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2024-04-26 14:52:26, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_001256421 2640 bp mRNA linear PRI 16-JUN-2013
DEFINITION Homo sapiens 1-acylglycerol-3-phosphate O-acyltransferase 9
(AGPAT9), transcript variant 2, mRNA.
ACCESSION NM_001256421
VERSION NM_001256421.1 GI:374088030
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2640)
AUTHORS Comuzzie,A.G., Cole,S.A., Laston,S.L., Voruganti,V.S., Haack,K.,
Gibbs,R.A. and Butte,N.F.
TITLE Novel genetic loci identified for the pathophysiology of childhood
obesity in the Hispanic population
JOURNAL PLoS ONE 7 (12), E51954 (2012)
PUBMED 23251661
REFERENCE 2 (bases 1 to 2640)
AUTHORS Shan,D., Li,J.L., Wu,L., Li,D., Hurov,J., Tobin,J.F., Gimeno,R.E.
and Cao,J.
TITLE GPAT3 and GPAT4 are regulated by insulin-stimulated phosphorylation
and play distinct roles in adipogenesis
JOURNAL J. Lipid Res. 51 (7), 1971-1981 (2010)
PUBMED 20181984
REMARK GeneRIF: Results reveal a link between the lipogenic effects of
insulin and microsomal GPAT3 and GPAT4, implying their importance
in glycerolipid biosynthesis.
REFERENCE 3 (bases 1 to 2640)
AUTHORS Cao,J., Li,J.L., Li,D., Tobin,J.F. and Gimeno,R.E.
TITLE Molecular identification of microsomal
acyl-CoA:glycerol-3-phosphate acyltransferase, a key enzyme in de
novo triacylglycerol synthesis
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 103 (52), 19695-19700 (2006)
PUBMED 17170135
REFERENCE 4 (bases 1 to 2640)
AUTHORS Tang,W., Yuan,J., Chen,X., Gu,X., Luo,K., Li,J., Wan,B., Wang,Y.
and Yu,L.
TITLE Identification of a novel human lysophosphatidic acid
acyltransferase, LPAAT-theta, which activates mTOR pathway
JOURNAL J. Biochem. Mol. Biol. 39 (5), 626-635 (2006)
PUBMED 17002884
REMARK GeneRIF: LPAAT-theta gene consisted of 12 exons and 11 introns, and
mapped to chromosome 4q21.23, was ubiquitously expressed in 18
human tissues and overexpression of LPAAT-theta can induce
mTOR-dependent p70S6K and 4EBP1 phosphorylation in HEK293T cells.
REFERENCE 5 (bases 1 to 2640)
AUTHORS Oh,J.H., Yang,J.O., Hahn,Y., Kim,M.R., Byun,S.S., Jeon,Y.J.,
Kim,J.M., Song,K.S., Noh,S.M., Kim,S., Yoo,H.S., Kim,Y.S. and
Kim,N.S.
TITLE Transcriptome analysis of human gastric cancer
JOURNAL Mamm. Genome 16 (12), 942-954 (2005)
PUBMED 16341674
REFERENCE 6 (bases 1 to 2640)
AUTHORS Yamada,S., Ohira,M., Horie,H., Ando,K., Takayasu,H., Suzuki,Y.,
Sugano,S., Hirata,T., Goto,T., Matsunaga,T., Hiyama,E., Hayashi,Y.,
Ando,H., Suita,S., Kaneko,M., Sasaki,F., Hashizume,K., Ohnuma,N.
and Nakagawara,A.
TITLE Expression profiling and differential screening between
hepatoblastomas and the corresponding normal livers: identification
of high expression of the PLK1 oncogene as a poor-prognostic
indicator of hepatoblastomas
JOURNAL Oncogene 23 (35), 5901-5911 (2004)
PUBMED 15221005
REFERENCE 7 (bases 1 to 2640)
AUTHORS Zhang,J., Meng,Y., Du,Z., Chen,Z., Ling,X., Xu,Y. and Lu,Y.
TITLE [Identification of novel metastasis associated genes MAG-1 and
MAG-2]
JOURNAL Zhongguo Fei Ai Za Zhi 6 (6), 460-463 (2003)
PUBMED 21310131
REFERENCE 8 (bases 1 to 2640)
AUTHORS Clark,H.F., Gurney,A.L., Abaya,E., Baker,K., Baldwin,D., Brush,J.,
Chen,J., Chow,B., Chui,C., Crowley,C., Currell,B., Deuel,B.,
Dowd,P., Eaton,D., Foster,J., Grimaldi,C., Gu,Q., Hass,P.E.,
Heldens,S., Huang,A., Kim,H.S., Klimowski,L., Jin,Y., Johnson,S.,
Lee,J., Lewis,L., Liao,D., Mark,M., Robbie,E., Sanchez,C.,
Schoenfeld,J., Seshagiri,S., Simmons,L., Singh,J., Smith,V.,
Stinson,J., Vagts,A., Vandlen,R., Watanabe,C., Wieand,D., Woods,K.,
Xie,M.H., Yansura,D., Yi,S., Yu,G., Yuan,J., Zhang,M., Zhang,Z.,
Goddard,A., Wood,W.I., Godowski,P. and Gray,A.
TITLE The secreted protein discovery initiative (SPDI), a large-scale
effort to identify novel human secreted and transmembrane proteins:
a bioinformatics assessment
JOURNAL Genome Res. 13 (10), 2265-2270 (2003)
PUBMED 12975309
REMARK Erratum:[Genome Res. 2003 Dec;13(12):2759]
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
AC096768.3, AK055749.1, AC021192.7 and BM841009.1.
Summary: This gene encodes a member of the lysophosphatidic acid
acyltransferase protein family. The encoded protein is an enzyme
which catalyzes the conversion of glycerol-3-phosphate to
lysophosphatidic acid in the synthesis of triacylglycerol. Multiple
alternatively spliced variants, encoding the same protein, have
been identified. [provided by RefSeq, Jan 2012].
Transcript Variant: This variant (2) differs in the 5' UTR compared
to variant 1. Variants 1, 2 and 3 encode the same protein.
Sequence Note: This RefSeq record was created from transcript and
genomic sequence data to make the sequence consistent with the
reference genome assembly. The genomic coordinates used for the
transcript record were based on transcript alignments.
##Evidence-Data-START##
Transcript exon combination :: AK055749.1, AK223543.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
ERS025083, ERS025084 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-1 AC096768.3 153320-153320
2-866 AK055749.1 1-865
867-867 AC021192.7 28985-28985
868-2304 AK055749.1 867-2303
2305-2630 AC021192.7 44331-44656
2631-2640 BM841009.1 295-304
FEATURES Location/Qualifiers
source 1..2640
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="4"
/map="4q21.23"
gene 1..2640
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/note="1-acylglycerol-3-phosphate O-acyltransferase 9"
/db_xref="GeneID:84803"
/db_xref="HGNC:28157"
/db_xref="MIM:610958"
exon 1..100
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/inference="alignment:Splign:1.39.8"
variation 25
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="g"
/db_xref="dbSNP:113506084"
variation 27
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="g"
/db_xref="dbSNP:116785791"
exon 101..360
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/inference="alignment:Splign:1.39.8"
variation 169
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:371436028"
variation 181
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:376621072"
variation 194
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:368843173"
CDS 220..1524
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/EC_number="2.3.1.15"
/note="1-acylglycerol-3-phosphate O-acyltransferase 8;
lysophosphatidic acid acyltransferase, theta;
lysophosphatidic acid acyltransferase theta; MAG-1;
GPAT-3; hGPAT3; 1-AGPAT 9; 1-AGP acyltransferase 9; lung
cancer metastasis-associated protein 1;
acyl-CoA:glycerol-3-phosphate acyltransferase 3;
endoplasmic reticulum associated GPAT"
/codon_start=1
/product="glycerol-3-phosphate acyltransferase 3"
/protein_id="NP_001243350.1"
/db_xref="GI:374088031"
/db_xref="CCDS:CCDS3606.1"
/db_xref="GeneID:84803"
/db_xref="HGNC:28157"
/db_xref="MIM:610958"
/translation="
MEGAELAGKILSTWLTLVLGFILLPSVFGVSLGISEIYMKILVKTLEWATIRIEKGTPKESILKNSASVGIIQRDESPMEKGLSGLRGRDFELSDVFYFSKKGLEAIVEDEVTQRFSSEELVSWNLLTRTNVNFQYISLRLTMVWVLGVIVRYCVLLPLRVTLAFIGISLLVIGTTLVGQLPDSSLKNWLSELVHLTCCRICVRALSGTIHYHNKQYRPQKGGICVANHTSPIDVLILTTDGCYAMVGQVHGGLMGIIQRAMVKACPHVWFERSEMKDRHLVTKRLKEHIADKKKLPILIFPEGTCINNTSVMMFKKGSFEIGGTIHPVAIKYNPQFGDAFWNSSKYNMVSYLLRMMTSWAIVCDVWYMPPMTREEGEDAVQFANRVKSAIAIQGGLTELPWDGGLKRAKVKDIFKEEQQKNYSKMIVGNGSLS
"
misc_feature 259..321
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q53EU6.2);
transmembrane region"
misc_feature 421..423
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
(Q53EU6.2); phosphorylation site"
misc_feature 448..450
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
(Q53EU6.2); phosphorylation site"
misc_feature 628..690
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q53EU6.2);
transmembrane region"
misc_feature 700..762
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q53EU6.2);
transmembrane region"
misc_feature 814..1443
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/note="Lysophospholipid Acyltransferases (LPLATs) of
Glycerophospholipid Biosynthesis: LPCAT1-like; Region:
LPLAT_LPCAT1-like; cd07991"
/db_xref="CDD:153253"
misc_feature order(904..906,913..915,919..921,961..972,1129..1137)
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/note="putative acyl-acceptor binding pocket; other site"
/db_xref="CDD:153253"
misc_feature 904..921
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q53EU6.2);
Region: HXXXXD motif"
variation 228
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:375247636"
variation 255
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:369170585"
variation 317
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:372747571"
variation 347
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:150911365"
exon 361..427
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/inference="alignment:Splign:1.39.8"
variation 362
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:377491917"
variation 382
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:139387626"
variation 401
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="c"
/db_xref="dbSNP:201126462"
variation 403
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:186766919"
exon 428..698
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/inference="alignment:Splign:1.39.8"
variation 441
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:368075833"
variation 449
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:199578411"
variation 458
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:186811381"
variation 459
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:370396366"
variation 478
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:149617166"
variation 498
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:147296745"
variation 525
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="g"
/replace="t"
/db_xref="dbSNP:368798800"
variation 544
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:147061563"
variation 594
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="t"
/db_xref="dbSNP:140867333"
variation 605
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:144700134"
variation 626
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="t"
/db_xref="dbSNP:201723846"
variation 657
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:35757547"
variation 694
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:142766119"
exon 699..773
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/inference="alignment:Splign:1.39.8"
variation 739
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:151010160"
variation 750
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="g"
/replace="t"
/db_xref="dbSNP:140860018"
variation 757
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:144818715"
variation 760
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:369427603"
variation 769
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="t"
/db_xref="dbSNP:377164617"
variation 772
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="t"
/db_xref="dbSNP:146724501"
exon 774..863
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/inference="alignment:Splign:1.39.8"
variation 778
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:140308062"
variation 817
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:371912508"
variation 836
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:112373731"
variation 854
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:373148097"
exon 864..957
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/inference="alignment:Splign:1.39.8"
variation 887
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:376674319"
variation 925
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:202176842"
variation 938
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:368476697"
exon 958..1073
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/inference="alignment:Splign:1.39.8"
variation 963
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="g"
/db_xref="dbSNP:9995771"
variation 976
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:371169326"
variation 981
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:149459187"
variation 1036
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:367948973"
variation 1045
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="t"
/db_xref="dbSNP:181900378"
variation 1059
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:143005739"
exon 1074..1129
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/inference="alignment:Splign:1.39.8"
variation 1099
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="c"
/db_xref="dbSNP:375335065"
variation 1103
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:367596705"
variation 1129
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="g"
/db_xref="dbSNP:148178024"
exon 1130..1215
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/inference="alignment:Splign:1.39.8"
variation 1142
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:375627398"
variation 1159
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="t"
/db_xref="dbSNP:369595235"
variation 1170
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:142007951"
variation 1171
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="g"
/replace="t"
/db_xref="dbSNP:372729979"
variation 1182
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:374964396"
variation 1187
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:148996353"
variation 1204
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="g"
/db_xref="dbSNP:368802958"
variation 1214
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:147306935"
exon 1216..1344
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/inference="alignment:Splign:1.39.8"
variation 1221
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:139226112"
variation 1238
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="g"
/db_xref="dbSNP:143821455"
variation 1279
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:370008160"
variation 1282
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:143173203"
variation 1314
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:373583197"
variation 1344
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:377626285"
exon 1345..1424
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/inference="alignment:Splign:1.39.8"
variation 1362
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:147489062"
variation 1376
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:62303973"
variation 1385
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:812990"
variation 1393
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="g"
/db_xref="dbSNP:149985138"
variation 1394
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="g"
/db_xref="dbSNP:377562648"
exon 1425..2632
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/inference="alignment:Splign:1.39.8"
variation 1433
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:144227410"
variation 1478
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="c"
/db_xref="dbSNP:199560928"
variation 1506
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:148702578"
variation 1520
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="g"
/replace="t"
/db_xref="dbSNP:185019136"
variation 1525
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:369321022"
variation 1530
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:201805242"
variation 1578
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace=""
/replace="t"
/db_xref="dbSNP:35602893"
variation 1667
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:189239336"
variation 1703
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="t"
/db_xref="dbSNP:368910027"
variation 1711
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:114972171"
variation 1732
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="g"
/db_xref="dbSNP:181275321"
variation 1801
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="t"
/db_xref="dbSNP:185813917"
variation 1879
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1521531"
variation 1892
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="g"
/replace="t"
/db_xref="dbSNP:373076793"
variation 2013
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:188227794"
variation 2081
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:180738635"
variation 2105
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:186096666"
variation 2136
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="g"
/replace="t"
/db_xref="dbSNP:375600089"
variation 2140
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1521532"
variation 2177
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="g"
/db_xref="dbSNP:1052473"
variation 2247
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="c"
/db_xref="dbSNP:191821273"
variation 2255..2256
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace=""
/replace="g"
/db_xref="dbSNP:35015119"
variation 2304..2305
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace=""
/replace="a"
/replace="aa"
/db_xref="dbSNP:56872564"
variation 2304
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="t"
/db_xref="dbSNP:370506223"
variation 2316
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace=""
/replace="a"
/db_xref="dbSNP:60946170"
variation 2371
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="c"
/replace="t"
/db_xref="dbSNP:3822008"
STS 2388..2515
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/standard_name="RH92406"
/db_xref="UniSTS:91716"
variation 2464
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="c"
/db_xref="dbSNP:114885421"
variation 2477
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace=""
/replace="g"
/db_xref="dbSNP:34876739"
variation 2498
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="a"
/replace="c"
/db_xref="dbSNP:139694427"
variation 2601
/gene="AGPAT9"
/gene_synonym="AGPAT8; GPAT3; HMFN0839; LPAAT-theta; MAG1"
/replace="g"
/replace="t"
/db_xref="dbSNP:182556982"
ORIGIN
cagcttccagcacagcccgcggcccggtgccagctccgccggcgaccggtgtgccaaagtgcggtgctcccgcagggaacctggctcggggagggcctccaggtgagtgccgggctcggcgctctgctcctggagctcccgcgggactgcctggggacagggactgctgtggcgctcggccctccactgcggacctctcctgagtgggtgcgccgagtcatggagggcgcagagctggccgggaagatcctttccacctggctgacgctggttctcggcttcatccttttaccttcggtcttcggagtgtctctgggcatctccgagatctacatgaagatcctagtgaaaactttagagtgggccacaatacgaattgaaaaaggaaccccaaaggagtcgattcttaaaaactctgcttctgttggtattatccaaagagatgagtcacccatggaaaaagggctctctggtctacgaggaagggactttgagctgtctgacgtgttttatttctccaagaagggattggaagccattgtagaagatgaagtgacccagaggttttcctcagaggagctagtgtcatggaatctcctcacaagaaccaatgtaaatttccagtacatcagtctgcggctcactatggtgtgggtgctgggcgtcatagtgcgctattgtgtcctactgcctctgagggttaccttggctttcattgggatcagtttgctggttataggaactacactggttgggcagctgccagacagcagcctcaaaaactggctgagtgaactggtccatctgacttgctgccggatctgtgtgcgagccctctctggtaccattcattatcataacaagcagtacagaccccagaagggaggcatttgtgttgccaaccatacttcccccattgatgttttaatcttgacaacggatggatgttatgctatggttggccaggttcatggcggcttgatgggaattattcagagagctatggtcaaggcttgtcctcatgtctggtttgaacgctcagaaatgaaggatcgacacctggttactaagagactaaaagaacatattgctgataagaagaaactacccatactaatttttcctgaaggaacttgcatcaacaatacttcagtcatgatgtttaaaaaggggagctttgaaattggaggaaccatacatccagttgcaattaagtataaccctcagttcggtgatgcattttggaacagtagtaaatacaacatggtgagctacctgcttcgaatgatgaccagctgggccatcgtctgtgacgtgtggtacatgccccccatgaccagagaggaaggagaagatgcagtccagtttgctaacagggttaagtctgctattgctatacaaggaggcctgactgaacttccctgggatggaggactaaagagagcaaaggtgaaggacatctttaaggaagagcagcagaaaaattacagcaagatgattgtgggcaatggatctctcagctaagaggacggatgacagcctttagatctagaactagcccttagaaatggaatggctttttttgttttgttttgttttattgttttgtttttattattgttaatcttttctacagaatgattgtctctacctctttatgccagaggcagaacctacaggtgccctttttggcttttgttgttgttgtaacattagccccatggattgtaaggtggtttactgagttaaaacagattctgcttttgtaaaatgatggcatcactgtggactgaatgaaatatttgtatagaaaaaagtgcttgaaaagtgtgtttggaactcatcgatagggtaattctccaaaaatgcccaaactctttttctgtaattagccttgccactttcttcagtcacttaaatggtgagattacacatcagtgcaagatgaccattatggttatggtctactgcaaggttgaaaggaaaaatggaggattgtatttaggaaaagggacaactttgtggccacctgctctgaaagtcaaaaggaaatgtaaattagtgtcattagtgtgttggaagagaaatactattcagtaagcttcgccaaagaaaagtgagtcaaagttaatgtgtgtgcgcatttatatgtaggcagctcgtagaccacattttaaccagcaactggtaacaaagagcttagttttccttgtttgaatgctgtagatctgtacctagtacccctcccatctactgatttgtttgtttttgtaaccaaacacattttcagatagaaggagccttaaaaaaaaaaaatcacattgagtaacttcagtatgaatgaatgagagtgtgtggagctacccctcaccctccacccctttgtgctttttattcccgaattttcccagtctcttaaacagaaaaatgactgatataattatcttttggaaactgagccttaattttttttagagggggaaataagttttccccaactcacacagcataagcaatgtttgacagcaatataatgccgttgtaaactactgagagtattgtatctgttctggtaaccatgtacagaatgtgaaactgtcttatgaatataaataaattctatatttctaaaaaaaaaaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:84803 -> Molecular function: GO:0004366 [glycerol-3-phosphate O-acyltransferase activity] evidence: IDA
GeneID:84803 -> Biological process: GO:0006644 [phospholipid metabolic process] evidence: TAS
GeneID:84803 -> Biological process: GO:0006654 [phosphatidic acid biosynthetic process] evidence: TAS
GeneID:84803 -> Biological process: GO:0016024 [CDP-diacylglycerol biosynthetic process] evidence: IEA
GeneID:84803 -> Biological process: GO:0019432 [triglyceride biosynthetic process] evidence: IDA
GeneID:84803 -> Biological process: GO:0019432 [triglyceride biosynthetic process] evidence: IEA
GeneID:84803 -> Biological process: GO:0019432 [triglyceride biosynthetic process] evidence: TAS
GeneID:84803 -> Biological process: GO:0032006 [regulation of TOR signaling cascade] evidence: IDA
GeneID:84803 -> Biological process: GO:0044255 [cellular lipid metabolic process] evidence: TAS
GeneID:84803 -> Biological process: GO:0044281 [small molecule metabolic process] evidence: TAS
GeneID:84803 -> Biological process: GO:0046474 [glycerophospholipid biosynthetic process] evidence: TAS
GeneID:84803 -> Cellular component: GO:0005783 [endoplasmic reticulum] evidence: IDA
GeneID:84803 -> Cellular component: GO:0005789 [endoplasmic reticulum membrane] evidence: IDA
GeneID:84803 -> Cellular component: GO:0005789 [endoplasmic reticulum membrane] evidence: TAS
GeneID:84803 -> Cellular component: GO:0016021 [integral to membrane] evidence: IEA
ANNOTATIONS from NCBI Entrez Gene (20130726):
NP_001243350 -> EC 2.3.1.15
by
@meso_cacase at
DBCLS
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