2024-04-20 05:09:12, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_001134672 2565 bp mRNA linear PRI 17-APR-2013 DEFINITION Homo sapiens family with sequence similarity 204, member A (FAM204A), transcript variant 2, mRNA. ACCESSION NM_001134672 VERSION NM_001134672.1 GI:197927281 KEYWORDS RefSeq. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2565) AUTHORS Lamesch,P., Li,N., Milstein,S., Fan,C., Hao,T., Szabo,G., Hu,Z., Venkatesan,K., Bethel,G., Martin,P., Rogers,J., Lawlor,S., McLaren,S., Dricot,A., Borick,H., Cusick,M.E., Vandenhaute,J., Dunham,I., Hill,D.E. and Vidal,M. TITLE hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes JOURNAL Genomics 89 (3), 307-315 (2007) PUBMED 17207965 REFERENCE 2 (bases 1 to 2565) AUTHORS Grupe,A., Li,Y., Rowland,C., Nowotny,P., Hinrichs,A.L., Smemo,S., Kauwe,J.S., Maxwell,T.J., Cherny,S., Doil,L., Tacey,K., van Luchene,R., Myers,A., Wavrant-De Vrieze,F., Kaleem,M., Hollingworth,P., Jehu,L., Foy,C., Archer,N., Hamilton,G., Holmans,P., Morris,C.M., Catanese,J., Sninsky,J., White,T.J., Powell,J., Hardy,J., O'Donovan,M., Lovestone,S., Jones,L., Morris,J.C., Thal,L., Owen,M., Williams,J. and Goate,A. TITLE A scan of chromosome 10 identifies a novel locus showing strong association with late-onset Alzheimer disease JOURNAL Am. J. Hum. Genet. 78 (1), 78-88 (2006) PUBMED 16385451 REMARK GeneRIF: Observational study of gene-disease association. (HuGE Navigator) REFERENCE 3 (bases 1 to 2565) AUTHORS Oh,J.H., Yang,J.O., Hahn,Y., Kim,M.R., Byun,S.S., Jeon,Y.J., Kim,J.M., Song,K.S., Noh,S.M., Kim,S., Yoo,H.S., Kim,Y.S. and Kim,N.S. TITLE Transcriptome analysis of human gastric cancer JOURNAL Mamm. Genome 16 (12), 942-954 (2005) PUBMED 16341674 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from DA168924.1, BM837313.1, BC023577.2 and AL365498.21. Transcript Variant: This variant (2) differs in the 5' UTR when compared to variant 1. Sequence Note: The RefSeq transcript and protein were derived from transcript and genomic sequence to make the sequence consistent with the reference genome assembly. The extent of this transcript is supported by transript alignments. ##Evidence-Data-START## Transcript exon combination :: BQ425453.1, BE410050.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support ERS025081, ERS025082 [ECO:0000350] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-7 DA168924.1 5-11 8-663 BM837313.1 1-656 664-905 BC023577.2 848-1089 906-2565 AL365498.21 35892-37551 c FEATURES Location/Qualifiers source 1..2565 /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /chromosome="10" /map="10q26.11" gene 1..2565 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /note="family with sequence similarity 204, member A" /db_xref="GeneID:63877" /db_xref="HGNC:25794" misc_feature <1..>1660 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /note="annotated region of clone" exon 1..58 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /inference="alignment:Splign:1.39.8" exon 59..300 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /inference="alignment:Splign:1.39.8" CDS 67..768 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /codon_start=1 /product="protein FAM204A" /protein_id="NP_001128144.1" /db_xref="GI:197927282" /db_xref="CCDS:CCDS7605.1" /db_xref="GeneID:63877" /db_xref="HGNC:25794" /translation="
MWSGLLPPGLNESDAESNSEDEATLENSGLNLQEDKEDESIRKTEIIDFSTDEPKTETESNVNAYEECPSGIPIDMWNKFQELHKKHSEQKSTTSRFRGKRRKRSRKDKLKNEKELHSEPSSNETQWKELTQYFGVNDRFDPPVKRKKVEKSGLEKRIDQAVEEWNIEKAEELSNQLATRELGVKIAKAVACHNFVKAKKEVENSQAARKKKKLAWGFEAKKRWETKSNMGYM
" exon 301..388 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /inference="alignment:Splign:1.39.8" exon 389..419 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /inference="alignment:Splign:1.39.8" exon 420..519 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /inference="alignment:Splign:1.39.8" exon 520..609 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /inference="alignment:Splign:1.39.8" exon 610..716 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /inference="alignment:Splign:1.39.8" STS 654..754 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /standard_name="RH143414" /db_xref="UniSTS:232661" STS 667..790 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /standard_name="SHGC-76092" /db_xref="UniSTS:75119" exon 717..2565 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /inference="alignment:Splign:1.39.8" STS 724..830 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /standard_name="G22405" /db_xref="UniSTS:51049" STS 817..909 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /standard_name="RH93408" /db_xref="UniSTS:88554" variation 1119 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /replace="c" /replace="t" /db_xref="dbSNP:201808962" polyA_signal 1827..1832 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" polyA_site 1860 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" STS 1879..2060 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /standard_name="SHGC-52428" /db_xref="UniSTS:7398" STS 1882..2157 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" /standard_name="SHGC-132812" /db_xref="UniSTS:170902" polyA_site 2274 /gene="FAM204A" /gene_synonym="bA319I23.1; C10orf84; RP11-319I23.1" ORIGIN
agaaggcgcgatgttgacggggtcctaagatggctgctgggcgaccacttcctgacagaagaaaagatgtggagtgggctgctacctcctggcctaaatgaaagtgacgctgagtcaaactcggaagatgaagctacgttggagaactctggacttaacttacaggaagataaagaggatgagagcatcagaaaaacagaaatcatagatttctcaacagatgaaccaaaaactgaaacagagtcaaatgtaaatgcctatgaagagtgtccttctggaattcccatagatatgtggaataaatttcaagaattgcataaaaaacattctgaacagaaaagcacaacctcaagattcagagggaaaagaagaaaacgctccagaaaagataaattgaagaatgaaaaagaattacatagtgaaccgtcctcaaatgaaacccagtggaaagagcttactcagtattttggagtcaatgatagatttgacccgcctgttaaaaggaaaaaagttgagaagtcaggccttgaaaagaggatagaccaggctgtggaggagtggaatattgagaaggctgaggaactcagcaaccagctagctactcgagagcttggtgtaaaaattgccaaagcagttgcctgccacaactttgtaaaagccaaaaaggaggttgaaaattcacaggctgcccgaaaaaagaagaaacttgcatgggggtttgaagcaaagaagagatgggaaaccaaaagcaacatgggatacatgtaacttgccagagtgcttcaagacatttgtagactcaaatgctcaatttactgagaatgttttcctgcctatgttaatatgtcagaaaattgatagcactaaaacaaaaataagcataaaatttgggattttgattatcagctcttttcagtctttctttaaggactttgtcctattgaagtgaataaaatgaagcattctgttatttgtataagaaatgtaagaaaaaaaatatagaaagaagaggataggattttgtttatttgtatggatggacccttggtataaaatcacttttggcgctttccattcatttggtttagcacagccagtgagcttctcgtactttctttctttttttttttttttttgagacagagcctcgcttgctctgtcacccaggctagagtgcagtagcacgatcttggctcactgcaaccactgcttcctgggttcaagtgattctcatgcctcagcctcctgagtagctgggattatggacaaatgccaccacacccggctaattttttttttttttttgtatttttagtagagacagagttttgctgtgttggtcaggctggtcttgaactcctggcctcatatgattcacctgcctctgcctcccaaagttctgggagtacagacatgagctaccatgctgcccttgtattttcttatctgtacccagtgtaactacacgtttactggaactgtgtttttaagactgacagttgtttataatggattagtcgtaagtaccaaaaagtctcagttgatattatctttacaaatgacttgaccttaatgttataaaagtagttactgtttttttttaattggaggcagacttgatatttcagagttgcatagtaaaagcaatttgttaatttttgtgtactttcagataaactattacaataaagaaaggagcagaatgtagtatttggaagatgatttaaattcagcaacgcctaaaaatgtcttcctaagtatttttctcagccatgtcattctttaaattatgagatggttcttagaagagaaaatggtgtaattgtattaaacagacaattataactcaagataatataactttgaaccttctaagaactgatttgtttggttttcctcccattccccattcctccttaaaagattgaatgaattaatgagcagaaagagaggattggtaacatgggaaatcgttttcattagatgtacatttcctggttctgacaggaaaggggctccagaaaatcataaaacaagcaggtgaacaagaccaggtgtgtcggcacctccctgctcagtgcccagcggaggtaaagaaccactcagcatggtttttgtcagttcacctcttctgtcgttgtcagaggtttcctacctgtctgatataaactttctctgggttgataatataaattcagaaacatgtaaaatgaatcatgattatattactgttatttttagacttaaaatagtaacaaaattttatttatggtggcacatttaatggctttttttttctgtgttctggaataagagaatacctagctactatttaagcatccaaaaatcatatcttgctttcatttagttgagaaaagccagcatagagaaagcaaagttttagaatattatgtgtcatactaattcagtatccagaccaaatgttggaaagtcttattttatgatttaatatcccttgttccattttacagatatgatcatgtaaaacttacctacaatattcatttcaaactgctaaattaggtaaatacagacttttagtat
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