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2024-03-28 18:36:02, GGRNA : RefSeq release 60 (20130726)

LOCUS       NM_001164766           12778 bp    mRNA    linear   PRI 16-JUN-2013
DEFINITION  Homo sapiens zinc finger homeobox 3 (ZFHX3), transcript variant B,
            mRNA.
ACCESSION   NM_001164766
VERSION     NM_001164766.1  GI:258613986
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 12778)
  AUTHORS   Li,M., Zhao,D., Ma,G., Zhang,B., Fu,X., Zhu,Z., Fu,L., Sun,X. and
            Dong,J.T.
  TITLE     Upregulation of ATBF1 by progesterone-PR signaling and its
            functional implication in mammary epithelial cells
  JOURNAL   Biochem. Biophys. Res. Commun. 430 (1), 358-363 (2013)
   PUBMED   23159610
  REMARK    GeneRIF: These findings suggest that ATBF1 plays a crucial role in
            the Progesterone-progesterone receptors signaling pathway in
            mammary epithelial cells.
REFERENCE   2  (bases 1 to 12778)
  AUTHORS   Bevan,S., Traylor,M., Adib-Samii,P., Malik,R., Paul,N.L.,
            Jackson,C., Farrall,M., Rothwell,P.M., Sudlow,C., Dichgans,M. and
            Markus,H.S.
  TITLE     Genetic heritability of ischemic stroke and the contribution of
            previously reported candidate gene and genomewide associations
  JOURNAL   Stroke 43 (12), 3161-3167 (2012)
   PUBMED   23042660
  REMARK    GeneRIF: 3 loci from related cardiovascular genomewide studies were
            significant: PHACTR1 in large-vessel disease (P=2.63e(-6)), PITX2
            in cardioembolic stroke (P=4.78e(-8)), and ZFHX3 in cardioembolic
            stroke (P=5.50e(-7)).
REFERENCE   3  (bases 1 to 12778)
  AUTHORS   Li,M., Fu,X., Ma,G., Sun,X., Dong,X., Nagy,T., Xing,C., Li,J. and
            Dong,J.T.
  TITLE     Atbf1 regulates pubertal mammary gland development likely by
            inhibiting the pro-proliferative function of estrogen-ER signaling
  JOURNAL   PLoS ONE 7 (12), E51283 (2012)
   PUBMED   23251482
  REMARK    GeneRIF: findings indicate that Atbf1 plays a role in the
            development of pubertal mammary gland likely by modulating the
            function of estrogen-ER signaling in luminal cells and by
            modulating gene expression in basal cells
REFERENCE   4  (bases 1 to 12778)
  AUTHORS   Minamiya,Y., Saito,H., Ito,M., Imai,K., Konno,H., Takahashi,N.,
            Motoyama,S. and Ogawa,J.
  TITLE     Suppression of Zinc Finger Homeobox 3 expression in tumor cells
            decreases the survival rate among non-small cell lung cancer
            patients
  JOURNAL   Cancer Biomark 11 (4), 139-146 (2012)
   PUBMED   23144151
  REMARK    GeneRIF: Suppression of ZFHX3 expression in tumor cells decreases
            the survival rate among patients with NSCLC.
REFERENCE   5  (bases 1 to 12778)
  AUTHORS   Loftus,B.J., Kim,U.J., Sneddon,V.P., Kalush,F., Brandon,R.,
            Fuhrmann,J., Mason,T., Crosby,M.L., Barnstead,M., Cronin,L.,
            Deslattes Mays,A., Cao,Y., Xu,R.X., Kang,H.L., Mitchell,S.,
            Eichler,E.E., Harris,P.C., Venter,J.C. and Adams,M.D.
  TITLE     Genome duplications and other features in 12 Mb of DNA sequence
            from human chromosome 16p and 16q
  JOURNAL   Genomics 60 (3), 295-308 (1999)
   PUBMED   10493829
REFERENCE   6  (bases 1 to 12778)
  AUTHORS   Kaspar,P., Dvorakova,M., Kralova,J., Pajer,P., Kozmik,Z. and
            Dvorak,M.
  TITLE     Myb-interacting protein, ATBF1, represses transcriptional activity
            of Myb oncoprotein
  JOURNAL   J. Biol. Chem. 274 (20), 14422-14428 (1999)
   PUBMED   10318867
REFERENCE   7  (bases 1 to 12778)
  AUTHORS   Bedford,M.T., Chan,D.C. and Leder,P.
  TITLE     FBP WW domains and the Abl SH3 domain bind to a specific class of
            proline-rich ligands
  JOURNAL   EMBO J. 16 (9), 2376-2383 (1997)
   PUBMED   9171351
REFERENCE   8  (bases 1 to 12778)
  AUTHORS   Miura,Y., Tam,T., Ido,A., Morinaga,T., Miki,T., Hashimoto,T. and
            Tamaoki,T.
  TITLE     Cloning and characterization of an ATBF1 isoform that expresses in
            a neuronal differentiation-dependent manner
  JOURNAL   J. Biol. Chem. 270 (45), 26840-26848 (1995)
   PUBMED   7592926
REFERENCE   9  (bases 1 to 12778)
  AUTHORS   Yamada,K., Miura,Y., Scheidl,T., Yoshida,M.C. and Tamaoki,T.
  TITLE     Assignment of the human ATBF1 transcription factor gene to
            chromosome 16q22.3-q23.1
  JOURNAL   Genomics 29 (2), 552-553 (1995)
   PUBMED   8666409
REFERENCE   10 (bases 1 to 12778)
  AUTHORS   Morinaga,T., Yasuda,H., Hashimoto,T., Higashio,K. and Tamaoki,T.
  TITLE     A human alpha-fetoprotein enhancer-binding protein, ATBF1, contains
            four homeodomains and seventeen zinc fingers
  JOURNAL   Mol. Cell. Biol. 11 (12), 6041-6049 (1991)
   PUBMED   1719379
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence was derived from D10250.1, AC004943.2 and
            L32832.1.
            
            Summary: This gene encodes a transcription factor with multiple
            homeodomains and zinc finger motifs, and regulates myogenic and
            neuronal differentiation. The encoded protein suppresses expression
            of the alpha-fetoprotein gene by binding to an AT-rich enhancer
            motif. The protein has also been shown to negatively regulate
            c-Myb, and transactivate the cell cycle inhibitor cyclin-dependent
            kinase inhibitor 1A (also known as p21CIP1). This gene is reported
            to function as a tumor suppressor in several cancers, and sequence
            variants of this gene are also associated with atrial fibrillation.
            Multiple transcript variants expressed from alternate promoters and
            encoding different isoforms have been found for this gene.
            [provided by RefSeq, Sep 2009].
            
            Transcript Variant: This variant (B) represents use of an alternate
            promoter and 5' UTR, lacks an alternate coding exon, and uses a
            downstream start codon, compared to variant A. The resulting
            isoform (B) has a shorter N-terminus, compared to isoform A.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: D10250.1 [ECO:0000332]
            RNAseq introns              :: mixed/partial sample support
                                           ERS025084 [ECO:0000350]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1832              D10250.1           1-1832
            1833-1833           AC004943.2         68245-68245
            1834-8607           L32832.1           5120-11893
            8608-12778          AC004943.2         79426-83596
FEATURES             Location/Qualifiers
     source          1..12778
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="16"
                     /map="16q22.3"
     gene            1..12778
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /note="zinc finger homeobox 3"
                     /db_xref="GeneID:463"
                     /db_xref="HGNC:777"
                     /db_xref="MIM:104155"
     exon            1..106
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /inference="alignment:Splign:1.39.8"
     misc_feature    28..30
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /note="upstream in-frame stop codon"
     exon            107..603
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /inference="alignment:Splign:1.39.8"
     CDS             130..8499
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /note="isoform B is encoded by transcript variant B; AT
                     motif-binding factor 1; AT-binding transcription factor 1;
                     zinc finger homeobox protein 3; alpha-fetoprotein enhancer
                     binding protein; ZFH-3; zinc finger homeodomain protein 3;
                     alpha-fetoprotein enhancer-binding protein"
                     /codon_start=1
                     /product="zinc finger homeobox protein 3 isoform B"
                     /protein_id="NP_001158238.1"
                     /db_xref="GI:258613987"
                     /db_xref="CCDS:CCDS54035.1"
                     /db_xref="GeneID:463"
                     /db_xref="HGNC:777"
                     /db_xref="MIM:104155"
                     /translation="
MRLGGGQLVSEELMNLGESFIQTNDPSLKLFQCAVCNKFTTDNLDMLGLHMNVERSLSEDEWKAVMGDSYQCKLCRYNTQLKANFQLHCKTDKHVQKYQLVAHIKEGGKANEWRLKCVAIGNPVHLKCNACDYYTNSLEKLRLHTVNSRHEASLKLYKHLQQHESGVEGESCYYHCVLCNYSTKAKLNLIQHVRSMKHQRSESLRKLQRLQKGLPEEDEDLGQIFTIRRCPSTDPEEAIEDVEGPSETAADPEELAKDQEGGASSSQAEKELTDSPATSKRISFPGSSESPLSSKRPKTAEEIKPEQMYQCPYCKYSNADVNRLRVHAMTQHSVQPMLRCPLCQDMLNNKIHLQLHLTHLHSVAPDCVEKLIMTVTTPEMVMPSSMFLPAAVPDRDGNSNLEEAGKQPETSEDLGKNILPSASTEQSGDLKPSPADPGSVREDSGFICWKKGCNQVFKTSAALQTHFNEVHAKRPQLPVSDRHVYKYRCNQCSLAFKTIEKLQLHSQYHVIRAATMCCLCQRSFRTFQALKKHLETSHLELSEADIQQLYGGLLANGDLLAMGDPTLAEDHTIIVEEDKEEESDLEDKQSPTGSDSGSVQEDSGSEPKRALPFRKGPNFTMEKFLDPSRPYKCTVCKESFTQKNILLVHYNSVSHLHKLKRALQESATGQPEPTSSPDNKPFKCNTCNVAYSQSSTLEIHMRSVLHQTKARAAKLEAASGSSNGTGNSSSISLSSSTPSPVSTSGSNTFTTSNPSSAGIAPSSNLLSQVPTESVGMPPLGNPIGANIASPSEPKEANRKKLADMIASRQQQQQQQQQQQQQQQQQQQAQTLAQAQAQVQAHLQQELQQQAALIQSQLFNPTLLPHFPMTTETLLQLQQQQHLLFPFYIPSAEFQLNPEVSLPVTSGALTLTGTGPGLLEDLKAQVQVPQQSHQQILPQQQQNQLSIAQSHSALLQPSQHPEKKNKLVIKEKEKESQRERDSAEGGEGNTGPKETLPDALKAKEKKELAPGGGSEPSMLPPRIASDARGNATKALLENFGFELVIQYNENKQKVQKKNGKTDQGENLEKLECDSCGKLFSNILILKSHQEHVHQNYFPFKQLERFAKQYRDHYDKLYPLRPQTPEPPPPPPPPPPPPLPAAPPQPASTPAIPASAPPITSPTIAPAQPSVPLTQLSMPMELPIFSPLMMQTMPLQTLPAQLPPQLGPVEPLPADLAQLYQHQLNPTLLQQQNKRPRTRITDDQLRVLRQYFDINNSPSEEQIKEMADKSGLPQKVIKHWFRNTLFKERQRNKDSPYNFSNPPITSLEELKIDSRPPSPEPPKQEYWGSKRSSRTRFTDYQLRVLQDFFDANAYPKDDEFEQLSNLLNLPTRVIVVWFQNARQKARKNYENQGEGKDGERRELTNDRYIRTSNLNYQCKKCSLVFQRIFDLIKHQKKLCYKDEDEEGQDDSQNEDSMDAMEILTPTSSSCSTPMPSQAYSAPAPSANNTASSAFLQLTAEAEELATFNSKTEAGDEKPKLAEAPSAQPNQTQEKQGQPKPELQQQEQPEQKTNTPQQKLPQLVSLPSLPQPPPQAPPPQCPLPQSSPSPSQLSHLPLKPLHTSTPQQLANLPPQLIPYQCDQCKLAFPSFEHWQEHQQLHFLSAQNQFIHPQFLDRSLDMPFMLFDPSNPLLASQLLSGAIPQIPASSATSPSTPTSTMNTLKRKLEEKASASPGENDSGTGGEEPQRDKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVWFQNTRARERKGQFRAVGPAQAHRRCPFCRALFKAKTALEAHIRSRHWHEAKRAGYNLTLSAMLLDCDGGLQMKGDIFDGTSFSHLPPSSSDGQGVPLSPVSKTMELSPRTLLSPSSIKVEGIEDFESPSMSSVNLNFDQTKLDNDDCSSVNTAITDTTTGDEGNADNDSATGIATETKSSSAPNEGLTKAAMMAMSEYEDRLSSGLVSPAPSFYSKEYDNEGTVDYSETSSLADPCSPSPGASGSAGKSGDSGDRPGQKRFRTQMTNLQLKVLKSCFNDYRTPTMLECEVLGNDIGLPKRVVQVWFQNARAKEKKSKLSMAKHFGINQTSYEGPKTECTLCGIKYSARLSVRDHIFSQQHISKVKDTIGSQLDKEKEYFDPATVRQLMAQQELDRIKKANEVLGLAAQQQGMFDNTPLQALNLPTAYPALQGIPPVLLPGLNSPSLPGFTPSNTALTSPKPNLMGLPSTTVPSPGLPTSGLPNKPSSASLSSPTPAQATMAMGPQQPPQQQQQQQQPQVQQPPPPPAAQPPPTPQLPLQQQQQRKDKDSEKVKEKEKAHKGKGEPLPVPKKEKGEAPTATAATISAPLPTMEYAVDPAQLQALQAALTSDPTALLTSQFLPYFVPGFSPYYAPQIPGALQSGYLQPMYGMEGLFPYSPALSQALMGLSPGSLLQQYQQYQQSLQEAIQQQQQRQLQQQQQQKVQQQQPKASQTPVPPGAPSPDKDPAKESPKPEEQKNTPREVSPLLPKLPEEPEAESKSADSLYDPFIVPKVQYKLVCRKCQAGFSDEEAARSHLKSLCFFGQSVVNLQEMVLHVPTGGGGGGSGGGGGGGGGGGGGGSYHCLACESALCGEEALSQHLESALHKHRTITRAARNAKEHPSLLPHSACFPDPSTASTSQSAAHSNDSPPPPSAAAPSSASPHASRKSWPQVVSRASAAKPPSFPPLSSSSTVTSSSCSTSGVQPSMPTDDYSEESDTDLSQKSDGPASPVEGPKDPSCPKDSGLTSVGTDTFRL
"
     misc_feature    3823..3999
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /note="Homeodomain;  DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; Region:
                     homeodomain; cd00086"
                     /db_xref="CDD:28970"
     misc_feature    order(3823..3837,3841..3843,3892..3894,3910..3912,
                     3949..3951,3955..3960,3967..3972,3976..3984,3988..3993)
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:28970"
     misc_feature    order(3829..3831,3838..3840,3958..3960,3967..3972,
                     3979..3981)
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:28970"
     misc_feature    4114..4287
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /note="Homeodomain;  DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; Region:
                     homeodomain; cd00086"
                     /db_xref="CDD:28970"
     misc_feature    order(4114..4128,4132..4134,4183..4185,4201..4203,
                     4240..4242,4246..4251,4258..4263,4267..4275,4279..4284)
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:28970"
     misc_feature    order(4120..4122,4129..4131,4249..4251,4258..4263,
                     4270..4272)
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:28970"
     misc_feature    5218..5601
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /note="Homeodomain-containing transcription factor
                     [Transcription]; Region: COG5576"
                     /db_xref="CDD:35135"
     misc_feature    5311..5487
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /note="Homeodomain;  DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; Region:
                     homeodomain; cd00086"
                     /db_xref="CDD:28970"
     misc_feature    order(5311..5325,5329..5331,5380..5382,5398..5400,
                     5437..5439,5443..5448,5455..5460,5464..5472,5476..5481)
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:28970"
     misc_feature    order(5317..5319,5326..5328,5446..5448,5455..5460,
                     5467..5469)
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:28970"
     misc_feature    6226..6402
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /note="Homeodomain;  DNA binding domains involved in the
                     transcriptional regulation of key eukaryotic developmental
                     processes; may bind to DNA as monomers or as homo- and/or
                     heterodimers, in a sequence-specific manner; Region:
                     homeodomain; cd00086"
                     /db_xref="CDD:28970"
     misc_feature    order(6226..6240,6244..6246,6295..6297,6313..6315,
                     6352..6354,6358..6363,6370..6375,6379..6387,6391..6396)
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:28970"
     misc_feature    order(6232..6234,6241..6243,6361..6363,6370..6375,
                     6382..6384)
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:28970"
     variation       303
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:2228200"
     variation       376
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:2213978"
     exon            604..835
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /inference="alignment:Splign:1.39.8"
     exon            836..916
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /inference="alignment:Splign:1.39.8"
     exon            917..1050
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /inference="alignment:Splign:1.39.8"
     exon            1051..1251
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /inference="alignment:Splign:1.39.8"
     exon            1252..1354
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /inference="alignment:Splign:1.39.8"
     exon            1355..6814
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /inference="alignment:Splign:1.39.8"
     variation       1833
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:740178"
     variation       2316
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:2229290"
     STS             2797..2994
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /standard_name="RH65127"
                     /db_xref="UniSTS:37848"
     variation       5565
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:2229286"
     variation       5634
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:2229287"
     variation       5664
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:2229288"
     variation       5703
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:2229289"
     exon            6815..12778
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /inference="alignment:Splign:1.39.8"
     variation       7266
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:2228199"
     STS             7763..8667
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /standard_name="ATBF1_4388"
                     /db_xref="UniSTS:463552"
     variation       10596..10597
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /replace=""
                     /replace="t"
                     /db_xref="dbSNP:3841241"
     variation       11842
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:3193941"
     variation       11980
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:3812983"
     variation       12479
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:1053410"
     variation       12655
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:1053412"
     polyA_signal    12755..12760
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
     polyA_site      12778
                     /gene="ZFHX3"
                     /gene_synonym="ATBF1; ATBT; ZNF927"
ORIGIN      
cgcggcccgagcgcctcttttcgggattaaaagcgccgccagctcccgccgccgccgccgtcgccagcagcgccgctgcagccgccgccgccggagaagcaaccgctgggcggtgagatccccctagacatgcggctcgggggcgggcagctggtgtcagaggagctgatgaacctgggcgagagcttcatccagaccaacgacccgtcgctgaagctcttccagtgcgccgtctgcaacaagttcacgacggacaacctggacatgctgggcctgcacatgaacgtggagcgcagcctgtcggaggacgagtggaaggcggtgatgggggactcataccagtgcaagctctgccgctacaacacccagctcaaggccaacttccagctgcactgcaagacagacaagcacgtgcagaagtaccagctggtggcccacatcaaggagggcggcaaggccaacgagtggaggctcaagtgtgtggccatcggcaaccccgtgcacctcaagtgcaacgcctgtgactactacaccaacagcctggagaagctgcggctgcacacggtcaactccaggcacgaggccagcctgaagttgtacaagcacctgcagcagcatgagagtggtgtagaaggtgagagctgctactaccactgcgttctgtgcaactactccaccaaggccaagctcaacctcatccagcatgtgcgctccatgaagcaccagcgaagcgagagcctgcgaaagctgcagcggctgcagaagggccttccagaggaggacgaggacctggggcagatcttcaccatccgcaggtgcccctccacggacccagaagaagccattgaagatgttgaaggacccagtgaaacagctgctgatccagaggagcttgctaaggaccaagagggcggagcatcgtccagccaagcagagaaggagctgacagattctcctgcaacctccaaacgcatctccttcccaggtagctcagagtctcccctctcttcgaagcgaccaaaaacagctgaggagatcaaaccggagcagatgtaccagtgtccctactgcaagtacagtaatgccgatgtcaaccggctccgggtgcatgccatgacgcagcactcggtgcaacccatgcttcgctgccccctgtgccaggacatgctcaacaacaagatccacctccagctgcacctcacccacctccacagcgtggcacctgactgcgtggagaagctcattatgacggtgaccacccctgagatggtgatgccaagcagcatgttcctcccagcagctgttccagatcgagatgggaattccaatttggaagaggcaggaaagcagcctgaaacctcagaggatctgggaaagaacatcttgccatccgcaagcacagagcaaagcggagatttgaaaccatcccctgctgacccaggctctgtgagagaagactcaggcttcatctgctggaagaaggggtgcaaccaggttttcaaaacttctgctgcccttcagacgcattttaatgaagtgcatgccaagaggcctcagctgccggtgtcagatcgccatgtgtacaagtaccgctgtaatcagtgtagcctggccttcaagaccattgaaaagttgcagctccattctcagtaccatgtgatcagagctgccaccatgtgctgtctttgtcagcgcagtttccgaactttccaggctctgaagaagcaccttgagacaagccacctggagctgagtgaggctgacatccaacagctttatggtggcctgctggccaatggggacctcctggcaatgggagaccccactctggcagaggaccataccataattgttgaggaagacaaggaggaagagagtgacttggaagataaacagagcccaacgggcagtgactctgggtcagtacaagaagactcgggctcagagccaaagagagctctgcctttcagaaaaggtcccaattttactatggaaaagttcctagacccttctcgcccttacaagtgtaccgtctgcaaggaatctttcactcaaaagaatatcctgctagtacactacaattctgtctcccacctgcataagttaaagagagcccttcaagaatcagcaaccggtcagccagaacccaccagcagcccagacaacaaaccttttaagtgtaacacttgtaatgtggcctacagccagagttccactctggagatccatatgaggtctgtgttacatcaaaccaaggcccgggcagccaagctggaggctgcaagtggcagcagcaatgggactgggaacagcagcagtatttccttgagctcctccacgccaagtcctgtgagcaccagtggcagtaacacctttaccacctccaatccaagcagtgctggcattgctccaagctctaacttactaagccaagtgcccactgagagtgtagggatgccacccctggggaatcctattggtgccaacattgcttccccttcagagcccaaagaggccaatcggaagaaactggcagatatgattgcatccaggcagcagcaacaacagcagcagcaacagcaacaacaacaacaacaacaacaacaacaagcacaaacgctggcccaggcccaggctcaagttcaagctcacctgcagcaggagctgcagcaacaggctgccctgatccagtctcagctgtttaaccccaccctccttcctcacttccccatgacaactgagaccctgctgcaactacagcagcagcagcacctcctcttccctttctacatccccagtgctgagttccagcttaaccccgaggtgagcttgccagtgaccagtggggcactgacactgactgggacaggcccaggcctgctggaagatctgaaggctcaggttcaggtcccacagcagagccatcagcagatcttgccgcagcagcagcagaaccaactctctatagcccagagtcactctgccctccttcagccaagccagcaccccgaaaagaagaacaaattggtcatcaaagaaaaggaaaaagaaagccagagagagagggacagcgccgaggggggagagggcaacaccggtccgaaggaaacactgccagatgccttgaaggccaaagagaagaaagagttggcaccagggggtggttctgagccttccatgctccctccacgcattgcttcagatgccagagggaacgccaccaaggccctgctggagaactttggctttgagttggtcatccagtataatgagaacaagcagaaggtgcagaaaaagaatgggaagactgaccagggagagaacctggaaaagctcgagtgtgactcctgcggcaagttgttttccaacatcttgattttaaagagtcatcaagagcacgttcatcagaattactttcctttcaaacagctcgagaggtttgccaaacagtacagagaccactacgataaactgtacccactgaggccccagaccccagagccaccaccacctccccctccaccccctccacccccacttccggcagcgccgcctcagccggcgtccacaccagccatccccgcatcagccccacccatcacctcacctacaattgcaccggcccagccatcagtgccgctcacccagctctccatgccgatggagctgcccatcttctcgccgctgatgatgcagacgatgccgctgcagaccttgccggctcagctacccccgcagctgggacctgtggagcctctgcctgcggacctggcccaactctaccagcatcagctcaatccaaccctgctccagcagcagaacaagaggcctcgcaccaggatcacagatgatcagctccgagtcttgcggcaatattttgacattaacaactcccccagtgaagagcaaataaaagagatggcagacaagtccgggttgccccagaaagtgatcaagcactggttcaggaacactctcttcaaagagaggcagcgtaacaaggactccccttacaacttcagtaatcctcctatcaccagcctggaggagctcaagattgactcccggcccccttcgccggaacctccaaagcaggagtactggggaagcaagaggtcttcaagaacaaggtttacggactaccagctgagggtcttacaggacttcttcgatgccaatgcttacccaaaggatgatgaatttgagcaactctctaatttactgaaccttccaacccgagtgatagtggtgtggtttcagaatgcccgacagaaggccaggaagaattatgagaatcagggagagggcaaagatggagagcggcgtgagcttacaaatgatagatacattcgaacaagcaacttgaactaccagtgcaaaaaatgtagcctggtgtttcagcgcatctttgatctcatcaagcaccagaagaagctgtgttacaaggatgaggatgaggaggggcaggacgacagccaaaatgaggattccatggatgccatggaaatcctgacgcctaccagctcatcctgcagtaccccgatgccctcacaggcttacagcgccccagcaccatcagccaataatacagcttcctccgctttcttgcagcttacagcggaggctgaggaactggccaccttcaattcaaaaacagaggcaggcgatgagaaaccaaagctggcggaagctcccagtgcacagccaaaccaaacccaagaaaagcaaggacaaccaaagccagagctgcagcagcaagagcagcccgagcagaagaccaacactccccagcagaagctcccccagctggtgtccctgccttcgttgccacagcctcctccacaagcgccccctccacagtgccccttaccccagtcgagccccagtccttcccagctctcccacctgcccctcaagcccctccacacatcaactcctcaacagctcgcaaacctacctcctcagctaatcccctaccagtgtgaccagtgtaagttggcatttccgtcatttgagcactggcaggagcatcagcagctccacttcctgagcgcgcagaaccagttcatccacccccagtttttggacaggtccctggatatgcctttcatgctctttgatcccagtaacccactcctggccagccagctgctctctggggccatacctcagattccagcaagctcagccacttctccttcaactccaacctccacaatgaacactctcaagaggaagctggaggaaaaggccagtgcaagccctggcgaaaacgacagtgggacaggaggagaagagcctcagagagacaagcgtttgagaacaaccatcacaccggaacaactagaaattctctaccagaagtatctactggattccaatccgactcgaaagatgttggatcacattgcacacgaggtgggcttgaagaaacgtgtggtacaagtctggtttcagaacacccgagctcgggaaaggaaaggacagttccgggctgtaggcccagcgcaggcccacaggagatgccctttttgcagagcgctcttcaaagccaagactgctcttgaggctcatatccggtcccgtcactggcatgaagccaagagagctggctacaacctaactctgtctgcgatgctcttagactgtgatgggggactccagatgaaaggagatatttttgacggaactagcttttcccacctacccccaagcagtagtgatggtcagggtgtccccctctcacctgtgagtaaaaccatggaattgtcacccagaactcttctaagcccttcctccattaaggtggaagggattgaagactttgaaagcccctccatgtcctcagttaatctaaactttgaccaaactaagctggacaacgatgactgttcctctgtcaacacagcaatcacagataccacaactggagacgagggcaacgcagataacgacagtgcaacgggaatagcaactgaaaccaaatcctcttctgcacccaacgaagggttgaccaaagcggccatgatggcaatgtctgagtatgaagatcggttgtcatctggtctggtcagcccggccccgagcttttatagcaaggaatatgacaatgaaggtacagtggactacagtgaaacctcaagccttgcagatccctgctccccgagtcctggtgcgagtggatctgcaggcaaatctggtgacagcggagatcggcctgggcagaaacgttttcgcactcaaatgaccaatctgcagctgaaggtcctcaagtcatgctttaatgactacaggacacccactatgctagaatgtgaggtcctgggcaatgacattggactgccaaagagagtcgttcaggtctggttccagaatgcccgggcaaaagaaaagaagtccaagttaagcatggccaagcattttggtataaaccaaacgagttatgagggacccaaaacagagtgcactttgtgtggcatcaagtacagcgctcggctgtctgtacgtgaccatatcttttcccaacagcatatctccaaagttaaagacaccattggaagccagctggacaaggagaaagaatactttgacccagccaccgtacgtcagttgatggctcaacaagagttggaccggattaaaaaggccaacgaggtccttggactggcagctcagcagcaagggatgtttgacaacacccctcttcaggcccttaaccttcctacagcatatccagcgctccagggcattcctcctgtgttgctcccgggcctcaacagcccctccttgccaggctttactccatccaacacagctttaacgtctcctaagccgaacttgatgggtctgcccagcacaactgttccttcccctggcctccccacttctggattaccaaataaaccgtcctcagcgtcgctgagctccccaaccccagcacaagccacgatggcgatgggccctcagcaacccccccagcagcagcagcagcagcagcaaccacaggtgcagcagcctcccccgccgccagcagcccagccgccacccacaccacagctcccactgcaacagcagcagcaacgcaaggacaaagacagtgagaaagtaaaggagaaggaaaaggcacacaaagggaaaggggaacccctgcctgtccccaagaaggagaaaggagaggcccccacggcaactgcagccacgatctcagccccgctgcccaccatggagtatgcggtagaccctgcacagctgcaggccctgcaggccgcgttgacttcggaccccacagcattgctcacaagccagttccttccttactttgtaccaggcttttctccttattatgctccccagatccctggcgccctgcagagcgggtacctgcagcctatgtatggcatggaaggcctgttcccctacagccctgcactgtcgcaggccctgatggggctgtccccaggctccctactgcagcagtaccagcaataccagcagagtctgcaggaggcaattcagcagcagcagcagcggcaactacagcagcagcagcagcaaaaagtgcagcagcagcagcccaaagcaagccaaaccccagtcccccccggggctccttccccagacaaagaccctgccaaagaatcccccaaaccagaagaacagaaaaacaccccccgtgaggtgtcccccctcctgccgaaactccctgaagagccagaagcagaaagcaaaagtgcggactccctctacgaccccttcattgttccaaaggtgcagtacaagttggtctgccgcaagtgccaggcgggcttcagcgacgaggaggcagcgaggagccacctgaagtccctctgcttcttcggccagtctgtggtgaacctgcaagagatggtgcttcacgtccccaccggcggcggcggcggtggcagtggcggcggcggcggcggtggcggcggcggcggcggcggcggctcgtaccactgcctggcgtgcgagagcgcgctctgtggggaggaagctctgagtcaacatctcgagtcggccttgcacaaacacagaacaatcacgagagcagcaagaaacgccaaagagcaccctagtttattacctcactctgcctgcttccccgatcctagcaccgcatctacctcgcagtctgccgctcactcaaacgacagcccccctcccccgtcggccgccgccccctcctccgcttccccccacgcctccaggaagtcttggccgcaagtggtctcccgggcttcggcagcgaagcccccttcttttcctcctctctcctcatcttcaacggttacctcaagttcatgcagcacctcaggggttcagccctcgatgccaacagacgactattcggaggagtctgacacggatctcagccaaaagtccgacggaccggcgagcccggtggagggtcccaaagaccccagctgccccaaggacagtggtctgaccagtgtaggaacggacaccttcagattgtaagctttgaagatgaacaatacaaacaaatgaatttaaatacaaaaattaataacaaaccaatttcaaaaatagactaactgcaattccaaagcttctaaccaaaaaacaaaaaaaaaaaaaaaaagaaaaaaaagaaaaagcgtgggttgttttcccatatacctatctatgccggtgattttacattcttgtctttttcttttcttttaatattaaaaaaaaaaaaaaagccctaaccctgttacattgtgtccttttgaaggtactattggtctgggaaacagaagtccgcagggcctccctaatgtctttggagcttaaaccccttgtatatttgccccttttcaataaacgccccacgctgatagcacagaggagcccggcatgcactgtatgggaaagcagtccaccttgttacagttttaaatttcttgctatcttagcattcagataccaatggcttgctaaaagaaaaaaagaaatgtaatgtctttttattctcaggtcaatcgctcacactttgttttcagaatcattgttttatatattattgttttttcagtttttttttttttttttgttccagaaaagattttttgttttgttaacttaaaaatgggcagaaagtattcaagaaaaacaatgtgaactgctttagctttctggggatttttaaggatagcttttctgctgaagccaatttcaaggggaaaagttaagcactcccactttcaaaaaaaaaaaaaaataataacccacacacacaaagagtgttgaggacttgtagcttaaaaaaaataagttttaaaaactgactttctgtatttatgatagatatgaccatttttggtgttgagtagattgttgcattggaaatgaactgaagcagtatggtagatttaaaaggaaaaaaaaaaaaaaaccttttgtgtacatttagctttttgtatggtccagctgacagctcctcatttgatgttgtcttgttcattcctagcagatgatagattgcaatccgttgattcgcctaagcttttctccccttgtcccttaattccactttctctttcttgtcccttaattccactttctctttccttctcccacctcccgtcctataatctcccacttaaggtagctgccttcatttcttagagggagctgcagaattattttataaaactaaagaaagaatttcaagggattctaggggtcattaggatcctcacagattatttttggttggggagttgaaactttttaaaggcatataattctagttacctgtgtctgttagctttgtgcatttattttttatttatccttcttttggcttttttttctttgtaccccttcttttcctccttgtttggtaggagcttcaaatattctttttttttctatactaaaggatttgtttccatttgtgtaattggctgtgtacttttcttttctaaaaaaagtttttggttagggatttggtttttggttttgtgtttgt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//

Annotations:

ANNOTATIONS from NCBI Entrez Gene (20130726):
            GeneID:463 -> Molecular function: GO:0003700 [sequence-specific DNA binding transcription factor activity] evidence: NAS
            GeneID:463 -> Molecular function: GO:0003705 [RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity] evidence: TAS
            GeneID:463 -> Molecular function: GO:0008270 [zinc ion binding] evidence: IEA
            GeneID:463 -> Molecular function: GO:0019899 [enzyme binding] evidence: IPI
            GeneID:463 -> Molecular function: GO:0043565 [sequence-specific DNA binding] evidence: IEA
            GeneID:463 -> Molecular function: GO:0044212 [transcription regulatory region DNA binding] evidence: IDA
            GeneID:463 -> Biological process: GO:0000122 [negative regulation of transcription from RNA polymerase II promoter] evidence: IGI
            GeneID:463 -> Biological process: GO:0006355 [regulation of transcription, DNA-dependent] evidence: TAS
            GeneID:463 -> Biological process: GO:0006366 [transcription from RNA polymerase II promoter] evidence: TAS
            GeneID:463 -> Biological process: GO:0007517 [muscle organ development] evidence: IEA
            GeneID:463 -> Biological process: GO:0045662 [negative regulation of myoblast differentiation] evidence: IDA
            GeneID:463 -> Biological process: GO:0045663 [positive regulation of myoblast differentiation] evidence: IDA
            GeneID:463 -> Biological process: GO:0045892 [negative regulation of transcription, DNA-dependent] evidence: IDA
            GeneID:463 -> Cellular component: GO:0005634 [nucleus] evidence: TAS
            GeneID:463 -> Cellular component: GO:0005667 [transcription factor complex] evidence: IDA
            GeneID:463 -> Cellular component: GO:0005739 [mitochondrion] evidence: IEA

by @meso_cacase at DBCLS
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