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2024-04-19 18:48:58, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_001197237 3621 bp mRNA linear PRI 17-APR-2013
DEFINITION Homo sapiens butyrophilin, subfamily 2, member A2 (BTN2A2),
transcript variant 3, mRNA.
ACCESSION NM_001197237
VERSION NM_001197237.1 GI:308522745
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3621)
AUTHORS Shi,J., Levinson,D.F., Duan,J., Sanders,A.R., Zheng,Y., Pe'er,I.,
Dudbridge,F., Holmans,P.A., Whittemore,A.S., Mowry,B.J., Olincy,A.,
Amin,F., Cloninger,C.R., Silverman,J.M., Buccola,N.G.,
Byerley,W.F., Black,D.W., Crowe,R.R., Oksenberg,J.R., Mirel,D.B.,
Kendler,K.S., Freedman,R. and Gejman,P.V.
TITLE Common variants on chromosome 6p22.1 are associated with
schizophrenia
JOURNAL Nature 460 (7256), 753-757 (2009)
PUBMED 19571809
REFERENCE 2 (bases 1 to 3621)
AUTHORS Mungall,A.J., Palmer,S.A., Sims,S.K., Edwards,C.A., Ashurst,J.L.,
Wilming,L., Jones,M.C., Horton,R., Hunt,S.E., Scott,C.E.,
Gilbert,J.G., Clamp,M.E., Bethel,G., Milne,S., Ainscough,R.,
Almeida,J.P., Ambrose,K.D., Andrews,T.D., Ashwell,R.I.,
Babbage,A.K., Bagguley,C.L., Bailey,J., Banerjee,R., Barker,D.J.,
Barlow,K.F., Bates,K., Beare,D.M., Beasley,H., Beasley,O.,
Bird,C.P., Blakey,S., Bray-Allen,S., Brook,J., Brown,A.J.,
Brown,J.Y., Burford,D.C., Burrill,W., Burton,J., Carder,C.,
Carter,N.P., Chapman,J.C., Clark,S.Y., Clark,G., Clee,C.M.,
Clegg,S., Cobley,V., Collier,R.E., Collins,J.E., Colman,L.K.,
Corby,N.R., Coville,G.J., Culley,K.M., Dhami,P., Davies,J.,
Dunn,M., Earthrowl,M.E., Ellington,A.E., Evans,K.A., Faulkner,L.,
Francis,M.D., Frankish,A., Frankland,J., French,L., Garner,P.,
Garnett,J., Ghori,M.J., Gilby,L.M., Gillson,C.J., Glithero,R.J.,
Grafham,D.V., Grant,M., Gribble,S., Griffiths,C., Griffiths,M.,
Hall,R., Halls,K.S., Hammond,S., Harley,J.L., Hart,E.A.,
Heath,P.D., Heathcott,R., Holmes,S.J., Howden,P.J., Howe,K.L.,
Howell,G.R., Huckle,E., Humphray,S.J., Humphries,M.D., Hunt,A.R.,
Johnson,C.M., Joy,A.A., Kay,M., Keenan,S.J., Kimberley,A.M.,
King,A., Laird,G.K., Langford,C., Lawlor,S., Leongamornlert,D.A.,
Leversha,M., Lloyd,C.R., Lloyd,D.M., Loveland,J.E., Lovell,J.,
Martin,S., Mashreghi-Mohammadi,M., Maslen,G.L., Matthews,L.,
McCann,O.T., McLaren,S.J., McLay,K., McMurray,A., Moore,M.J.,
Mullikin,J.C., Niblett,D., Nickerson,T., Novik,K.L., Oliver,K.,
Overton-Larty,E.K., Parker,A., Patel,R., Pearce,A.V., Peck,A.I.,
Phillimore,B., Phillips,S., Plumb,R.W., Porter,K.M., Ramsey,Y.,
Ranby,S.A., Rice,C.M., Ross,M.T., Searle,S.M., Sehra,H.K.,
Sheridan,E., Skuce,C.D., Smith,S., Smith,M., Spraggon,L.,
Squares,S.L., Steward,C.A., Sycamore,N., Tamlyn-Hall,G., Tester,J.,
Theaker,A.J., Thomas,D.W., Thorpe,A., Tracey,A., Tromans,A.,
Tubby,B., Wall,M., Wallis,J.M., West,A.P., White,S.S.,
Whitehead,S.L., Whittaker,H., Wild,A., Willey,D.J., Wilmer,T.E.,
Wood,J.M., Wray,P.W., Wyatt,J.C., Young,L., Younger,R.M.,
Bentley,D.R., Coulson,A., Durbin,R., Hubbard,T., Sulston,J.E.,
Dunham,I., Rogers,J. and Beck,S.
TITLE The DNA sequence and analysis of human chromosome 6
JOURNAL Nature 425 (6960), 805-811 (2003)
PUBMED 14574404
REFERENCE 3 (bases 1 to 3621)
AUTHORS Cavaletto,M., Giuffrida,M.G., Fortunato,D., Gardano,L.,
Dellavalle,G., Napolitano,L., Giunta,C., Bertino,E., Fabris,C. and
Conti,A.
TITLE A proteomic approach to evaluate the butyrophilin gene family
expression in human milk fat globule membrane
JOURNAL Proteomics 2 (7), 850-856 (2002)
PUBMED 12124930
REFERENCE 4 (bases 1 to 3621)
AUTHORS Rhodes,D.A., Stammers,M., Malcherek,G., Beck,S. and Trowsdale,J.
TITLE The cluster of BTN genes in the extended major histocompatibility
complex
JOURNAL Genomics 71 (3), 351-362 (2001)
PUBMED 11170752
REFERENCE 5 (bases 1 to 3621)
AUTHORS Henry,J., Miller,M.M. and Pontarotti,P.
TITLE Structure and evolution of the extended B7 family
JOURNAL Immunol. Today 20 (6), 285-288 (1999)
PUBMED 10354554
REMARK Review article
REFERENCE 6 (bases 1 to 3621)
AUTHORS Ruddy,D.A., Kronmal,G.S., Lee,V.K., Mintier,G.A., Quintana,L.,
Domingo,R. Jr., Meyer,N.C., Irrinki,A., McClelland,E.E., Fullan,A.,
Mapa,F.A., Moore,T., Thomas,W., Loeb,D.B., Harmon,C.,
Tsuchihashi,Z., Wolff,R.K., Schatzman,R.C. and Feder,J.N.
TITLE A 1.1-Mb transcript map of the hereditary hemochromatosis locus
JOURNAL Genome Res. 7 (5), 441-456 (1997)
PUBMED 9149941
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from DC373063.1, BC014021.2 and
BC013258.2.
Summary: Butyrophilin is the major protein associated with fat
droplets in the milk. This gene is a member of the BTN2 subfamily
of genes, which encode proteins belonging to the butyrophilin
protein family. The gene is located in a cluster on chromosome 6,
consisting of seven genes belonging to the expanding
B7/butyrophilin-like group, a subset of the immunoglobulin gene
superfamily. The encoded protein is a type I receptor glycoprotein
involved in lipid, fatty-acid and sterol metabolism. Several
alternatively spliced transcript variants encoding different
isoforms have been found for this gene. [provided by RefSeq, Oct
2010].
Transcript Variant: This variant (3) has an alternate 5' UTR exon
and encodes the same longest isoform (a) compared to variant 1.
##Evidence-Data-START##
Transcript exon combination :: BC014021.2 [ECO:0000332]
RNAseq introns :: mixed/partial sample support
ERS025081, ERS025082 [ECO:0000350]
##Evidence-Data-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-24 DC373063.1 1-24
25-2730 BC014021.2 1-2706
2731-3621 BC013258.2 2281-3171
FEATURES Location/Qualifiers
source 1..3621
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="6"
/map="6p22.1"
gene 1..3621
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/note="butyrophilin, subfamily 2, member A2"
/db_xref="GeneID:10385"
/db_xref="HGNC:1137"
/db_xref="MIM:613591"
exon 1..103
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/inference="alignment:Splign:1.39.8"
variation 21
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:9467741"
variation 85
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="c"
/db_xref="dbSNP:375893732"
variation 86..87
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace=""
/replace="ag"
/db_xref="dbSNP:3832422"
misc_feature 98..100
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/note="upstream in-frame stop codon"
exon 104..227
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/inference="alignment:Splign:1.39.8"
CDS 134..1705
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/note="isoform a precursor is encoded by transcript
variant 3; butyrophilin 2"
/codon_start=1
/product="butyrophilin subfamily 2 member A2 isoform a
precursor"
/protein_id="NP_001184166.1"
/db_xref="GI:308522746"
/db_xref="CCDS:CCDS4606.1"
/db_xref="GeneID:10385"
/db_xref="HGNC:1137"
/db_xref="MIM:613591"
/translation="
MEPAAALHFSLPASLLLLLLLLLLSLCALVSAQFTVVGPANPILAMVGENTTLRCHLSPEKNAEDMEVRWFRSQFSPAVFVYKGGRERTEEQMEEYRGRITFVSKDINRGSVALVIHNVTAQENGIYRCYFQEGRSYDEAILRLVVAGLGSKPLIEIKAQEDGSIWLECISGGWYPEPLTVWRDPYGEVVPALKEVSIADADGLFMVTTAVIIRDKYVRNVSCSVNNTLLGQEKETVIFIPESFMPSASPWMVALAVILTASPWMVSMTVILAVFIIFMAVSICCIKKLQREKKILSGEKKVEQEEKEIAQQLQEELRWRRTFLHAADVVLDPDTAHPELFLSEDRRSVRRGPYRQRVPDNPERFDSQPCVLGWESFASGKHYWEVEVENVMVWTVGVCRHSVERKGEVLLIPQNGFWTLEMFGNQYRALSSPERILPLKESLCRVGVFLDYEAGDVSFYNMRDRSHIYTCPRSAFTVPVRPFFRLGSDDSPIFICPALTGASGVMVPEEGLKLHRVGTHQSL
"
sig_peptide 134..229
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/inference="COORDINATES: ab initio prediction:SignalP:4.0"
mat_peptide 230..1702
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/product="butyrophilin subfamily 2 member A2 isoform a"
misc_feature 230..571
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/note="Immunoglobulin V-set domain; Region: V-set;
pfam07686"
/db_xref="CDD:203725"
misc_feature 275..574
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/note="Immunoglobulin (Ig)-like domain of myelin
oligodendrocyte glycoprotein (MOG); Region: Ig_MOG_like;
cd05713"
/db_xref="CDD:143190"
misc_feature order(323..328,383..385,416..418,527..529,533..550)
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/note="antigen binding site; other site"
/db_xref="CDD:143190"
misc_feature 587..835
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/note="Immunoglobulin domain; Region: Ig; cl11960"
/db_xref="CDD:213125"
misc_feature 929..991
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q8WVV5.2);
transmembrane region"
misc_feature 1109..1264
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/note="associated with SPRY domains; Region: PRY;
smart00589"
/db_xref="CDD:128857"
misc_feature 1268..1624
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/note="Domain in SPla and the RYanodine Receptor; Region:
SPRY; smart00449"
/db_xref="CDD:128725"
variation 139
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:375369181"
variation 141
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:202213069"
variation 144
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:73736234"
variation 172
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="c"
/db_xref="dbSNP:147636357"
variation 190
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:115247877"
exon 228..575
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/inference="alignment:Splign:1.39.8"
variation 241
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:138070617"
variation 242
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143653188"
variation 248
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="g"
/db_xref="dbSNP:57038103"
variation 293
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:370867259"
variation 310
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:150302333"
variation 311
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:181037825"
variation 338
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:375285642"
variation 339
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:368009368"
variation 374
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="g"
/replace="t"
/db_xref="dbSNP:372237219"
variation 376
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:376950043"
variation 396
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:376558792"
variation 421
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:112257227"
variation 422
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:367692328"
variation 423
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:144702884"
variation 459
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:149453161"
variation 460
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:377645117"
variation 487
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:143017993"
variation 545
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:146154371"
variation 561
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201687793"
exon 576..857
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/inference="alignment:Splign:1.39.8"
variation 635
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="g"
/db_xref="dbSNP:369291221"
variation 649
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:142411775"
variation 688
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="g"
/db_xref="dbSNP:76088803"
variation 691
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="c"
/db_xref="dbSNP:200834687"
variation 707
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:144410497"
variation 715
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:372854548"
variation 725
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:200036284"
variation 728
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201605260"
variation 732
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:139541725"
variation 740
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:62617839"
variation 760
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:370196656"
variation 798
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:145439434"
variation 817
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:201008184"
variation 821
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:200096466"
variation 824
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:373346354"
variation 855
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:201995913"
exon 858..1064
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/inference="alignment:Splign:1.39.8"
variation 861
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="c"
/db_xref="dbSNP:375385023"
variation 920
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:369920399"
variation 932
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="g"
/replace="t"
/db_xref="dbSNP:113893469"
variation 933
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:373492069"
variation 941
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="g"
/db_xref="dbSNP:147003451"
variation 1064
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="g"
/db_xref="dbSNP:201972159"
exon 1065..1085
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/inference="alignment:Splign:1.39.8"
exon 1086..1112
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/inference="alignment:Splign:1.39.8"
exon 1113..3612
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/inference="alignment:Splign:1.39.8"
variation 1113
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:147646031"
variation 1117
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:142151655"
variation 1123
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="c"
/db_xref="dbSNP:368319822"
variation 1138
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:148323426"
variation 1139
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:142803339"
variation 1144
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="t"
/db_xref="dbSNP:150431575"
variation 1147
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:370826490"
variation 1148
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:138172438"
variation 1169
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:374005579"
variation 1170
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:200473019"
variation 1176
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:112054667"
variation 1178
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:372706575"
variation 1195
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:368149710"
variation 1229
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:200468059"
variation 1251
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="g"
/db_xref="dbSNP:200546581"
variation 1264
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:375971811"
variation 1266
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:374942833"
variation 1267
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:200047445"
variation 1278
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="t"
/db_xref="dbSNP:142785600"
variation 1283..1284
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace=""
/replace="g"
/db_xref="dbSNP:34248025"
variation 1303
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:146142561"
variation 1304
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="g"
/db_xref="dbSNP:372254650"
variation 1309
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="g"
/replace="t"
/db_xref="dbSNP:140196606"
variation 1311
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="t"
/db_xref="dbSNP:149403458"
variation 1324
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="g"
/replace="t"
/db_xref="dbSNP:181793664"
variation 1330
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:202000782"
variation 1334
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="g"
/db_xref="dbSNP:148562624"
variation 1391
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:369578278"
variation 1415..1416
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace=""
/replace="g"
/db_xref="dbSNP:35755065"
variation 1415
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:62617840"
variation 1421
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="g"
/db_xref="dbSNP:199832316"
variation 1427
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="t"
/db_xref="dbSNP:114760306"
variation 1435
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:139419531"
variation 1444
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:2072802"
variation 1467
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201353973"
variation 1468
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:372541099"
variation 1473
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="g"
/db_xref="dbSNP:200888343"
variation 1475
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:376736237"
variation 1494
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:147634987"
variation 1512
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:111615265"
variation 1523
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:375693447"
variation 1531
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:1614887"
variation 1543
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:369209046"
variation 1550
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:145542993"
variation 1551
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:200276371"
variation 1568
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:16891646"
variation 1600
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="g"
/replace="t"
/db_xref="dbSNP:376227483"
variation 1641
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:369257115"
variation 1650
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:143694906"
variation 1658
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:114098566"
variation 1671
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="c"
/db_xref="dbSNP:73736249"
variation 1680
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="g"
/db_xref="dbSNP:199706137"
variation 1714
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="c"
/db_xref="dbSNP:377572514"
variation 1733
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:370709739"
variation 1735
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="g"
/db_xref="dbSNP:201460456"
variation 1747
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:190569086"
variation 1755
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="g"
/replace="t"
/db_xref="dbSNP:370507187"
variation 1810
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:144477860"
variation 1825
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:111432027"
variation 1833
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:181721317"
variation 1882
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:372246478"
variation 1902
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:186915774"
variation 1997
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:3927423"
variation 2144..2145
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace=""
/replace="ttc"
/db_xref="dbSNP:201274736"
variation 2297
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="c"
/db_xref="dbSNP:1804836"
STS 2364..2476
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/standard_name="NIB885"
/db_xref="UniSTS:41935"
variation 2439
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:75254848"
variation 2441
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="c"
/db_xref="dbSNP:191285742"
variation 2461
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:140325542"
variation 2477
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="c"
/db_xref="dbSNP:77055120"
STS 2488..2696
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/standard_name="RH15843"
/db_xref="UniSTS:21190"
variation 2490
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="g"
/replace="t"
/db_xref="dbSNP:182538207"
variation 2585
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:75435297"
variation 2669
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="t"
/db_xref="dbSNP:7355"
variation 2686..2687
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace=""
/replace="a"
/db_xref="dbSNP:138497943"
variation 2830
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:1131936"
variation 2861
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:149930183"
variation 2872
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="g"
/replace="t"
/db_xref="dbSNP:55674248"
variation 2875
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:61527210"
variation 3016
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:184920379"
variation 3042
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="t"
/db_xref="dbSNP:113353347"
variation 3083
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:72500812"
variation 3237
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:59001682"
variation 3271
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="c"
/replace="t"
/db_xref="dbSNP:73387026"
variation 3544
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
/replace="a"
/replace="g"
/db_xref="dbSNP:189684950"
polyA_signal 3592..3597
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
polyA_site 3612
/gene="BTN2A2"
/gene_synonym="BT2.2; BTF2"
ORIGIN
atgctttgttgtctggtggtgactgtgcccatgggtgagttgtatcggaaaatcgtcatgtgaggatcagaggggaaaagaaaacagaggttagttctagaaggcctctggtctctgcctgccctgggtgctcatggaaccagctgctgctctgcacttctccctgccagcctccctcctcctcctcctgctcctcctccttctcagcctgtgtgcactggtctcagcccagtttactgtcgtggggccagctaatcccatcctggccatggtgggagaaaacactacattacgctgccatctgtcacccgagaaaaatgctgaggacatggaggtgcggtggttccggtctcagttctcccccgcagtgtttgtgtataagggtgggagagagagaacagaggagcagatggaggagtaccggggaagaatcacctttgtgagcaaagacatcaacaggggcagcgtggccctggtcatacataacgtcacagcccaggagaatgggatctaccgctgttacttccaagaaggcaggtcctacgatgaggccatcctacgcctcgtggtggcaggccttgggtctaagcccctcattgaaatcaaggcccaagaggatgggagcatctggctggagtgcatatctggagggtggtacccagagcccctcacagtgtggagggacccctacggtgaggttgtgcccgccctgaaggaggtttccatcgctgatgctgacggcctcttcatggtcaccacagctgtgatcatcagagacaagtatgtgaggaatgtgtcctgctctgtcaacaacaccctgctcggccaggagaaggaaactgtcatttttattccagaatcctttatgcccagcgcatctccctggatggtggccctagctgtcatcctgaccgcatctccctggatggtgtccatgactgtcatcctggctgttttcatcatcttcatggctgtcagcatctgttgcatcaagaaacttcaaagggaaaaaaagattctgtcaggggaaaagaaagttgaacaagaggaaaaagaaattgcacagcaacttcaagaagaattgcgatggagaagaacattcttacatgctgctgatgtggtcctggatccagacaccgctcatcccgagctcttcctgtcagaggaccggagaagtgtgaggcggggcccctacaggcagagagtgcctgacaacccagagagattcgacagtcagccttgtgtcctgggatgggagagcttcgcctcagggaaacattactgggaggtggaggtggaaaacgtgatggtgtggactgtgggggtctgcagacacagtgttgagaggaaaggggaggtcctgctgattcctcagaatggcttctggaccctggagatgtttggaaaccaataccgggccctgtcctcccctgagaggattctccctttgaaggagtccctttgccgggtgggcgtcttcctggactatgaagctggagatgtctccttctacaacatgagggacagatcgcacatctacacatgtccccgttcagcctttactgtgcctgtgaggcccttcttcaggttagggtctgatgacagccccatcttcatctgccctgcactcacaggagccagtggggtcatggtgcctgaagagggcctgaaacttcacagagtggggacccaccagagcctatagaatcaattccttggactcacagccatgcagataagccctggccatctcagcagccaccgcacaacccccctaatgaaagacacgccctcctcccctctggtcacgtaagagaacatcttccagctgcctttttcacacccactccagccctctgccccagttttctcctcctcactagtctgtggctttagtagttcctttgcttgtaattatgggatgggatccaggcatagggaactagttgtttcatagctcccagtcaaaaagaaagtgagagaagctgttgggcagcgaacctactgtttaaaatcaggataaccacattaagcccaatatgccagttggcaccagatgctgtggacttggaatgaggccaacagggttcaccaggatgagagaggagagaggaatccacaggaccaccagaagggagagggaaccagatatgcagatcagagatagaggaagtggaaccagagagctgggagggaccaaggttgtaaggatggctaagtcccaccataagagctaaagggtcctgggagatgatggctcatttccacccaaccccaggatttccacagcacacacccacaggcctggacctgggatgaagatgaatgaagaacatggactcatgtggatgtggtttggctcagatgtccctgcaataaacaaggggtcagtacttagtccctgagtgtggttgaggtttgaggtcctggtcgagcagggcagtactggaccaggtctacgtcagcattcaggttcaatggggacaccagtggcttcaaacttcctgatctaattatgtttttagacacttagaagttattgaggactttaaagagcttttgtttatttgggttaatatttatgacatttgacattgaaacaaaaatttaaaatgttatcttttaatttatgttaaaatagcattaataaatcagttataggttaatgtagataggatgttttgtgaaaaagcaatctattgtgtccaaataaaaaaacaaaaagtgtgacactggttaactttttccagatctcatgtctggcttaataagagatatttgtattatcatatctgcctttgtattaaacctattggtatatcataggtcatgttagctcaaaaaaactttactgcacactactgagagaatgagatgaaaaacgattaatgtttcattattattattgtgaaaatattattaacactggggactccttaagagtacatcagagttctctctaggaatcccaaaaccacattttgaaactagaatagtggatcctggaagttaatccatgtgctggttaattttagatgtcaacctgactggattaaggaatacctagacagctggtacaacattatttctgggtgtgtctgtgagtgtgtttccagaagagattggcaagtgagtcagtgggaaattctctccttctgttggctgggtgcccaatacaacaaaaaggcagaggaaaggcaaattcttctctcctctggagctgagacactcttcttcttctgcccttggacatcagaactcctggctctccggcctttgaacttcaggacttgtaccaggaggccctgggttctcaggcctttggctttggactgagagttacacaatcagcttccctggttctgaggctttcagacttaaactgagccatgctaccagcatcccagggtctccagcctacagatgagctgttgtgcgatttcttagcctccataatcacatgagccaatctccttaataaatgcctgctcatagatctgtatctacatctatatctgtatgtgcatctatatctatgcctatatctatatctatatcatattgattttgtctctctggagaaccctgactaataaaatgaggcatctaaaaaaaaaaaaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:10385 -> Biological process: GO:0031324 [negative regulation of cellular metabolic process] evidence: ISS
GeneID:10385 -> Biological process: GO:0046007 [negative regulation of activated T cell proliferation] evidence: ISS
GeneID:10385 -> Biological process: GO:0050710 [negative regulation of cytokine secretion] evidence: ISS
GeneID:10385 -> Cellular component: GO:0016021 [integral to membrane] evidence: IEA
by
@meso_cacase at
DBCLS
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