Home |
Help |
Advanced search
2024-04-19 07:42:14, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_001242785 6112 bp mRNA linear PRI 20-APR-2013
DEFINITION Homo sapiens holocarboxylase synthetase
(biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase)
(HLCS), transcript variant 2, mRNA.
ACCESSION NM_001242785
VERSION NM_001242785.1 GI:338753399
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6112)
AUTHORS Esaki,S., Malkaram,S.A. and Zempleni,J.
TITLE Effects of single-nucleotide polymorphisms in the human
holocarboxylase synthetase gene on enzyme catalysis
JOURNAL Eur. J. Hum. Genet. 20 (4), 428-433 (2012)
PUBMED 22027809
REMARK GeneRIF: individuals with HLCS SNPs may benefit from supplemental
biotin, yet to different extents depending on the genotype
REFERENCE 2 (bases 1 to 6112)
AUTHORS Bao,B., Wijeratne,S.S., Rodriguez-Melendez,R. and Zempleni,J.
TITLE Human holocarboxylase synthetase with a start site at methionine-58
is the predominant nuclear variant of this protein and has
catalytic activity
JOURNAL Biochem. Biophys. Res. Commun. 412 (1), 115-120 (2011)
PUBMED 21802411
REMARK GeneRIF: HLCS methionine-58 is a functional translation start site
in human cells.
REFERENCE 3 (bases 1 to 6112)
AUTHORS Bao,B., Pestinger,V., Hassan,Y.I., Borgstahl,G.E., Kolar,C. and
Zempleni,J.
TITLE Holocarboxylase synthetase is a chromatin protein and interacts
directly with histone H3 to mediate biotinylation of K9 and K18
JOURNAL J. Nutr. Biochem. 22 (5), 470-475 (2011)
PUBMED 20688500
REMARK GeneRIF: Holocarboxylase synthetase interacts directly with histone
H3, causing biotinylation of lysine K9 and K18.
REFERENCE 4 (bases 1 to 6112)
AUTHORS Bao,B., Rodriguez-Melendez,R., Wijeratne,S.S. and Zempleni,J.
TITLE Biotin regulates the expression of holocarboxylase synthetase in
the miR-539 pathway in HEK-293 cells
JOURNAL J. Nutr. 140 (9), 1546-1551 (2010)
PUBMED 20592104
REMARK GeneRIF: The results of this study suggest that miR-539 is among
the factors sensing biotin and regulating holocarboxylase
synthetase expression.
REFERENCE 5 (bases 1 to 6112)
AUTHORS Bailey,L.M., Wallace,J.C. and Polyak,S.W.
TITLE Holocarboxylase synthetase: correlation of protein localisation
with biological function
JOURNAL Arch. Biochem. Biophys. 496 (1), 45-52 (2010)
PUBMED 20153287
REMARK GeneRIF: the localisation of HCS and its isoforms
REFERENCE 6 (bases 1 to 6112)
AUTHORS Aoki,Y., Suzuki,Y., Sakamoto,O., Li,X., Takahashi,K., Ohtake,A.,
Sakuta,R., Ohura,T., Miyabayashi,S. and Narisawa,K.
TITLE Molecular analysis of holocarboxylase synthetase deficiency: a
missense mutation and a single base deletion are predominant in
Japanese patients
JOURNAL Biochim. Biophys. Acta 1272 (3), 168-174 (1995)
PUBMED 8541348
REFERENCE 7 (bases 1 to 6112)
AUTHORS Leon-Del-Rio,A., Leclerc,D., Akerman,B., Wakamatsu,N. and
Gravel,R.A.
TITLE Isolation of a cDNA encoding human holocarboxylase synthetase by
functional complementation of a biotin auxotroph of Escherichia
coli
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 92 (10), 4626-4630 (1995)
PUBMED 7753853
REFERENCE 8 (bases 1 to 6112)
AUTHORS Suzuki,Y., Aoki,Y., Ishida,Y., Chiba,Y., Iwamatsu,A., Kishino,T.,
Niikawa,N., Matsubara,Y. and Narisawa,K.
TITLE Isolation and characterization of mutations in the human
holocarboxylase synthetase cDNA
JOURNAL Nat. Genet. 8 (2), 122-128 (1994)
PUBMED 7842009
REFERENCE 9 (bases 1 to 6112)
AUTHORS Chiba,Y., Suzuki,Y., Aoki,Y., Ishida,Y. and Narisawa,K.
TITLE Purification and properties of bovine liver holocarboxylase
synthetase
JOURNAL Arch. Biochem. Biophys. 313 (1), 8-14 (1994)
PUBMED 8053691
REFERENCE 10 (bases 1 to 6112)
AUTHORS Narisawa,K., Arai,N., Igarashi,Y., Satoh,T., Tada,K. and Hirooka,Y.
TITLE Clinical and biochemical findings on a child with multiple
biotin-responsive carboxylase deficiencies
JOURNAL J. Inherit. Metab. Dis. 5 (2), 67-68 (1982)
PUBMED 6133032
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from AP000704.2, AP000703.1,
AP000702.1, AP000698.1 and AP000697.1.
Summary: This gene encodes an enzyme that catalyzes the binding of
biotin to carboxylases and histones. The protein plays an important
role in gluconeogenesis, fatty acid synthesis and branched chain
amino acid catabolism. Defects in this gene are the cause of
holocarboxylase synthetase deficiency. Multiple alternatively
spliced variants, encoding the same protein, have been
identified.[provided by RefSeq, Jun 2011].
Transcript Variant: This variant (2) differs in the 5' UTR compared
to variant 1. Variants 1, 2 and 3 encode the same protein.
Sequence Note: The RefSeq transcript and protein were derived from
genomic sequence to make the sequence consistent with the reference
genome assembly. The genomic coordinates used for the transcript
record were based on alignments.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
CDS exon combination :: D87328.1, D23672.2 [ECO:0000331]
RNAseq introns :: mixed/partial sample support ERS025081,
ERS025084 [ECO:0000350]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-181 AP000704.2 36707-36887 c
182-316 AP000704.2 17959-18093 c
317-462 AP000704.2 1932-2077 c
463-625 AP000703.1 31690-31852 c
626-1569 AP000703.1 29307-30250 c
1570-1752 AP000703.1 23109-23291 c
1753-2024 AP000702.1 7840-8111 c
2025-2092 AP000698.1 10612-10679 c
2093-2253 AP000698.1 8406-8566 c
2254-2368 AP000698.1 3121-3235 c
2369-2517 AP000698.1 1-149 c
2518-2582 AP000697.1 129965-130029 c
2583-6112 AP000697.1 124311-127840 c
FEATURES Location/Qualifiers
source 1..6112
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="21"
/map="21q22.13"
gene 1..6112
/gene="HLCS"
/gene_synonym="HCS"
/note="holocarboxylase synthetase
(biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing))
ligase)"
/db_xref="GeneID:3141"
/db_xref="HGNC:4976"
/db_xref="MIM:609018"
exon 1..181
/gene="HLCS"
/gene_synonym="HCS"
/inference="alignment:Splign:1.39.8"
exon 182..316
/gene="HLCS"
/gene_synonym="HCS"
/inference="alignment:Splign:1.39.8"
exon 317..462
/gene="HLCS"
/gene_synonym="HCS"
/inference="alignment:Splign:1.39.8"
misc_feature 451..453
/gene="HLCS"
/gene_synonym="HCS"
/note="upstream in-frame stop codon"
exon 463..625
/gene="HLCS"
/gene_synonym="HCS"
/inference="alignment:Splign:1.39.8"
CDS 574..2754
/gene="HLCS"
/gene_synonym="HCS"
/EC_number="6.3.4.10"
/EC_number="6.3.4.11"
/EC_number="6.3.4.15"
/EC_number="6.3.4.9"
/note="holocarboxylase synthetase
(biotin-(proprionyl-Coenzyme A-carboxylase
(ATP-hydrolysing)) ligase); biotin apo-protein ligase;
biotin--[methylmalonyl-CoA-carboxytransferase] ligase;
biotin--[methylcrotonoyl-CoA-carboxylase] ligase;
biotin--[acetyl-CoA-carboxylase] ligase"
/codon_start=1
/product="biotin--protein ligase"
/protein_id="NP_001229714.1"
/db_xref="GI:338753400"
/db_xref="CCDS:CCDS13647.1"
/db_xref="GeneID:3141"
/db_xref="HGNC:4976"
/db_xref="MIM:609018"
/translation="
MEDRLHMDNGLVPQKIVSVHLQDSTLKEVKDQVSNKQAQILEPKPEPSLEIKPEQDGMEHVGRDDPKALGEEPKQRRGSASGSEPAGDSDRGGGPVEHYHLHLSSCHECLELENSTIESVKFASAENIPDLPYDYSSSLESVADETSPEREGRRVNLTGKAPNILLYVGSDSQEALGRFHEVRSVLADCVDIDSYILYHLLEDSALRDPWTDNCLLLVIATRESIPEDLYQKFMAYLSQGGKVLGLSSSFTFGGFQVTSKGALHKTVQNLVFSKADQSEVKLSVLSSGCRYQEGPVRLSPGRLQGHLENEDKDRMIVHVPFGTRGGEAVLCQVHLELPPSSNIVQTPEDFNLLKSSNFRRYEVLREILTTLGLSCDMKQVPALTPLYLLSAAEEIRDPLMQWLGKHVDSEGEIKSGQLSLRFVSSYVSEVEITPSCIPVVTNMEAFSSEHFNLEIYRQNLQTKQLGKVILFAEVTPTTMRLLDGLMFQTPQEMGLIVIAARQTEGKGRGGNVWLSPVGCALSTLLISIPLRSQLGQRIPFVQHLMSVAVVEAVRSIPEYQDINLRVKWPNDIYYSDLMKIGGVLVNSTLMGETFYILIGCGFNVTNSNPTICINDLITEYNKQHKAELKPLRADYLIARVVTVLEKLIKEFQDKGPNSVLPLYYRYWVHSGQQVHLGSAEGPKVSIVGLDDSGFLQVHQEGGEVVTVHPDGNSFDMLRNLILPKRR
"
misc_feature 1012..1014
/gene="HLCS"
/gene_synonym="HCS"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
(P50747.1); phosphorylation site"
misc_feature 1177..1953
/gene="HLCS"
/gene_synonym="HCS"
/note="Type 1 glutamine amidotransferase (GATase1)-like
domain; Region: GAT_1; cl00020"
/db_xref="CDD:206787"
misc_feature 1984..2721
/gene="HLCS"
/gene_synonym="HCS"
/note="Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme
metabolism]; Region: BirA; COG0340"
/db_xref="CDD:30688"
misc_feature 2047..2382
/gene="HLCS"
/gene_synonym="HCS"
/note="Biotin/lipoate A/B protein ligase family; Region:
BPL_LplA_LipB; pfam03099"
/db_xref="CDD:202534"
misc_feature 2578..2721
/gene="HLCS"
/gene_synonym="HCS"
/note="Biotin protein ligase C terminal domain; Region:
BPL_C; pfam02237"
/db_xref="CDD:111161"
exon 626..1569
/gene="HLCS"
/gene_synonym="HCS"
/inference="alignment:Splign:1.39.8"
variation 858
/gene="HLCS"
/gene_synonym="HCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:2230182"
variation 1407
/gene="HLCS"
/gene_synonym="HCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1065758"
exon 1570..1752
/gene="HLCS"
/gene_synonym="HCS"
/inference="alignment:Splign:1.39.8"
variation 1626
/gene="HLCS"
/gene_synonym="HCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:1065759"
exon 1753..2024
/gene="HLCS"
/gene_synonym="HCS"
/inference="alignment:Splign:1.39.8"
exon 2025..2092
/gene="HLCS"
/gene_synonym="HCS"
/inference="alignment:Splign:1.39.8"
exon 2093..2253
/gene="HLCS"
/gene_synonym="HCS"
/inference="alignment:Splign:1.39.8"
exon 2254..2368
/gene="HLCS"
/gene_synonym="HCS"
/inference="alignment:Splign:1.39.8"
exon 2369..2582
/gene="HLCS"
/gene_synonym="HCS"
/inference="alignment:Splign:1.39.8"
exon 2583..6112
/gene="HLCS"
/gene_synonym="HCS"
/inference="alignment:Splign:1.39.8"
STS 2706..2819
/gene="HLCS"
/gene_synonym="HCS"
/standard_name="SHGC-52086"
/db_xref="UniSTS:22825"
STS 2791..3065
/gene="HLCS"
/gene_synonym="HCS"
/standard_name="SHGC-12620"
/db_xref="UniSTS:31493"
STS 3085..3209
/gene="HLCS"
/gene_synonym="HCS"
/standard_name="WI-15188"
/db_xref="UniSTS:77963"
STS 3939..4177
/gene="HLCS"
/gene_synonym="HCS"
/standard_name="SHGC-53043"
/db_xref="UniSTS:6445"
variation 3942
/gene="HLCS"
/gene_synonym="HCS"
/replace="c"
/replace="t"
/db_xref="dbSNP:3191054"
variation 4358
/gene="HLCS"
/gene_synonym="HCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1050706"
variation 4360
/gene="HLCS"
/gene_synonym="HCS"
/replace="a"
/replace="c"
/db_xref="dbSNP:1050707"
polyA_signal 4930..4935
/gene="HLCS"
/gene_synonym="HCS"
STS 4941..5100
/gene="HLCS"
/gene_synonym="HCS"
/standard_name="SHGC-87611"
/db_xref="UniSTS:81190"
polyA_site 4950
/gene="HLCS"
/gene_synonym="HCS"
STS 5093..5279
/gene="HLCS"
/gene_synonym="HCS"
/standard_name="SHGC-52136"
/db_xref="UniSTS:55079"
variation 5376
/gene="HLCS"
/gene_synonym="HCS"
/replace="a"
/replace="g"
/db_xref="dbSNP:14407"
polyA_signal 5687..5692
/gene="HLCS"
/gene_synonym="HCS"
STS 5691..5819
/gene="HLCS"
/gene_synonym="HCS"
/standard_name="SHGC-87607"
/db_xref="UniSTS:51963"
polyA_site 5808
/gene="HLCS"
/gene_synonym="HCS"
ORIGIN
gtgctggcgaggcagggcctgagcagccagtggagaagggcagcgggaagtgcgctgtgcaggagccagacgtctcagcccgtgtggccagaggtggcaggggcgcggcctgagcggggctggggcgcgggcaggatttggggctgcgccgaggggcgtcccgacctggccctttgccacgtccattgaagacttgaacaagtgggccctatttcttgtgtctccttttatacttgaagcagaacacatagcatttgtgacggagagcatttgggtacaaagtgagaatttacagagatcatcctcttcagaaacagttcggtttttgcccactagggatgatgtggtttctcatgaggttacttgctctaaaggactttatattttggaaccataagagcacccttgtggcccaggcactttatggatgatcccttttagtgctcccagtaaccttccaagattgtcaagtggtcagactgttgtttgccattagcttgcagacctggggatccttatcggctaattgctgaagcaagtgtggacaacttcagcaagctgggggtggcgttcatggaagatagactccacatggataatggactggtaccccaaaagattgtgtcggtgcacttgcaggactccactctgaaggaagttaaggatcaggtctcaaacaagcaagcccagatcctagagccgaagcctgaaccttctcttgagattaagcctgagcaggacggtatggagcatgttggcagagatgacccaaaggctcttggtgaagaacccaaacaaaggagaggcagtgcctctgggagtgagcctgctggggacagtgacaggggagggggccccgttgagcattatcacctccatctgtctagttgccacgagtgtctggaacttgagaacagcaccattgagtcagtcaagtttgcgtctgccgagaacattccagaccttccctacgattatagcagcagtttggagagtgttgctgatgagacctcccccgaaagagaagggaggagagtcaacctcacgggaaaggcacccaacatcctcctctatgtgggctccgactcccaggaagccctcggccggttccacgaggtccggtctgtgctggccgactgtgtggacattgacagttatattctctaccacctgctggaggacagtgctctcagagacccgtggacggacaactgtctgctgttggtcattgctaccagggagtccattcccgaagacctgtaccagaagttcatggcctatctttctcagggagggaaggtgttgggcctgtcttcatccttcacctttggtggctttcaggtgacaagcaagggtgcactgcacaagacagtccagaacttggttttctccaaggctgaccagagcgaggtgaagctcagcgtcttgagcagtggctgcaggtaccaggaaggccccgtccggctcagccccggcaggctccagggccacctggagaatgaggacaaggacaggatgattgtgcatgtgccttttggaactcgcgggggagaagctgttctttgccaggtgcacttagaactacctcccagctccaacatagtgcaaactccagaagattttaacttgctcaagtcaagcaattttagaagatacgaagtccttagagagattctgacaacccttggcctcagctgtgacatgaaacaagttcctgccttaactcctctttacttgctgtcagctgcggaggaaatcagggatcctcttatgcagtggcttgggaaacatgtggactccgagggagaaataaaatccggccagctctctcttagatttgtttcatcctacgtgtctgaagtagaaataaccccatcttgtatacctgtggtgaccaacatggaggccttctcatcagaacatttcaacttagagatctatcgccaaaatctgcagaccaagcagttggggaaagtaattttgtttgccgaagtgacccccacaacgatgcgtctcctggatgggctgatgtttcagacaccgcaggaaatgggcttaatagtgatcgcggcccggcagaccgagggcaaaggacggggagggaatgtgtggctgagccctgtgggatgtgctctttctactctgctcatctccattccactgagatcccagctgggacagaggatcccgtttgtccagcatctgatgtccgtggctgtcgtggaagcagtgaggtccattcccgagtatcaggatatcaacttacgagtgaagtggcccaacgatatttattacagtgacctcatgaagatcggcggagttctggttaactcaacactcatgggagaaacattttatatacttattggctgtggatttaatgtgactaacagtaaccctaccatctgcatcaacgacctcatcacagaatacaataaacaacacaaggcagaactgaagcccttaagagccgattatctcatcgccagagtcgtgactgtgctggagaaactgatcaaagagtttcaggacaaagggcccaacagcgtccttcccctttattaccgatactgggtccacagtggtcagcaagtccatctgggcagcgcagagggaccaaaggtgtccatcgttggcctggacgattctggcttcctccaggttcaccaggagggcggcgaggttgtgactgtgcacccggacggcaactccttcgacatgctgagaaacctcatcctccccaaacggcggtaatgccgggcgtccccgagacgcggctgcctgtccgtgcccatgcatctggaaatctaatttagagttgtaggtgaattttcttttcctccaattcatttgttaagtctttgttctttttctgtgtttctgtttgtttttaggtttgttttgttgtcgttttctttggtgtttgaagaggctctgggatagatggttaagaagtagaaaatttagtttagggaaagccctcccacaggtgggaaattgctctcccctctgtggcttggacttacgtttattgtcaaggggagtttttacatggaaatgacaatgggaaaattcagatattttcttagtagtgcagacctttacccctagtctatgaaaaaacaaaccaaaatatgctcttgcgcccaggccagtggtgagttagaggtatgctatcactgtttgtaagcatctggggaggtactgaactgtaagaacatgcttggacacttagtcattgttctgtgtttttattaatgaagaaaagggaagacagacttccaagagttactgtccacccggtggtgtggccccatagcgaagtctaaatgcctgtagagatagagctagctggtgtggttgcagtgaccttgtagaggaaatcagttcattactttgacatcattcagtgagctctcctttcctaaggaagtttaaatgtccttagttagggactgactttcttaagtaagtttaaatttactacatattgtgaagagacaggatcaagttcagaatccttaaatgtctgattaggcatcacttggatgaggaggtgggcgatttggctctgacagctggagatgaaggcacactcataccacatacaagggaggatttggagcttttaagccagtttcagatttactctgaaatgtggagcattcctgcaagactgtgcagctcacggaatatagaagacatggcattttactcagaagtcataagtttttgcccccctcatttacctcgtattaccaagaaagaaaatgttatcgatactaaacaccatcagttcagagggaggatgtgtgtgtgtgcccgcatatgtgtgtgcgtgcgtgtgtgcgcacatagctttaaaagaagacattcaaaatttgatgtgctacaagcctcatgaaagaacaaaagaaatgaagccttttgatatgcattcgctattcccagatgtacgccatgccttttccatgtccctcctatctctgttgaacttatgaatcatactcattacttttcagctttttaaaaggccaatttttgtccagttttctctcttccagtcccagctgaaattagtggaaagaaagtttgatggagctttcagctttgaacaaaatcccttcattgtaaactagcaccatctttatccaggtcttacccagtcaggctaattccagaaacttgtggtttttagtatagtctgtctacctttagccaggcacaggacagccctatgaaaaaatacccaatatatattttttggaaatgaaacattaaaagaacttaaaaagtaatttttggaaatgaggcttcaattagaattatttttctcaaaaaacaaacaaacaaaaaacacaaaaaaaaccactcttctccaaatgcccaagccttctttcaaaattagttagaaacttaagtaaaatacaagtccacaccatccccaaattacaaaatggacttacccttgagagggcatctgcagaatatcatcagggacaaagatctcgaggctaacgatgtaggtttcatttctcagactttgtaatataaggcaagccctctctcagagctgccatcatcactttttgaatttctttgggggttatttaatgaaaaacatgctatgttttgttttaagctgaagtcctattctggacactctgctttgggaaaaaatgttatcatttaatttcctttctgcaaattaaaactaatgaagtgtggccttgtcaaaggctatggagatgttccgggcatactgctgtgctctgtgctttccagcaggcgctcctccctcacgcaggagactcagttgtcctgagagagatgaagcagccttgaagcagatgctgcgttttccataaacctgattttgcctcacatgaaccaaagactctcaaaactccgcttctatagaattagctgaataaaggcattttactgatagctgttcgtgttagcgaaacctgtctacctgctatagcacactctccgatttgggccatttatgcaccccgcaacctgggatctcaaggagctttaaagtcttaatgggaacttggcattttcctgatgatctttaaaatgtggtcactaaactcaggattggcgtgtgcttttagaacactggagtagcccttgttttagaggctgtgcattgagtatcgaccgtattttgtaaaaggcaagatatcctcccttccaggctggtaacgggtttcaaggggactcttgaggaagtgccccctaaaatagaacacagcaataactgggcttcctgtccccacccccaccccagcagtgctctctggcactgggaactctgctagggagtggtggaagtaggaaggatttgtgtgcaaaggaaaatcgtggttgagtttcactgcagcaggctgacgttgcctgatgtgagagcaagtggccgactggggtgcgggtgcacaggtcgggggagcacaggccacagagcgcagcctctgggggtcccccaaggcacagcatatacagcatggtcgccccttgccctggagtctgggaacaaagagaggagccagcctccccgcactgcttcagatggaaaagggaggcagggtgggcttccgttctccagatctgtttgctcttaacaggcagaacatgggagaatccttattcctggttaatcactatgcatatttgaaataaaagaaagcgtaagcctctgcaattttaacttctcaaaggatgtctctgaaaagaatcactttaaaccaatgcctataaaaagcaagtctaccaaaataaactaagactttctatgtggtttgggctccctcttatttttacaagtttcatttttaaaagtaggcaactactttgggttacagtatttttattcatatttaaacatttttacaaaataaataaagtgttttacatagtaaggaatatgtacgtatttccaagtattaagaagccaagtgtttttttttttgacgtattattgacaaatgtattcagcgccatacacaagagaaatattattactccaaagaacgaaagttaacaaaactccaaagcaaaaacccttttaatggaggtgagaaataaatttaatgtaacaaca
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:3141 -> Molecular function: GO:0004077 [biotin-[acetyl-CoA-carboxylase] ligase activity] evidence: IEA
GeneID:3141 -> Molecular function: GO:0004078 [biotin-[methylcrotonoyl-CoA-carboxylase] ligase activity] evidence: IEA
GeneID:3141 -> Molecular function: GO:0004079 [biotin-[methylmalonyl-CoA-carboxytransferase] ligase activity] evidence: IEA
GeneID:3141 -> Molecular function: GO:0004080 [biotin-[propionyl-CoA-carboxylase (ATP-hydrolyzing)] ligase activity] evidence: IDA
GeneID:3141 -> Molecular function: GO:0005524 [ATP binding] evidence: IEA
GeneID:3141 -> Molecular function: GO:0009374 [biotin binding] evidence: IDA
GeneID:3141 -> Molecular function: GO:0018271 [biotin-protein ligase activity] evidence: IDA
GeneID:3141 -> Molecular function: GO:0018271 [biotin-protein ligase activity] evidence: IMP
GeneID:3141 -> Molecular function: GO:0019899 [enzyme binding] evidence: IPI
GeneID:3141 -> Molecular function: GO:0042803 [protein homodimerization activity] evidence: IEA
GeneID:3141 -> Biological process: GO:0006766 [vitamin metabolic process] evidence: TAS
GeneID:3141 -> Biological process: GO:0006767 [water-soluble vitamin metabolic process] evidence: TAS
GeneID:3141 -> Biological process: GO:0006768 [biotin metabolic process] evidence: TAS
GeneID:3141 -> Biological process: GO:0008283 [cell proliferation] evidence: IMP
GeneID:3141 -> Biological process: GO:0009305 [protein biotinylation] evidence: IDA
GeneID:3141 -> Biological process: GO:0016570 [histone modification] evidence: IDA
GeneID:3141 -> Biological process: GO:0044281 [small molecule metabolic process] evidence: TAS
GeneID:3141 -> Biological process: GO:0070781 [response to biotin] evidence: IDA
GeneID:3141 -> Biological process: GO:0071110 [histone biotinylation] evidence: IDA
GeneID:3141 -> Cellular component: GO:0000785 [chromatin] evidence: IDA
GeneID:3141 -> Cellular component: GO:0005652 [nuclear lamina] evidence: IDA
GeneID:3141 -> Cellular component: GO:0005737 [cytoplasm] evidence: IDA
GeneID:3141 -> Cellular component: GO:0005739 [mitochondrion] evidence: IEA
GeneID:3141 -> Cellular component: GO:0005829 [cytosol] evidence: IDA
GeneID:3141 -> Cellular component: GO:0005829 [cytosol] evidence: TAS
GeneID:3141 -> Cellular component: GO:0016363 [nuclear matrix] evidence: IDA
ANNOTATIONS from NCBI Entrez Gene (20130726):
NP_001229714 -> EC 6.3.4.10
NP_001229714 -> EC 6.3.4.11
NP_001229714 -> EC 6.3.4.15
NP_001229714 -> EC 6.3.4.9
by
@meso_cacase at
DBCLS
This page is licensed under a Creative Commons Attribution 2.1 Japan License.