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2024-04-17 04:33:11, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_001142272 3227 bp mRNA linear PRI 17-APR-2013
DEFINITION Homo sapiens RAB11 family interacting protein 3 (class II)
(RAB11FIP3), transcript variant 2, mRNA.
ACCESSION NM_001142272
VERSION NM_001142272.1 GI:214010164
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3227)
AUTHORS Park,U.H., Kim,E.J. and Um,S.J.
TITLE A novel cytoplasmic adaptor for retinoic acid receptor (RAR) and
thyroid receptor functions as a Derepressor of RAR in the absence
of retinoic acid
JOURNAL J. Biol. Chem. 285 (44), 34269-34278 (2010)
PUBMED 20736163
REMARK GeneRIF: CART1 might be a cytoplasmic, testis-specific derepressor
of RAR
REFERENCE 2 (bases 1 to 3227)
AUTHORS Horgan,C.P., Hanscom,S.R., Jolly,R.S., Futter,C.E. and
McCaffrey,M.W.
TITLE Rab11-FIP3 binds dynein light intermediate chain 2 and its
overexpression fragments the Golgi complex
JOURNAL Biochem. Biophys. Res. Commun. 394 (2), 387-392 (2010)
PUBMED 20214888
REMARK GeneRIF: FIP3 was identified as the first membrane-associated
interacting-partner for DLIC-2.
REFERENCE 3 (bases 1 to 3227)
AUTHORS Jing,J., Tarbutton,E., Wilson,G. and Prekeris,R.
TITLE Rab11-FIP3 is a Rab11-binding protein that regulates breast cancer
cell motility by modulating the actin cytoskeleton
JOURNAL Eur. J. Cell Biol. 88 (6), 325-341 (2009)
PUBMED 19327867
REMARK GeneRIF: Rab11-FIP3 is a Rab11-binding protein that regulates
breast cancer cell motility by modulating the actin
cytoskeleton.(325-41)
REFERENCE 4 (bases 1 to 3227)
AUTHORS Simon,G.C., Schonteich,E., Wu,C.C., Piekny,A., Ekiert,D., Yu,X.,
Gould,G.W., Glotzer,M. and Prekeris,R.
TITLE Sequential Cyk-4 binding to ECT2 and FIP3 regulates cleavage furrow
ingression and abscission during cytokinesis
JOURNAL EMBO J. 27 (13), 1791-1803 (2008)
PUBMED 18511905
REFERENCE 5 (bases 1 to 3227)
AUTHORS Schonteich,E., Pilli,M., Simon,G.C., Matern,H.T., Junutula,J.R.,
Sentz,D., Holmes,R.K. and Prekeris,R.
TITLE Molecular characterization of Rab11-FIP3 binding to ARF GTPases
JOURNAL Eur. J. Cell Biol. 86 (8), 417-431 (2007)
PUBMED 17628206
REMARK GeneRIF: FIP3 is a scaffolding protein that, in addition to
regulating endosome targeting to the cleavage furrow, also is
required for Arf6 recruitment to the midbody during late telophase.
REFERENCE 6 (bases 1 to 3227)
AUTHORS Hales,C.M., Griner,R., Hobdy-Henderson,K.C., Dorn,M.C., Hardy,D.,
Kumar,R., Navarre,J., Chan,E.K., Lapierre,L.A. and Goldenring,J.R.
TITLE Identification and characterization of a family of
Rab11-interacting proteins
JOURNAL J. Biol. Chem. 276 (42), 39067-39075 (2001)
PUBMED 11495908
REFERENCE 7 (bases 1 to 3227)
AUTHORS Prekeris,R., Davies,J.M. and Scheller,R.H.
TITLE Identification of a novel Rab11/25 binding domain present in Eferin
and Rip proteins
JOURNAL J. Biol. Chem. 276 (42), 38966-38970 (2001)
PUBMED 11481332
REFERENCE 8 (bases 1 to 3227)
AUTHORS Shin,O.H., Couvillon,A.D. and Exton,J.H.
TITLE Arfophilin is a common target of both class II and class III
ADP-ribosylation factors
JOURNAL Biochemistry 40 (36), 10846-10852 (2001)
PUBMED 11535061
REFERENCE 9 (bases 1 to 3227)
AUTHORS Daniels,R.J., Peden,J.F., Lloyd,C., Horsley,S.W., Clark,K.,
Tufarelli,C., Kearney,L., Buckle,V.J., Doggett,N.A., Flint,J. and
Higgs,D.R.
TITLE Sequence, structure and pathology of the fully annotated terminal 2
Mb of the short arm of human chromosome 16
JOURNAL Hum. Mol. Genet. 10 (4), 339-352 (2001)
PUBMED 11157797
REFERENCE 10 (bases 1 to 3227)
AUTHORS Shin,O.H., Ross,A.H., Mihai,I. and Exton,J.H.
TITLE Identification of arfophilin, a target protein for GTP-bound class
II ADP-ribosylation factors
JOURNAL J. Biol. Chem. 274 (51), 36609-36615 (1999)
PUBMED 10593962
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
DC395000.1, DC404361.1, AK293644.1 and BC051360.1.
Summary: Proteins of the large Rab GTPase family (see RAB1A; MIM
179508) have regulatory roles in the formation, targeting, and
fusion of intracellular transport vesicles. RAB11FIP3 is one of
many proteins that interact with and regulate Rab GTPases (Hales et
al., 2001 [PubMed 11495908]).[supplied by OMIM, Mar 2008].
Transcript Variant: This variant (2) differs in the 5' UTR and
coding sequence compared to variant 1. The resulting isoform (2)
has a shorter and distinct N-terminus compared to isoform 1.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AK303061.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
ERS025084, ERS025088 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-502 DC395000.1 1-502
503-603 DC404361.1 505-605
604-1737 AK293644.1 519-1652
1738-3227 BC051360.1 2783-4272
FEATURES Location/Qualifiers
source 1..3227
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="16"
/map="16p13.3"
gene 1..3227
/gene="RAB11FIP3"
/gene_synonym="CART1; Rab11-FIP3"
/note="RAB11 family interacting protein 3 (class II)"
/db_xref="GeneID:9727"
/db_xref="HGNC:17224"
/db_xref="MIM:608738"
exon 1..196
/gene="RAB11FIP3"
/gene_synonym="CART1; Rab11-FIP3"
/inference="alignment:Splign:1.39.8"
variation 113..115
/gene="RAB11FIP3"
/gene_synonym="CART1; Rab11-FIP3"
/replace=""
/replace="att"
/db_xref="dbSNP:3837776"
misc_feature 122..124
/gene="RAB11FIP3"
/gene_synonym="CART1; Rab11-FIP3"
/note="upstream in-frame stop codon"
variation 149
/gene="RAB11FIP3"
/gene_synonym="CART1; Rab11-FIP3"
/replace="c"
/replace="t"
/db_xref="dbSNP:182286190"
variation 150
/gene="RAB11FIP3"
/gene_synonym="CART1; Rab11-FIP3"
/replace="a"
/replace="g"
/db_xref="dbSNP:367831398"
variation 157
/gene="RAB11FIP3"
/gene_synonym="CART1; Rab11-FIP3"
/replace="c"
/replace="t"
/db_xref="dbSNP:371647190"
variation 158
/gene="RAB11FIP3"
/gene_synonym="CART1; Rab11-FIP3"
/replace="a"
/replace="g"
/db_xref="dbSNP:377173071"
CDS 182..1564
/gene="RAB11FIP3"
/gene_synonym="CART1; Rab11-FIP3"
/EC_number="2.7.4.6"
/note="isoform 2 is encoded by transcript variant 2;
rab11-family interacting protein 3; eferin; rab11
family-interacting protein 3; PAC196A12.1; FIP3-Rab11;
MU-MB-17.148; arfophilin-1; EF hands-containing
Rab-interacting protein; cytoplasmic adaptor for RAR and
TR"
/codon_start=1
/product="rab11 family-interacting protein 3 isoform 2"
/protein_id="NP_001135744.1"
/db_xref="GI:214010165"
/db_xref="CCDS:CCDS45364.1"
/db_xref="GeneID:9727"
/db_xref="HGNC:17224"
/db_xref="MIM:608738"
/translation="
MPFLKANEVTDSAYMGSESTYSECETFTDEDTSTLVHPELQPEGDADSAGGSAVPSECLDAMEEPDHGALLLLPGRPHPHGQSVITVIGGEEHFEDYGEGSEAELSPETLCNGQLGCSDPAFLTPSPTKRLSSKKVARYLHQSGALTMEALEDPSPELMEGPEEDIADKVVFLERRVLELEKDTAATGEQHSRLRQENLQLVHRANALEEQLKEQELRACEMVLEETRRQKELLCKMEREKSIEIENLQTRLQQLDEENSELRSCTPCLKANIERLEEEKQKLLDEIESLTLRLSEEQENKRRMGDRLSHERHQFQRDKEATQELIEDLRKQLEHLQLLKLEAEQRRGRSSSMGLQEYHSRARESELEQEVRRLKQDNRNLKEQNEELNGQIITLSIQGAKSLFSTAFSESLAAEISSVSRDELMEAIQKQEEINFRLQDYIDRIIVAIMETNPSILEVK
" misc_feature 941..1072 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /note="Homeobox associated leucine zipper; Region: HALZ; cl02577" /db_xref="CDD:207657" misc_feature 1439..1561 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /note="FIP domain; Region: RBD-FIP; pfam09457" /db_xref="CDD:204244" exon 197..408 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /inference="alignment:Splign:1.39.8" variation 197 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="" /replace="g" /db_xref="dbSNP:34461402" variation 198 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="g" /db_xref="dbSNP:201837898" variation 211 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:200080085" variation 220 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:147525736" variation 265 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:371667130" variation 268 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:184050293" variation 296 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="g" /db_xref="dbSNP:140192106" variation 317 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:200846343" variation 319 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="c" /db_xref="dbSNP:377181260" variation 331 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:141824853" variation 340 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:372993967" variation 361 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:374083961" variation 365 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:377133403" variation 377 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:114654620" variation 379 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:139755055" exon 409..558 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /inference="alignment:Splign:1.39.8" variation 413 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="c" /db_xref="dbSNP:149810973" variation 416 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="c" /db_xref="dbSNP:375661104" variation 439 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:146483534" variation 446 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:139898544" variation 451 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:139836747" variation 485 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="g" /db_xref="dbSNP:369419129" variation 489 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:372735637" variation 496 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:35538165" variation 527 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="g" /replace="t" /db_xref="dbSNP:140423430" variation 551 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="c" /db_xref="dbSNP:143244233" variation 552 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="g" /db_xref="dbSNP:377509491" variation 553 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:150937967" exon 559..594 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /inference="alignment:Splign:1.39.8" variation 565 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:140774389" exon 595..688 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /inference="alignment:Splign:1.39.8" variation 604 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:138733084" variation 626 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:143162766" variation 627 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="c" /db_xref="dbSNP:111629047" variation 645 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:371775868" variation 649 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:147093689" variation 664 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="c" /db_xref="dbSNP:138530819" exon 689..792 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /inference="alignment:Splign:1.39.8" variation 727 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:149648167" variation 728 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:144232739" variation 732 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:138453938" variation 733 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:148728201" variation 737 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="g" /replace="t" /db_xref="dbSNP:7201481" variation 743 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:141421403" exon 793..933 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /inference="alignment:Splign:1.39.8" variation 798 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:111839274" variation 800 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:146319300" variation 814 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:373096410" variation 840 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:190687913" variation 864 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:377399918" variation 867 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:141366917" variation 906 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:376460823" variation 916 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:143343068" exon 934..1015 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /inference="alignment:Splign:1.39.8" variation 939 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="t" /db_xref="dbSNP:375152901" variation 943 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:368191621" variation 978 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:146735885" variation 1000 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:199606652" variation 1004 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="c" /db_xref="dbSNP:139187380" variation 1005 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:149968783" variation 1008 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="g" /replace="t" /db_xref="dbSNP:78138787" variation 1013 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:201674166" exon 1016..1153 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /inference="alignment:Splign:1.39.8" variation 1016 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="g" /db_xref="dbSNP:139080033" variation 1031 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:148954418" variation 1054 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:144204981" variation 1058 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:199754721" variation 1083 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:376415107" exon 1154..1309 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /inference="alignment:Splign:1.39.8" variation 1221 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:371078762" variation 1265 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:72767836" exon 1310..1450 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /inference="alignment:Splign:1.39.8" variation 1316 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:147790026" variation 1317 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:141238867" variation 1322 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:146249457" variation 1348 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:201637223" variation 1362 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:376752306" variation 1378 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:369506441" variation 1399 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:147082857" variation 1408 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:11537754" variation 1436 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:201070430" variation 1443 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:141093027" exon 1451..3206 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /inference="alignment:Splign:1.39.8" variation 1462 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:142673366" variation 1495 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:138947628" variation 1507 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:149343842" variation 1516 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="c" /db_xref="dbSNP:117823652" variation 1542 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:146307726" variation 1562 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:375793202" variation 1573 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="c" /db_xref="dbSNP:370186483" variation 1780 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="" /replace="c" /db_xref="dbSNP:200010101" variation 1922 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="g" /db_xref="dbSNP:372934836" variation 1936 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="g" /db_xref="dbSNP:370307940" variation 1952 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="g" /replace="t" /db_xref="dbSNP:373375704" variation 2019 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:185438771" variation 2038 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:74003955" variation 2059 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:117089608" variation 2071 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:191619799" variation 2078 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:145936090" variation 2172 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:183021296" variation 2184 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:371410470" variation 2195 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:139486321" variation 2276 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:186824078" variation 2310 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="g" /db_xref="dbSNP:149264961" variation 2344 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:144512284" variation 2379 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:191660227" variation 2456 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:183291067" variation 2547 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:112010690" variation 2552 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="g" /db_xref="dbSNP:371727064" variation 2565 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:187993036" variation 2629 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:1054334" variation 2659 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:368190643" variation 2679 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:116098108" variation 2744..2745 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="" /replace="gtgtgcgcgcatgtgtgcgtgcgtgc" /db_xref="dbSNP:147429153" variation 2763 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:75309937" variation 2769..2770 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="" /replace="gtgtgcgcgcatgtgtgcgtgcgtgc" /db_xref="dbSNP:58290701" variation 2769 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="c" /replace="t" /db_xref="dbSNP:4984887" variation 2770..2771 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="" /replace="ac" /replace="gtgtgcgcgcatgtgtgcgtgcgtgc" /db_xref="dbSNP:138211568" variation 2818 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:374586339" STS 2858..3095 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /standard_name="HBA572246" /db_xref="UniSTS:546436" variation 2863..2864 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="" /replace="aa" /db_xref="dbSNP:369256539" variation 2873 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:376714396" variation 2958..2959 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="" /replace="gt" /db_xref="dbSNP:59474626" variation 2968 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:58027215" variation 2971..2972 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="" /replace="at" /replace="atat" /db_xref="dbSNP:374124875" variation 2981..2982 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="" /replace="at" /db_xref="dbSNP:59976885" variation 2990..2991 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="a" /replace="g" /db_xref="dbSNP:1063974" variation 2998..2999 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /replace="" /replace="at" /db_xref="dbSNP:57161308" STS 3019..3156 /gene="RAB11FIP3" /gene_synonym="CART1; Rab11-FIP3" /standard_name="RH98692" /db_xref="UniSTS:88889" ORIGIN
attagagcgtgtctgggagcaggttaaactttctcctaggtggtgatgtgcctccaggtgagcgcacaggctttgcagaaaccccagcatgacaagcaagtaggaaggtgacattgttgtttgagaaaagccagtgacccggttgggacggagacacgatggggagccggtctccaacagcatgcccttcctgaaggccaacgaggtgacggacagcgcgtacatgggctccgagagcacctacagtgagtgtgagaccttcacggacgaggacaccagcaccctggtgcaccctgagctgcaacctgaaggggacgcagacagtgccggcggctcggccgtgccctctgagtgcctggacgccatggaggagcccgaccatggtgccctgctgctgctcccaggcaggcctcacccccatggccagtctgtcatcacggtgatcgggggcgaggagcactttgaggactacggtgaaggcagtgaggcggagctgtccccagagaccctatgcaacgggcagctgggctgcagtgaccccgctttcctcacgcccagtccgacaaagcggctctccagcaagaaggtggcaaggtacctgcaccagtcaggggccctgaccatggaggccctggaggacccttcccccgagctcatggagggcccagaggaggacattgctgacaaggttgtcttcctggaaaggcgtgtgctggagctggaaaaggacacggcagccaccggtgagcaacacagccgcctgaggcaggagaacctgcagctggtgcacagagcaaacgccctggaggagcagctgaaggagcaggagctgagagcctgcgagatggtcctggaagagacccggcgtcagaaggagctcctgtgcaagatggagagggagaagagcattgagatcgagaacctgcagaccaggctacagcaactggacgaggagaacagtgaactccggtcctgcacgccctgtctgaaggccaacattgagcgtctggaggaggagaagcagaagctgttggatgagatagagtcgctgacgctgcggctcagtgaagagcaggagaacaagaggagaatgggggacaggctgagtcacgagaggcaccagttccagagggacaaggaggccacccaggagctgatcgaggacctccgaaagcagctggagcacctgcagctcctcaagctggaggccgagcagcggcggggccgcagcagcagcatgggcctgcaggagtaccacagccgcgcccgggagagcgagctggagcaggaggtccgcaggctgaagcaggacaaccgcaacctgaaggagcagaacgaggagctgaacgggcagatcattaccctcagcatccagggcgccaagagcctcttctccacagccttctctgagtccctggctgcagagatcagctccgtctcccgagatgagctcatggaggcgattcagaagcaggaggagatcaacttccgcctgcaggactacatcgacaggatcatcgtggccatcatggagaccaacccgtccatcctggaggtcaagtagaggcaggaaggtccagcctgagctggattcgggactccaacaccctggagtggttccgtcagaccatgaggagccaagaccagcaggtcccacagccgacagtgcccagagcatgcagggaaccctcgtgcagctgagctggggccgccaaagaccggggctgccaaaggggcagagggtggtggagaggagagggagaaagggaagtcccagggcccggggtccacagaggatgagggttgtggcagggccgtccatcagcgctgaccttccgggggcccagagcttcccagccctgagtcaagctggccatgaacgcgtacacttcagttcagcaggatgggctggagagcctctctgtgcagcggtgtggggtgagccctgctgtggcctccttgtggtggtccctcttcccacgtgcagccctgttgggaagaaaggaagaaaacaggtccctccaggggtgctgctgcctaagccacccacataagtacgctggtgccgtgtcacccatgttgagccgctcctgatggctgacgggctcccagaccctcacctcggacatggtggtgggggaaggacgggtgggcaaggctggtgcgttccccagctctccctacgctgctcgggccattgcccagccagatgtggtcacctcagtccagctctggggcctccaggccatgtggctgttcccacggcccagtcctcgctgcagtaacccctgggggctctgaccacctatgggggccgggcaggagcctctggggcctccactccgacatcaggacctgagatgaccgctgtgtggcgctctctccctgggcagggtggatgccacaggcccctctggctcccaggtgctgcttctccacaggtgcggcctggcccggcctcctaaaggccacaccctccccacgcacttcccaggccagaatccaaacatcgggaaccctgttttcttctgggtgtgtctcacttagaaatcgtggttcttccccgagggtgcatgttgcaggagggagagggcagggaagactcacagcagagcaggagggggcctgtgcttctcggggtctgcaccccaggcacagcggtgtcaccccgcaggaccgcgggcctgccccaacccccagcattcccgggtgggcccagaccccatcaccaagactggccacccgctgcgtgtgtgtgcgcgcgcgtgtacgtgtggccccacatccgccgccttccacgctaggatgtaagaggtcgcctcctattgtacatttggggaaagccttgggtgtaaatcagtgtaaacttggaggagagatttttctatcatgtagagtaggtattttttatagattgaaggttgatcaattttttaatactttcaagagaaaactgtgtatacacatgaaatatatatatatatatatatatatatatgtataatatataaagactggcaccctgcctctctgtgcccaggcccagccctggtgacatggcaccactcagcagtgctgtcactgtaagcatggactcccaggagacagtgtgggaaacgctcctgctttaattccccgagaaacggctcttcctgcctggatgcaggagggcaggggccaccacagattaaagctgttactgcacaaaaaaaaaaaaaaaaaaaaaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:9727 -> Molecular function: GO:0005509 [calcium ion binding] evidence: IEA
GeneID:9727 -> Molecular function: GO:0005515 [protein binding] evidence: IPI
GeneID:9727 -> Molecular function: GO:0017137 [Rab GTPase binding] evidence: IPI
GeneID:9727 -> Molecular function: GO:0017137 [Rab GTPase binding] evidence: NAS
GeneID:9727 -> Molecular function: GO:0030306 [ADP-ribosylation factor binding] evidence: IPI
GeneID:9727 -> Molecular function: GO:0042803 [protein homodimerization activity] evidence: IDA
GeneID:9727 -> Biological process: GO:0000910 [cytokinesis] evidence: IMP
GeneID:9727 -> Biological process: GO:0016192 [vesicle-mediated transport] evidence: TAS
GeneID:9727 -> Biological process: GO:0032456 [endocytic recycling] evidence: IDA
GeneID:9727 -> Cellular component: GO:0005634 [nucleus] evidence: IDA
GeneID:9727 -> Cellular component: GO:0005730 [nucleolus] evidence: IDA
GeneID:9727 -> Cellular component: GO:0005768 [endosome] evidence: IDA
GeneID:9727 -> Cellular component: GO:0005813 [centrosome] evidence: IDA
GeneID:9727 -> Cellular component: GO:0005825 [half bridge of spindle pole body] evidence: IDA
GeneID:9727 -> Cellular component: GO:0030496 [midbody] evidence: IDA
GeneID:9727 -> Cellular component: GO:0032154 [cleavage furrow] evidence: IDA
GeneID:9727 -> Cellular component: GO:0043231 [intracellular membrane-bounded organelle] evidence: IDA
GeneID:9727 -> Cellular component: GO:0055037 [recycling endosome] evidence: IDA
GeneID:9727 -> Cellular component: GO:0055038 [recycling endosome membrane] evidence: IEA
ANNOTATIONS from NCBI Entrez Gene (20130726):
NP_001135744 -> EC 2.7.4.6
by
@meso_cacase at
DBCLS
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