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2024-04-26 17:40:15, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_001172412 8635 bp mRNA linear PRI 17-APR-2013
DEFINITION Homo sapiens VANGL planar cell polarity protein 1 (VANGL1),
transcript variant 2, mRNA.
ACCESSION NM_001172412
VERSION NM_001172412.1 GI:289547197
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 8635)
AUTHORS Anastas,J.N., Biechele,T.L., Robitaille,M., Muster,J.,
Allison,K.H., Angers,S. and Moon,R.T.
TITLE A protein complex of SCRIB, NOS1AP and VANGL1 regulates cell
polarity and migration, and is associated with breast cancer
progression
JOURNAL Oncogene 31 (32), 3696-3708 (2012)
PUBMED 22179838
REMARK GeneRIF: NOS1AP colocalizes with both SCRIB and VANGL1 along
cellular protrusions in metastatic breast cancer cells, but does
not colocalize with either SCRIB or VANGL1 at cell junctions in
normal breast cells
REFERENCE 2 (bases 1 to 8635)
AUTHORS Lee,S., Song,Y.A., Park,Y.L., Cho,S.B., Lee,W.S., Lee,J.H.,
Chung,I.J., Kim,K.K., Rew,J.S. and Joo,Y.E.
TITLE Expression of KITENIN in human colorectal cancer and its relation
to tumor behavior and progression
JOURNAL Pathol. Int. 61 (4), 210-220 (2011)
PUBMED 21418393
REMARK GeneRIF: KITENIN is associated with human colorectal cancer
progression including invasion and metastasis.
REFERENCE 3 (bases 1 to 8635)
AUTHORS Iliescu,A., Gravel,M., Horth,C., Apuzzo,S. and Gros,P.
TITLE Transmembrane topology of mammalian planar cell polarity protein
Vangl1
JOURNAL Biochemistry 50 (12), 2274-2282 (2011)
PUBMED 21291170
REMARK GeneRIF: a compact membrane-associated portion with very short
predicted extra- and intracellular loops, while the protein harbors
a large intracellular domain
REFERENCE 4 (bases 1 to 8635)
AUTHORS Iliescu,A., Gravel,M., Horth,C., Kibar,Z. and Gros,P.
TITLE Loss of membrane targeting of Vangl proteins causes neural tube
defects
JOURNAL Biochemistry 50 (5), 795-804 (2011)
PUBMED 21142127
REMARK GeneRIF: Loss of membrane targeting of Vangl1 and Vangl2 proteins
causes neural tube defects.
REFERENCE 5 (bases 1 to 8635)
AUTHORS Ryu,H.S., Park,Y.L., Park,S.J., Lee,J.H., Cho,S.B., Lee,W.S.,
Chung,I.J., Kim,K.K., Lee,K.H., Kweon,S.S. and Joo,Y.E.
TITLE KITENIN is associated with tumor progression in human gastric
cancer
JOURNAL Anticancer Res. 30 (9), 3479-3486 (2010)
PUBMED 20944126
REMARK GeneRIF: KITENIN plays an important role in human gastric cancer
progression by AP-1 activation.
REFERENCE 6 (bases 1 to 8635)
AUTHORS Kalabis,J., Rosenberg,I. and Podolsky,D.K.
TITLE Vangl1 protein acts as a downstream effector of intestinal trefoil
factor (ITF)/TFF3 signaling and regulates wound healing of
intestinal epithelium
JOURNAL J. Biol. Chem. 281 (10), 6434-6441 (2006)
PUBMED 16410243
REMARK GeneRIF: VANGL protein may serve as an effector mediating the
intestinal trefoil factor (ITF) healing response of the intestinal
mucosa.
REFERENCE 7 (bases 1 to 8635)
AUTHORS Doudney,K., Ybot-Gonzalez,P., Paternotte,C., Stevenson,R.E.,
Greene,N.D., Moore,G.E., Copp,A.J. and Stanier,P.
TITLE Analysis of the planar cell polarity gene Vangl2 and its
co-expressed paralogue Vangl1 in neural tube defect patients
JOURNAL Am. J. Med. Genet. A 136 (1), 90-92 (2005)
PUBMED 15952208
REMARK Erratum:[Am J Med Genet A. 2005 Nov 1;138(4):415]
REFERENCE 8 (bases 1 to 8635)
AUTHORS Lee,J.H., Park,S.R., Chay,K.O., Seo,Y.W., Kook,H., Ahn,K.Y.,
Kim,Y.J. and Kim,K.K.
TITLE KAI1 COOH-terminal interacting tetraspanin (KITENIN), a member of
the tetraspanin family, interacts with KAI1, a tumor metastasis
suppressor, and enhances metastasis of cancer
JOURNAL Cancer Res. 64 (12), 4235-4243 (2004)
PUBMED 15205336
REFERENCE 9 (bases 1 to 8635)
AUTHORS Yagyu,R., Hamamoto,R., Furukawa,Y., Okabe,H., Yamamura,T. and
Nakamura,Y.
TITLE Isolation and characterization of a novel human gene, VANGL1, as a
therapeutic target for hepatocellular carcinoma
JOURNAL Int. J. Oncol. 20 (6), 1173-1178 (2002)
PUBMED 12011995
REFERENCE 10 (bases 1 to 8635)
AUTHORS Katoh,M.
TITLE Molecular cloning and characterization of Strabismus 2 (STB2)
JOURNAL Int. J. Oncol. 20 (5), 993-998 (2002)
PUBMED 11956595
REMARK GeneRIF: Molecular cloning and characterization of Strabismus 2
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from AB057596.1 and AL450389.12.
Summary: This gene encodes a member of the tretraspanin family. The
encoded protein may be involved in mediating intestinal trefoil
factor induced wound healing in the intestinal mucosa. Mutations in
this gene are associated with neural tube defects. Alternate
splicing results in multiple transcript variants. [provided by
RefSeq, Feb 2010].
Transcript Variant: This variant (2) differs in the 5' UTR compared
to variant 1. Both variants 1 and 2 encode the same isoform (1).
Sequence Note: This RefSeq record was created from transcript and
genomic sequence data to make the sequence consistent with the
reference genome assembly. The genomic coordinates used for the
transcript record were based on transcript alignments.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AB057596.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
ERS025085 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-1845 AB057596.1 1-1845
1846-8635 AL450389.12 54859-61648
FEATURES Location/Qualifiers
source 1..8635
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="1"
/map="1p13.1"
gene 1..8635
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/note="VANGL planar cell polarity protein 1"
/db_xref="GeneID:81839"
/db_xref="HGNC:15512"
/db_xref="MIM:610132"
exon 1..78
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 47
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:12029798"
variation 67
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:377154941"
exon 79..286
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 101
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:181583261"
misc_feature 150..152
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/note="upstream in-frame stop codon"
variation 161
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:371591397"
variation 178
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:78368849"
variation 184
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:371100144"
variation 187
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:375618149"
variation 198
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:185393860"
CDS 216..1790
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/note="isoform 1 is encoded by transcript variant 2;
strabismus 2; KAI1 C-terminal interacting tetraspanin;
vang-like protein 1; van Gogh-like protein 1; loop-tail
protein 2 homolog; vang-like 1 (van gogh, Drosophila)"
/codon_start=1
/product="vang-like protein 1 isoform 1"
/protein_id="NP_001165883.1"
/db_xref="GI:289547198"
/db_xref="CCDS:CCDS883.1"
/db_xref="GeneID:81839"
/db_xref="HGNC:15512"
/db_xref="MIM:610132"
/translation="
MDTESTYSGYSYYSSHSKKSHRQGERTRERHKSPRNKDGRGSEKSVTIQPPTGEPLLGNDSTRTEEVQDDNWGETTTAITGTSEHSISQEDIARISKDMEDSVGLDCKRYLGLTVASFLGLLVFLTPIAFILLPPILWRDELEPCGTICEGLFISMAFKLLILLIGTWALFFRKRRADMPRVFVFRALLLVLIFLFVVSYWLFYGVRILDSRDRNYQGIVQYAVSLVDALLFIHYLAIVLLELRQLQPMFTLQVVRSTDGESRFYSLGHLSIQRAALVVLENYYKDFTIYNPNLLTASKFRAAKHMAGLKVYNVDGPSNNATGQSRAMIAAAARRRDSSHNELYYEEAEHERRVKKRKARLVVAVEEAFIHIQRLQAEEQQKAPGEVMDPREAAQAIFPSMARALQKYLRITRQQNYHSMESILQHLAFCITNGMTPKAFLERYLSAGPTLQYDKDRWLSTQWRLVSDEAVTNGLRDGIVFVLKCLDFSLVVNVKKIPFIILSEEFIDPKSHKFVLRLQSETSV
"
misc_feature 282..1787
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/note="Strabismus protein; Region: Strabismus; pfam06638"
/db_xref="CDD:148316"
misc_feature 567..629
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q8TAA9.1);
transmembrane region"
misc_feature 669..731
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q8TAA9.1);
transmembrane region"
misc_feature 762..824
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q8TAA9.1);
transmembrane region"
misc_feature 882..944
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q8TAA9.1);
transmembrane region"
variation 251
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:371629555"
variation 282
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:374630481"
exon 287..419
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 288
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:61734296"
variation 292
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143990097"
variation 313
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:78535164"
variation 315
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:372052239"
variation 318
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:375505955"
variation 319
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:369543626"
variation 329
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:201840785"
variation 366
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:200391853"
exon 420..1027
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 446
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:186509771"
variation 453
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:139472200"
variation 460
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:371028647"
variation 463
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:146695372"
variation 464
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:146495414"
STS 480..1479
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="Vangl1"
/db_xref="UniSTS:532467"
variation 484
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:374024136"
variation 489
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143196463"
variation 500
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:140451005"
variation 522
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:147048524"
variation 527
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:146723580"
variation 538
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:141673853"
variation 545
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:41275546"
variation 557
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:141525464"
variation 558
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:370292117"
variation 560
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:79828493"
variation 561
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:4839469"
variation 612
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:141482063"
variation 620
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:200325939"
variation 650
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:34768472"
variation 697
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:201871883"
variation 707
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:372165510"
variation 725
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:368383358"
variation 732
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:200535188"
variation 733
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:148341022"
variation 738
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:142594314"
variation 739
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201441696"
variation 752
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201493360"
variation 761
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143094973"
variation 791
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:146175997"
variation 841
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:201593132"
variation 855
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:143395094"
variation 864
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:373384296"
variation 896
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201698322"
variation 900
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143956994"
variation 929
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:376477305"
variation 930
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:121918218"
variation 935
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:200762200"
variation 959
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:148388816"
variation 967
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:201630629"
variation 980
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:368722418"
variation 981
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:199932833"
variation 995
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:373473714"
variation 1002
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:377435467"
variation 1022
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:200039235"
exon 1028..1161
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 1036
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:121918219"
variation 1053
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:370403671"
variation 1062
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:139744440"
variation 1083
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:145309218"
variation 1099
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:77983133"
variation 1100
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:201705477"
variation 1111
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:142348368"
variation 1117
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:373814054"
variation 1136
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/replace="t"
/db_xref="dbSNP:148965020"
variation 1154
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:367774972"
exon 1162..1294
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 1175
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:143754434"
variation 1192
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:141396495"
variation 1198
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:121918220"
variation 1216
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:368071458"
variation 1219
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:199526468"
variation 1228
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:74117015"
variation 1239
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:137860752"
variation 1255
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:34059106"
variation 1256
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:149279018"
variation 1265
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:147220426"
exon 1295..1529
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 1342
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:200389969"
variation 1381
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:151256445"
variation 1382
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:376015336"
variation 1387
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:140485834"
variation 1394
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:370067272"
variation 1404
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:373242373"
variation 1412
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:376174821"
variation 1447
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:369450463"
variation 1461
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:146596086"
variation 1473
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:189584852"
variation 1514
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:145137292"
variation 1515
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143016040"
exon 1530..8635
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/inference="alignment:Splign:1.39.8"
variation 1542
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:371428273"
variation 1555
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:148199776"
variation 1556
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:150326572"
STS 1593..1743
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="SHGC-75371"
/db_xref="UniSTS:73877"
variation 1659
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143622439"
variation 1685
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:199542978"
variation 1706..1707
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="c"
/db_xref="dbSNP:34903463"
variation 1706
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:200739468"
variation 1744
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:375459125"
variation 1749
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:140596381"
variation 1764
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:184905686"
variation 1765
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:148512517"
variation 1798
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:377233845"
variation 1813
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:202050152"
variation 1814..1815
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="a"
/db_xref="dbSNP:151052987"
variation 1835
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:376792729"
variation 1837
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:190792695"
variation 1873
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:3811013"
variation 1906
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:147518221"
variation 2007
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:41299565"
variation 2008
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:183938394"
variation 2023
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:188834002"
variation 2076
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:140372918"
variation 2090
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:41310108"
variation 2091
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:193075321"
variation 2103
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:3811012"
variation 2173
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:75277108"
variation 2206
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:3811011"
variation 2211
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:183137974"
variation 2266
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:187145225"
variation 2295
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:6700610"
variation 2484
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:41312690"
variation 2512
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:191916791"
variation 2712
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:142123586"
variation 2814
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:1140940"
variation 2833
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:150705915"
variation 2843
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:184219889"
variation 2898
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:189281695"
variation 2973
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:200424846"
variation 2973
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="t"
/db_xref="dbSNP:3841008"
variation 3033
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:192418098"
variation 3067
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:3204955"
variation 3186
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:185557879"
variation 3305
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:139030532"
variation 3335
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:117337677"
STS 3385..3576
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="RH26190"
/db_xref="UniSTS:84486"
variation 3415
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:376483138"
variation 3417
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:149888685"
STS 3439..3563
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="SHGC-75372"
/db_xref="UniSTS:59289"
variation 3442
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:146512242"
variation 3478
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:374184679"
variation 3531
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:199831777"
variation 3538
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:143344734"
variation 3539
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:3811010"
variation 3541
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:3811009"
variation 3562
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:114033235"
variation 3564..3565
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="ta"
/db_xref="dbSNP:374697813"
variation 3672
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:190492027"
STS 3705..3892
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="RH102185"
/db_xref="UniSTS:96519"
variation 3718
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:374222902"
variation 3799
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:181543393"
variation 3833
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:74117021"
variation 3911
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:184469057"
variation 3949
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:376302608"
variation 3976
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:375230119"
variation 3977
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:146730302"
polyA_signal 4079..4084
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
polyA_site 4102
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
variation 4119
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:188964296"
variation 4126
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:148944333"
variation 4141
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:12121158"
variation 4279
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:41299571"
variation 4326
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:377292403"
variation 4371
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:3811008"
variation 4434
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:372511903"
variation 4464
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:181039153"
variation 4655
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:114921471"
variation 4813
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:10923204"
variation 4867
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:185557143"
variation 4913
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:143712039"
variation 4940
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:148126079"
variation 4947
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:114196858"
variation 5046
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:374942113"
variation 5090
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:190894422"
variation 5125
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:61732172"
variation 5126
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:61732170"
variation 5167
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:367988126"
variation 5169
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:61797707"
variation 5171
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:61797708"
variation 5174
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:181008715"
variation 5199
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:140931431"
variation 5207
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:76160883"
variation 5286
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:4839472"
variation 5312
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:78917287"
variation 5334
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:74117023"
variation 5388
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:187286147"
variation 5443
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:146435279"
variation 5457
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:1128100"
variation 5532
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:115376031"
variation 5549..5552
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="aaac"
/db_xref="dbSNP:144395099"
STS 5590..5784
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="D1S3610"
/db_xref="UniSTS:66759"
variation 5609
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:139328749"
STS 5679..5853
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="RH70098"
/db_xref="UniSTS:69412"
variation 5735
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:192127758"
variation 5846
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:183004818"
variation 5855
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:187382548"
polyA_signal 5859..5864
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
variation 5878
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="t"
/db_xref="dbSNP:138659832"
polyA_site 5880
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
variation 5892
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:369489322"
variation 6004
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:112297385"
variation 6009
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:190660373"
variation 6036
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:147501140"
variation 6126
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:113030671"
variation 6137
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:138485279"
variation 6202
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:149626166"
variation 6268
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:17034226"
variation 6294
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:17034228"
variation 6420
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:58002309"
variation 6519
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:182580560"
variation 6521
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:144489409"
variation 6542
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:370211174"
variation 6578
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:148437823"
variation 6720
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:377056964"
variation 6743
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:369257328"
variation 6798
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:117347999"
variation 6825
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:188051509"
variation 7056
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:17034230"
variation 7057
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:75064936"
variation 7070
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:148451859"
variation 7076
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:192672583"
variation 7118
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:184529007"
variation 7158
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:10494179"
variation 7212
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="c"
/db_xref="dbSNP:189009112"
variation 7234
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:142497673"
variation 7256
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:192325588"
variation 7286..7289
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="actt"
/db_xref="dbSNP:111232035"
variation 7418
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:374395998"
variation 7423
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:4348723"
variation 7507
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:145945936"
variation 7532
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:371583408"
variation 7541
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:10801933"
variation 7594
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:76569370"
variation 7598
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:184708484"
variation 7631
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:4548441"
variation 7646
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:188827143"
variation 7785
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:4595366"
variation 7816
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:6428677"
variation 7918
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:181588954"
variation 7989
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="t"
/db_xref="dbSNP:3811007"
variation 8002
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:3811006"
variation 8027
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:184820374"
variation 8106
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="g"
/db_xref="dbSNP:139953261"
variation 8111
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:77318780"
variation 8203
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:189697580"
variation 8233
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="g"
/replace="t"
/db_xref="dbSNP:7414259"
STS 8387..8568
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/standard_name="RH99220"
/db_xref="UniSTS:85528"
variation 8399
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="c"
/replace="t"
/db_xref="dbSNP:375912178"
variation 8511
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace="a"
/replace="g"
/db_xref="dbSNP:17034249"
variation 8546..8547
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="c"
/db_xref="dbSNP:5777244"
variation 8552..8553
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="c"
/db_xref="dbSNP:369126863"
variation 8554..8555
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
/replace=""
/replace="c"
/db_xref="dbSNP:67579944"
polyA_signal 8614..8619
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
polyA_site 8632
/gene="VANGL1"
/gene_synonym="KITENIN; LPP2; STB2; STBM2"
ORIGIN
ctcgctcacaaaaaattgagccggccctggaggcctggggggcgagtccggttgcgcctcggagagcgcaacaggcagaatttgttcctgttgaagagtggctcctcttctaatttccagactccttgaggttttaggagtctggtaggtgaaattttctacctctaaggagaaacagtacctgctccttcctcaagcgcaagccctccattgctatggataccgaatccacttattctggatattcttactattcaagtcattcgaaaaaatctcacagacaaggggaaagaactagagagagacacaagtcaccccggaataaagacggcagagggtcagaaaagtctgtcaccattcaacctcccactggagagcccctgttgggaaatgattctactcggacagaggaagttcaggatgacaactggggagagaccaccacggccatcacaggcacctcggagcacagcatatcccaagaggacattgccaggatcagcaaggacatggaggacagcgtggggctggattgcaaacgctacctgggcctcaccgtcgcctcttttcttggacttctagttttcctcacccctattgccttcatccttttacctccgatcctgtggagggatgagctggagccttgtggcacaatttgtgaggggctctttatctccatggcattcaaactcctcattctgctcatagggacctgggcactttttttccgcaagcggagagctgacatgccacgggtgtttgtgtttcgtgcccttttgttggtcctcatctttctctttgtggtttcctattggcttttttacggggtccgcattttggactctcgggaccggaattaccagggcattgtgcaatatgcagtctcccttgtggatgccctcctcttcatccattacctggccatcgtcctgctggagctcaggcagctgcagcccatgttcacgctgcaggtggtccgctccaccgatggcgagtcccgcttctacagcctgggacacctgagtatccagcgagcagcattggtggtcctagaaaattactacaaagatttcaccatctataacccaaacctcctaacagcctccaaattccgagcagccaagcatatggccgggctgaaagtctacaatgtagatggccccagtaacaatgccactggccagtcccgggccatgattgctgcagctgctcggcgcagggactcaagccacaacgagttgtattatgaagaggccgaacatgaacggcgagtaaagaagcggaaagcaaggctggtggttgcagtggaagaggccttcatccacattcagcgtctccaggctgaggagcagcagaaagccccaggggaggtgatggaccctagggaggccgcccaggccattttcccctccatggccagggctctccagaagtacctgcgcatcacccggcagcagaactaccacagcatggagagcatcctgcagcacctggccttctgcatcaccaacggcatgacccccaaggccttcctagaacggtacctcagtgcgggccccaccctgcaatatgacaaggaccgctggctctctacacagtggaggcttgtcagtgatgaggctgtgactaatggattacgggatggaattgtgttcgtccttaagtgcttggacttcagcctcgtagtcaatgtgaagaaaattccattcatcatactctctgaagagttcatagaccccaaatctcacaaatttgtccttcgcttacagtctgagacatccgtttaaaagttctatatttgtggctttattaaaaaaaaaagaaaaatatatagagagatatatatctatgccagaggggtgtcttttttaaaaattcttcttcattgctgactgaaactggcagatgattgaccagtatcctttgaccatctgcactttatttggaaggaagcaggggctgtccaccctgaaaaagagtgactgatgacatctgacttttgtcgatgggacttctcaagaagccattccttggagcttctgttacagctgtaaaccaaagtggagctggtgcttcttgggagcctcgccttacaactaattcctgcctttcgtccagtaccaagtcccccgttgcttctggtcagcccacttgtagacttccaggggacacatctttattctgtttcaggaaaccagtcacgacacgtccacatatgtatttgtgtatgttaatgtccagtatcacatcacccatgaaagtcgtgggcagttcaggagatacctgccttcatctttgttctttgttgccttaggttcttcagagaaagatcacaacaaaaaatgtacactgtcgtttacagctattaagtgatttgattttgtttttttcccaaagagaaaacctacctgccctgtttctgatcccacccctctgctggcttgaagcaggtaaccctttcccagccctgcagctgcccacctggcctccatgccatcctgcccccacctggctggcagccctggctctccatgtgtgccctccggctctgtgtgaagcctcaagtcagtcccagcattgtttccatagggaagtgtggggtgcccagcaggtaaagcacagggagagagggcagtgggaatgccacctttaggctgcagcaggagccccacactgcccagttttcctccccactgttctacaccaaccaggggagactaacactgtgactctgggattggcaggtgcaacttggagccacttaatttcctggggacgtaagttcttcccaagcttagagcaagctgccctgccaaaggagaccaaaccatgccaaccacgctggcaactgctgctgtccagtccctgtgttttctgaccaccgtcactgtgcaactcatcgcctctgccacttaggaccaggaaagaggctggttttgctcccactcttagttgctgataaagtggggagaaggaaaatggacactctacagagtttggggaagggagagtagggagcccatcttgtccagaaagattcatctgtggtctgtctgttaaacacagctgatttcagtgggctttcccctggccctgggggagcagacactgactgggttgtgggcagaggagccatcctggcggagccctgctgcaggggagctccttcaggagccccatccggacctcttgcactgggctgcctttgcctccatttgccttcctgtatctgcaacaaaccttttaaaagtgttcactcttgctttttccagtatttcggtaatcagccatcttgctgtagtacaggatgacattgtcgaatgctctttgtatgtgtgcacacccccttactcccttactgcttcatacactccacaagtggtacagtattttgtgtcattgtaaaaatcaaaattggctttggatctttgtaatacacctgtacctgaaaaagtaaacaacattcttcaattactagccttcagcttgaaaagacatgctggagaagaaggaagggggaacccataggtgtggcgtggagccaagatgtactattcaactatgtgtttctgtttataaaaaacacataccatggaaccatggtgcttttgttcttagtttttgccgttagatcccttcaaactggaagttccttacaatatctttctcaggaaatattttgggaaatggggtaagagatggcaagtgtgagacgggctgtgtcagaggttgctacgtcatggatacagtgcagttccaagtgccataagtgtatgtacatatagttaataatgacactgttcatcaccattctaaaatactgttcttccaaccctatcttcaatgaccagtccagaaggggttaagctggattcatttgctctggcatgtgcattcccagcagggtgaagaaaggtttaaattaaagaatttattttctctctcccccttcctctttctcccagtctttgcataggagaatgttagacattcagaaattactgtttctgttttaaattgagtattgatttttttatattgactttgtattgagttctttttgaaagaataacaaaataaaatgcaggatctttgtaaagcctttgcactttcaacctctttatagcttgagttacttttgcagtgggaacaatgtaaatgacatttaaaagatttaaggtttcagaaagctgcatcccacaattgaacacaatgcatttttatttcaattcttggaactggtaggctattctttttaaaagggggtaaacttcgccctaaggctggtagaatgtatgttcacattatagtagacaggatttcatttgccttatatgtttatagattttttataattttcatcctacgttattaaaattagagcattgagtgttaaagaacttaatgaggagtctatatctgagattgctctcttccctggtgatgttttaactggtagataatttgttcttaaatatgtacttttgaagataggacagtttttatagtccatgaactgaatgttaaaaagttctgtatgcattctcagagaggattttaaagctatatagttcatccatcctttgcattatcaaaatgttaagtcaaatctgtaatactttggctaaaattcataaagtaagccctagagaaaatacttgaccaccaaatttttgcccaactatcatcacctcccttcccccgcctctgttcttgccttttgacatctacatggaagacaagttctttacagcaaatggtaagaggcaggtgacctggtgtgtttgctgtgttgtagttcattgcctggggcttgggactccttttttaatggagagactagctgtgcaggtgtgtgttggatagggataaagtgctcacccctgccctctctacagtagttggtggtagatttctctctcattttgcctcataatcactttcgagtgcatgtatttacctaagggctgtagctctgtgggatgctaccagcatattggactgacagaaattgattaccttgccactccaacctacgtactgagtgagtgctccagccactcagtgaaaccaacaaaagtgagtccttggtttaccttccaatctgggtcctgctgtgtaagtatccctaagtggggatgcatatttgtttgtgcgtttttatttccatatatgtgagcatttctctgagtgtattaccagacggatagcacatttatatgtcagacatcttaacatctgtgttatctgtagcaggtgtgtagctcagcagatacgtgtcattgtgtatatagctgagtgtgtgagggtgtctgtgtttctgcagtcccctgtgtttgagagatgacttaataaccctgtgttttgagaggtcgctctaaaccagtgacttttccctcccctgctttattcctttccctcactgacactggcttctcccgctagagtaaatggctttagcacagcactgtcttctggggagcctgctgtcctgcaggcaagtccattaaactctttcttgctttaggactctgaaaacagcaagaaacaaacaaacaaaggtcaagctctaagaaaattactgctcaaacttcactaccctggaagccttactagatatttcttaaggtaacttaaaaattgggctttatttttaaaaagtgataggttacttacagtagcacagaaatgttagcatatttatttaaatagtcctgcagcagagaccctgcgattgtaaagtgatttaagtatttctgggtagtgtttgtgatttacggatttgttactgaaaaacaaaaaaatcactactgtgaatttactactatgtaaccttgtggtcgtatttcattataaataaaataagaattgctcttctgcccaccgttcttgattggtattcagtgcagtagcgaaatgagatagtttagacactgttgaaataactgcattgagctttaaccaagtgtatgctcagaaaattcagttttggatcacattttgacaaaacatgttttggtcaaagaaaggaaaggctactaacacatttatcaggtaatgtatgtcacagtccgtgttccacccagccttgttatccccacattctttcaagataggagtcatcttggtttttcgggtgaaaaacggaaggtcagagaggaaggggcttgtccaaggtctcatgtctggttaacagaatttcaaactagatgtttgattctaacccctcagtccactgtaccttgaagtatggtctaaatgattcggcacttctggatgttgaggaaggacctagagacacatccttgaactagaacctggggtgagagttcattgggaggcaggatctcttctttcactttggatttacaccttgtcccttggaaagcttctccactatgctagcaaatatcttaggatatttgatggaaagaacttgagaatcccttctggaaaacccagcctttcagtgttaacacctgctgcaagacagggatgctgttgttctggcagcccccctttgcttttgcctggccccaccttctgctcccactctgctggcttgggcaagatgcgtgccttgggccttgggtgcagggaggcaggcaggggcttgacctggcctctctctggtgccatggcaacattatgccccaaacttcttccctggttggagtgagaggggctgtccacagccccatcctgtggggatctcaagccggagtccctggcctggcctccttgacgtaggtgttctcagcaagcagtttgcatcccaccgtctttctcacacttgcccccaagacttttgacagagcagacgtaaaacaggactcagaaaaccatttttctctgttcccatatgtagtaagttttgattcagttgtgcataaaccatagttttctgccctgctgtttgctttcaatggaagacagtaaagggaagatggtgctcacatctctccatgtgacatctcattaggaattaagatgcgatggattagaaatgtaaaacttcagaataaaattaaatttcagggctctataagtcccgttttcccaggtcctgttccgtttctacgtagataacccaatttgttttgtctatgaaataagcctctttagtgggttgttttagtctctccaacaaaagagcagattcctaaagccaggtgcagcactgtgaaaagtttctttcaatatggcaccaagactctaccatttatgtctctctcagcttacaaacatcagcgttttgtccttgtcatagtggaagaaagacacttactttaagctttggggacaaaggtgacaaaccccaggcttttatcttaaaagtgtctttggcacttcttttggcactgaaatggtatttgggaagcattatttgaatgtacagttgtttggttttgtatgtgcttatctttatctgagctttcacttgtagacatggccttttgttgtgaagttgctcatcatttaggagtgtttaattctaaaaagccttcagcctaagaaagcttcatctgtggggaccagagacttgttgctcagggagttagtgatgggacttgggcatctgatctgcaggtgacaagtttagttcaactgaagttgtagggaatttagacagttgcacatcattgccgttctaggggccttgtagaaagatgaaacagttgtttttcatttaccagcacctctcagttatagaggtaatggaacattcgcttacttttcatcatcattctttaaaaagggaacatacaaaaatctaaactatggcaataatttatttttataatagtttacggtaggctttaattaaatggcaaactcctctgggacccctaagttatggcgtgattagccaaatttgatttccaacagtcatttatggccataactattgcatagagtgcaggatgccagcaaagatgagggtgggggcagatactggctcagtgatttaactcacattatagatgaccccttcctcaacagaaatgctactgagagaaccagagaggcctgggccaggcaggtcttatttgagaggagattatttgataattgctttggttagaaggactttacatttcctgatttcaagtccagcaccaatttagaaagttcagagatgaaaccacctgtctttacctgacagagtcataacggtttgtgtaaaaatgtggtcagggaccttttttgttctttctgattagttaatactgtacattgtaaccaggaggggcagttttgccaaccagcctctgctcatggtcaccatatgtgtatgacaaggcctgagtgagttcctgcataaactgggtagtgggctcttttgacacatttgcaagcatgtaaatgaatgaatgacactaccagcaaccatctgtacaggtccatttacttacattcataaggtttatgctatgaaacttcttctcattgtgatgtcagtaacagagttagtgtctctgatggaatagtgtacctgtcacccaagttattttgttcctttttgggtcctccagtataatccccccctcatcccaattaactgtaaaatgttttacacatcacattttttatactgtaaacttggaaaataaactgaaatatcaaattg
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:81839 -> Molecular function: GO:0005515 [protein binding] evidence: IPI
GeneID:81839 -> Biological process: GO:0007275 [multicellular organismal development] evidence: IEA
GeneID:81839 -> Cellular component: GO:0016021 [integral to membrane] evidence: IEA
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