMVQENTSKTHSCDMTPKQSKVVKAILWLCGIQEKGKEELPARAEAIIVSLEENPLVKTLLDVNLIFCVSCAIFIWGYFA
"
misc_feature 508..2196
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/note="Solute carrier families 5 and 6-like; solute
binding domain; Region: SLC5-6-like_sbd; cl00456"
/db_xref="CDD:212220"
misc_feature order(1321..1323,1330..1335)
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/note="Na binding site [ion binding]; other site"
/db_xref="CDD:212031"
variation 404
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="g"
/db_xref="dbSNP:200570182"
variation 435
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:34080398"
variation 442
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:140932818"
variation 463
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="g"
/db_xref="dbSNP:376121690"
variation 470
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="c"
/db_xref="dbSNP:372492277"
variation 507
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="g"
/replace="t"
/db_xref="dbSNP:199905164"
variation 513
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:144778631"
exon 517..588
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/inference="alignment:Splign:1.39.8"
variation 520
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="g"
/replace="t"
/db_xref="dbSNP:36048966"
variation 572
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="c"
/db_xref="dbSNP:112227478"
variation 585
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:147549055"
exon 589..648
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/inference="alignment:Splign:1.39.8"
variation 609
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:199550725"
exon 649..754
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/inference="alignment:Splign:1.39.8"
variation 663
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:8052587"
variation 716
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:11074656"
variation 742
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:146802677"
variation 746
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:201071374"
variation 747
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:9932619"
exon 755..835
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/inference="alignment:Splign:1.39.8"
variation 757
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:368802168"
variation 780
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="g"
/db_xref="dbSNP:74015770"
variation 794
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:138777129"
variation 798
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201007741"
variation 821
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:373030092"
variation 825
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:375189875"
variation 834
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:376938001"
exon 836..1041
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/inference="alignment:Splign:1.39.8"
variation 840
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:274081"
variation 841
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="g"
/db_xref="dbSNP:61744722"
variation 845
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:200088797"
variation 885
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143588834"
variation 900
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="c"
/db_xref="dbSNP:200273165"
variation 901
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:147985837"
variation 917
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:371829346"
variation 931
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:374864110"
variation 942
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:111658035"
variation 943
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:147167831"
variation 945
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="g"
/db_xref="dbSNP:35993597"
variation 962
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:143257558"
variation 963
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="g"
/replace="t"
/db_xref="dbSNP:201711094"
variation 980
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:201564571"
variation 981
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:369610204"
variation 983
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:373012382"
variation 1008
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:200548569"
variation 1035
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:376534051"
exon 1042..1177
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/inference="alignment:Splign:1.39.8"
variation 1042
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:35825308"
variation 1047
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="g"
/replace="t"
/db_xref="dbSNP:150065146"
variation 1054
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:371082919"
variation 1055
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:375643511"
variation 1056
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:144367553"
variation 1082
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:148717591"
variation 1124
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:143584843"
variation 1146
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:368600686"
variation 1161
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:372688531"
variation 1164
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:146829094"
variation 1176
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:376647196"
exon 1178..1285
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/inference="alignment:Splign:1.39.8"
variation 1200
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:147495923"
variation 1228
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="g"
/db_xref="dbSNP:143409067"
variation 1232
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="c"
/db_xref="dbSNP:200594115"
variation 1242
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:184195172"
variation 1248
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:17772929"
variation 1261
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:199631125"
variation 1263
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:369534820"
variation 1264
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:372298696"
variation 1272
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="c"
/db_xref="dbSNP:377371301"
exon 1286..1436
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/inference="alignment:Splign:1.39.8"
variation 1291
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:140262201"
variation 1292
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:150379174"
variation 1328
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="g"
/replace="t"
/db_xref="dbSNP:201298732"
variation 1329
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:142930904"
variation 1335
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:377751008"
variation 1375
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:193201573"
variation 1396
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:151082145"
variation 1397
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:371000727"
exon 1437..1605
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/inference="alignment:Splign:1.39.8"
variation 1488
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="g"
/db_xref="dbSNP:367762155"
variation 1526
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:17854935"
variation 1536
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:145761147"
variation 1559..1560
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace=""
/replace="gg"
/db_xref="dbSNP:143692477"
variation 1562..1563
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace=""
/replace="ggg"
/db_xref="dbSNP:376983040"
variation 1562
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="g"
/replace="t"
/db_xref="dbSNP:76309826"
variation 1595
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:374032922"
variation 1598
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:367995045"
exon 1606..1821
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/inference="alignment:Splign:1.39.8"
variation 1628
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:372842024"
variation 1629
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:377195459"
variation 1635
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="g"
/replace="t"
/db_xref="dbSNP:368806962"
variation 1663
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:138599553"
variation 1674
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:142762087"
variation 1675
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:373043652"
variation 1685
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:373228519"
variation 1689
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:148842039"
variation 1690
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:377315381"
variation 1706
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:370702626"
variation 1709
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:113001577"
variation 1719
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="g"
/db_xref="dbSNP:200082381"
variation 1760
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:113296816"
variation 1766
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:370263287"
variation 1772
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:202190705"
variation 1777
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="g"
/db_xref="dbSNP:150704603"
variation 1785
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:200934183"
variation 1786
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:35038575"
variation 1800
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:200970435"
variation 1807
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:376258271"
exon 1822..1993
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/inference="alignment:Splign:1.39.8"
variation 1837
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="g"
/replace="t"
/db_xref="dbSNP:371993218"
variation 1847
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:141986069"
variation 1851
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:146295406"
variation 1858
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:139484914"
variation 1898
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:116112035"
variation 1907
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="g"
/replace="t"
/db_xref="dbSNP:145226478"
variation 1924
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:148456649"
variation 1931..1932
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace=""
/replace="cagcag"
/db_xref="dbSNP:374299311"
variation 1932..1934
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace=""
/replace="cag"
/db_xref="dbSNP:140499762"
variation 1956
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:376857207"
variation 1957
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:142615879"
variation 1976
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:199973132"
variation 1977
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:151021366"
exon 1994..2294
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/inference="alignment:Splign:1.39.8"
variation 2022
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="g"
/db_xref="dbSNP:200475829"
variation 2054
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:142247783"
variation 2078
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:145800390"
variation 2088
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:373626846"
variation 2142
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:147778032"
variation 2148
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:377719942"
variation 2160
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:141077892"
variation 2161
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:199739042"
variation 2163
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:34739151"
variation 2168
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="g"
/db_xref="dbSNP:146878626"
variation 2170
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="a"
/replace="g"
/db_xref="dbSNP:368113331"
variation 2172
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="t"
/db_xref="dbSNP:137978405"
variation 2245
/gene="SLC5A11"
/gene_synonym="KST1; RKST1; SGLT6; SMIT2"
/replace="c"
/replace="g"
/db_xref="dbSNP:371668463"
ORIGIN
actgcggtgagggctgtggctggacgtccctcctggcactttgcctctgtcccctccatccgccgccagcatttttcctcccctccccttcctccagctcgtcccaagcctgcctgtccccagcgtggaggcgggacagtggaagactggctgaggctggagtttggagtttgacccgcttggaggctctctcagcagcgggcatataggaggaagggtcactgctgtctccggaagctcttggctgcaaagagagaggatcccgggtatctccctccttacaaccaccgccacctcctagtgccttagaagccactgacagcccccagggcaggtgagccctgcatctggaataaggatccagaggtctcgttcaggaccatggagagcggcaccagcagccctcagcctccacagttagatcccctggatgcgtttccccagaagggcttggagcctggggacatcgcggtgctagttctgtacttcctctttgtcctggctgttggactatggtccacagtgaagaccaaaagagacacagtgaaaggctacttcctggctggaggggacatggtgtggtggccaggcttgttttctgtgctgatgttggcctggatcttcctacccatctacattgctggtcaggtagacatgtatgcaggtgccatcttcatccagcagtctttgcacctggatctgtacctggccatagttgggctactggccatcactgctgtatacacggttgctggtggcctggctgctgtgatctacacggatgccctgcagacgctgatcatgcttataggagcgctcaccttgatgggctacagttttgccgcggttggtgggatggaaggactgaaggagaagtacttcttggccctggctagcaaccggagtgagaacagcagctgcgggctgccccgggaagatgccttccatattttccgagatccgctgacatctgatctcccgtggccgggggtcctatttggaatgtccatcccatccctctggtactggtgcacggatcaggtgattgtccagcggactctggctgccaagaacctgtcccatgccaaaggaggtgctctgatggctgcatacctgaaggtgctgcccctcttcataatggtgttccctgggatggtcagccgcatcctcttcccagatcaagtggcctgtgcagatccagagatctgccagaagatctgcagcaacccctcaggctgttcggacatcgcgtatcccaaactcgtgctggaactcctgcccacagggctccgtgggctgatgatggctgtgatggtggcggctctcatgtcctccctcacctccatctttaacagtgccagcaccatcttcaccatggacctctggaatcacctccggcctcgggcatctgagaaggagctcatgattgtgggcagggtgtttgtgctgctgctggtcctggtctccatcctctggatccctgtggtccaggccagccagggcggccagctcttcatctatatccagtccatcagctcctacctgcagccgcctgtggcggtggtcttcatcatgggatgtttctggaagaggaccaatgaaaagggtgccttctggggcctgatctcgggcctgctcctgggcttggttaggctggtcctggactttatttacgtgcagcctcgatgcgaccagccagatgagcgcccggtcctggtgaagagcattcactacctctacttctccatgatcctgtccacggtcaccctcatcactgtctccaccgtgagctggttcacagagccaccctccaaggagatggtcagccacctgacctggtttactcgtcacgaccccgtggtccagaaggaacaagcaccaccagcagctcccttgtctcttaccctctctcagaacgggatgccagaggccagcagcagcagcagcgtccagttcgagatggttcaagaaaacacgtctaaaacccacagctgtgacatgaccccaaagcagtccaaagtggtgaaggccatcctgtggctctgtggaatacaggagaagggcaaggaagagctcccggccagagcagaagccatcatagtttccctggaagaaaaccccttggtgaagaccctcctggacgtcaacctcattttctgcgtgagctgcgccatctttatctggggctattttgcttagtgtggggtgaacccaggggtccaaactctgtttctcttcagtgctccatttttttaatgaaagaaaaaataataaagcttttgtttaccacaaggaaaaaaaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:115584 -> Molecular function: GO:0015293 [symporter activity] evidence: IEA
GeneID:115584 -> Biological process: GO:0006814 [sodium ion transport] evidence: IEA
GeneID:115584 -> Biological process: GO:0006915 [apoptotic process] evidence: IEA
GeneID:115584 -> Biological process: GO:0008643 [carbohydrate transport] evidence: IEA
GeneID:115584 -> Biological process: GO:0055085 [transmembrane transport] evidence: TAS
GeneID:115584 -> Cellular component: GO:0005886 [plasma membrane] evidence: TAS
GeneID:115584 -> Cellular component: GO:0016021 [integral to membrane] evidence: IEA
by
@meso_cacase at
DBCLS
This page is licensed under a Creative Commons Attribution 2.1 Japan License.