Home |
Help |
Advanced search
2024-04-20 11:10:29, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_001127714 12325 bp mRNA linear PRI 17-APR-2013
DEFINITION Homo sapiens human immunodeficiency virus type I enhancer binding
protein 3 (HIVEP3), transcript variant 2, mRNA.
ACCESSION NM_001127714 XR_110503 XR_112054 XR_113348
VERSION NM_001127714.2 GI:347582596
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 12325)
AUTHORS Young,N.A., Friedman,A.K., Kaffenberger,B., Rajaram,M.V.,
Birmingham,D.J., Rovin,B.H., Hebert,L.A., Schlesinger,L.S., Wu,L.C.
and Jarjour,W.N.
TITLE Novel estrogen target gene ZAS3 is overexpressed in systemic lupus
erythematosus
JOURNAL Mol. Immunol. 54 (1), 23-31 (2013)
PUBMED 23178823
REMARK GeneRIF: ZAS3 expression is directly regulated by estrogen and is
overexpressed in lupus. Its upregulation by estrogen could play a
critical role in female-biased autoimmune disorders.
REFERENCE 2 (bases 1 to 12325)
AUTHORS Shin,D.H., Park,K.W., Wu,L.C. and Hong,J.W.
TITLE ZAS3 promotes TNFalpha-induced apoptosis by blocking
NFvarkappaB-activated expression of the anti-apoptotic genes TRAF1
and TRAF2
JOURNAL BMB Rep 44 (4), 267-272 (2011)
PUBMED 21524353
REMARK GeneRIF: The inhibitory effect of ZAS3 on NF-kappa B activity is
mediated by neither direct association with N-kappa B nor
disrupting nuclear localization of NFvarkappaB.
REFERENCE 3 (bases 1 to 12325)
AUTHORS Yakovich,A.J., Jiang,B., Allen,C.E., Du,J., Wu,L.C. and
Barnard,J.A.
TITLE ZAS3 accentuates transforming growth factor beta signaling in
epithelial cells
JOURNAL Cell. Signal. 23 (1), 105-113 (2011)
PUBMED 20732416
REMARK GeneRIF: An interaction between ZAS3 and Smad proteins enhances
transforming growth factor beta signaling.
REFERENCE 4 (bases 1 to 12325)
AUTHORS Hong,J.W. and Wu,L.C.
TITLE ZAS3 represses NFkappaB-dependent transcription by direct
competition for DNA binding
JOURNAL BMB Rep 43 (12), 807-812 (2010)
PUBMED 21189157
REMARK GeneRIF: DNA competition by ZAS3 is sufficient to repress
transcription activated by NF-kappaB and that ZAS3 is an endogenous
kappaB-motif competitor with ininsic repression activity.
REFERENCE 5 (bases 1 to 12325)
AUTHORS Li,Y.J., Deng,J., Mayhew,G.M., Grimsley,J.W., Huo,X. and Vance,J.M.
TITLE Investigation of the PARK10 gene in Parkinson disease
JOURNAL Ann. Hum. Genet. 71 (PT 5), 639-647 (2007)
PUBMED 17388942
REMARK GeneRIF: Single nucleotide polymorphisms strongly support HIVEP3 as
a candidate for PARK10 in Parkinson disease.
GeneRIF: Observational study of gene-disease association. (HuGE
Navigator)
REFERENCE 6 (bases 1 to 12325)
AUTHORS Qin,H., Wang,J., Liang,Y., Taniguchi,Y., Tanigaki,K. and Han,H.
TITLE RING1 inhibits transactivation of RBP-J by Notch through
interaction with LIM protein KyoT2
JOURNAL Nucleic Acids Res. 32 (4), 1492-1501 (2004)
PUBMED 14999091
REMARK Publication Status: Online-Only
REFERENCE 7 (bases 1 to 12325)
AUTHORS Oukka,M., Wein,M.N. and Glimcher,L.H.
TITLE Schnurri-3 (KRC) interacts with c-Jun to regulate the IL-2 gene in
T cells
JOURNAL J. Exp. Med. 199 (1), 15-24 (2004)
PUBMED 14707112
REMARK GeneRIF: Overexpression of KRC in transformed and primary T cells
leads to increased IL-2 production.
REFERENCE 8 (bases 1 to 12325)
AUTHORS Oukka,M., Kim,S.T., Lugo,G., Sun,J., Wu,L.C. and Glimcher,L.H.
TITLE A mammalian homolog of Drosophila schnurri, KRC, regulates TNF
receptor-driven responses and interacts with TRAF2
JOURNAL Mol. Cell 9 (1), 121-131 (2002)
PUBMED 11804591
REFERENCE 9 (bases 1 to 12325)
AUTHORS Hicar,M.D., Liu,Y., Allen,C.E. and Wu,L.C.
TITLE Structure of the human zinc finger protein HIVEP3: molecular
cloning, expression, exon-intron structure, and comparison with
paralogous genes HIVEP1 and HIVEP2
JOURNAL Genomics 71 (1), 89-100 (2001)
PUBMED 11161801
REFERENCE 10 (bases 1 to 12325)
AUTHORS Rustgi,A.K., Van 't Veer,L.J. and Bernards,R.
TITLE Two genes encode factors with NF-kappa B- and H2TF1-like
DNA-binding properties
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 87 (22), 8707-8710 (1990)
PUBMED 2247438
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from BC152563.1, AC119676.2,
AL445933.32 and AI082114.1.
On Sep 23, 2011 this sequence version replaced gi:189181749.
Summary: This gene encodes a member of the human immunodeficiency
virus type 1 enhancer-binding protein family. Members of this
protein family contain multiple zinc finger and acid-rich (ZAS)
domains and serine-threonine rich regions. This protein acts as a
transcription factor and is able to regulate nuclear factor
kappaB-mediated transcription by binding the kappaB motif in target
genes. This protein also binds the recombination signal sequence
that flanks the V, D, and J regions of immunoglobulin and T-cell
receptors. Alternate splicing results in both coding and non-coding
transcript variants. [provided by RefSeq, Sep 2011].
Transcript Variant: This variant (2) lacks an alternate exon in the
5' UTR and uses an alternate splice site in the 3' coding region,
compared to variant 1. The resulting isoform (b) is shorter than
isoform a.
Sequence Note: The RefSeq transcript and protein were derived from
genomic sequence to make the sequence consistent with the reference
genome assembly. The genomic coordinates used for the transcript
record were based on alignments.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: BC152563.1, AB046775.3 [ECO:0000332]
RNAseq introns :: mixed/partial sample support
ERS025081, ERS025082 [ECO:0000350]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-415 BC152563.1 1-415
416-416 AC119676.2 42070-42070 c
417-2343 BC152563.1 417-2343
2344-4672 AL445933.32 146537-148865 c
4673-6750 BC152563.1 4673-6750
6751-7341 AL445933.32 78291-78881 c
7342-8026 BC152563.1 7342-8026
8027-11948 AL445933.32 72132-76053 c
11949-12325 AI082114.1 1-377 c
FEATURES Location/Qualifiers
source 1..12325
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="1"
/map="1p34"
gene 1..12325
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/note="human immunodeficiency virus type I enhancer
binding protein 3"
/db_xref="GeneID:59269"
/db_xref="HGNC:13561"
/db_xref="MIM:606649"
exon 1..295
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/inference="alignment:Splign:1.39.8"
exon 296..494
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/inference="alignment:Splign:1.39.8"
exon 495..6076
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/inference="alignment:Splign:1.39.8"
variation 669
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace="g"
/replace="t"
/db_xref="dbSNP:201869082"
misc_feature 986..988
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/note="upstream in-frame stop codon"
CDS 1016..8233
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/note="isoform b is encoded by transcript variant 2;
transcription factor HIVEP3; kappa-binding protein 1; zinc
finger protein ZAS3; kappa-B and V(D)J recombination
signal sequences-binding protein; ZAS family, member 3"
/codon_start=1
/product="transcription factor HIVEP3 isoform b"
/protein_id="NP_001121186.1"
/db_xref="GI:189181750"
/db_xref="CCDS:CCDS44124.1"
/db_xref="GeneID:59269"
/db_xref="HGNC:13561"
/db_xref="MIM:606649"
/translation="
MDPEQSVKGTKKAEGSPRKRLTKGEAIQTSVSSSVPYPGSGTAATQESPAQELLAPQPFPGPSSVLREGSQEKTGQQQKPPKRPPIEASVHISQLPQHPLTPAFMSPGKPEHLLEGSTWQLVDPMRPGPSGSFVAPGLHPQSQLLPSHASIIPPEDLPGVPKVFVPRPSQVSLKPTEEAHKKERKPQKPGKYICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKSHAHRIKAGLASGMGGEMYPHGLEMERIPGEEFEEPTEGESTDSEEETSATSGHPAELSPRPKQPLLSSGLYSSGSHSSSHERCSLSQSSTAQSLEDPPPFVEPSSEHPLSHKPEDTHTIKQKLALRLSERKKVIDEQAFLSPGSKGSTESGYFSRSESAEQQVSPPNTNAKSYAEIIFGKCGRIGQRTAMLTATSTQPLLPLSTEDKPSLVPLSVPRTQVIEHITKLITINEAVVDTSEIDSVKPRRSSLSRRSSMESPKSSLYREPLSSHSEKTKPEQSLLSLQHPPSTAPPVPLLRSHSMPSAACTISTPHHPFRGSYSFDDHITDSEALSHSSHVFTSHPRMLKRQPAIELPLGGEYSSEEPGPSSKDTASKPSDEVEPKESELTKKTKKGLKTKGVIYECNICGARYKKRDNYEAHKKYYCSELQIAKPISAGTHTSPEAEKSQIEHEPWSQMMHYKLGTTLELTPLRKRRKEKSLGDEEEPPAFESTKSQFGSPGPSDAARNLPLESTKSPAEPSKSVPSLEGPTGFQPRTPKPGSGSESGKERRTTSKEISVIQHTSSFEKSDSLEQPSGLEGEDKPLAQFPSPPPAPHGRSAHSLQPKLVRQPNIQVPEILVTEEPDRPDTEPEPPPKEPEKTEEFQWPQRSQTLAQLPAEKLPPKKKRLRLAEMAQSSGESSFESSVPLSRSPSQESNVSLSGSSRSASFERDDHGKAEAPSPSSDMRPKPLGTHMLTVPSHHPHAREMRRSASEQSPNVSHSAHMTETRSKSFDYGSLSLTGPSAPAPVAPPARVAPPERRKCFLVRQASLSRPPESELEVAPKGRQESEEPQPSSSKPSAKSSLSQISSAATSHGGPPGGKGPGQDRPPLGPTVPYTEALQVFHHPVAQTPLHEKPYLPPPVSLFSFQHLVQHEPGQSPEFFSTQAMSSLLSSPYSMPPLPPSLFQAPPLPLQPTVLHPGQLHLPQLMPHPANIPFRQPPSFLPMPYPTSSALSSGFFLPLQSQFALQLPGDVESHLPQIKTSLAPLATGSAGLSPSTEYSSDIRLPPVAPPASSSAPTSAPPLALPACPDTMVSLVVPVRVQTNMPSYGSAMYTTLSQILVTQSQGSSATVALPKFEEPPSKGTTVCGADVHEVGPGPSGLSEEQSRAFPTPYLRVPVTLPERKGTSLSSESILSLEGSSSTAGGSKRVLSPAGSLELTMETQQQKRVKEEEASKADEKLELVKPCSVVLTSTEDGKRPEKSHLGNQGQGRRELEMLSSLSSDPSDTKEIPPLPHPALSHGTAPGSEALKEYPQPSGKPHRRGLTPLSVKKEDSKEQPDLPSLAPPSSLPLSETSSRPAKSQEGTDSKKVLQFPSLHTTTNVSWCYLNYIKPNHIQHADRRSSVYAGWCISLYNPNLPGVSTKAALSLLRSKQKVSKETYTMATAPHPEAGRLVPSSSRKPRMTEVHLPSLVSPEGQKDLARVEKEEERRGEPEEDAPASQRGEPARIKIFEGGYKSNEEYVYVRGRGRGKYVCEECGIRCKKPSMLKKHIRTHTDVRPYVCKHCHFAFKTKGNLTKHMKSKAHSKKCQETGVLEELEAEEGTSDDLFQDSEGREGSEAVEEHQFSDLEDSDSDSDLDEDEDEDEEESQDELSRPSSEAPPPGPPHALRADSSPILGPQPPDAPASGTEATRGSSVSEAERLTASSCSMSSQSMPGLPWLGPAPLGSVEKDTGSALSYKPVSPRRPWSPSKEAGSRPPLARKHSLTKNDSSPQRCSPAREPQASAPSPPGLHVDPGRGMGALPCGSPRLQLSPLTLCPLGRELAPRAHVLSKLEGTTDPGLPRYSPTRRWSPGQAESPPRSAPPGKWALAGPGSPSAGEHGPGLGLDPRVLFPPAPLPHKLLSRSPETCASPWKAESRSPSCSPGPAHPLSSRPFSALHDFHGHILARTEENIFSHLPLHSQHLTRAPCPLIPIGGIQMVQARPGAHPTLLPGPTAAWVSGFSGGGSDLTGAREAQERGRWSPTESSSASVSPVAKVSKFTLSSELEGGDYPKERERTGGGPGRPPDWTPHGTGAPAEPTPTHSPCTPPDTLPRPPQGRRAAQSWSPRLESPRAPTNPEPSATPPLDRSSSVGCLAEASARFPARTRNLSGEPRTRQDSPKPSGSGEPRAHPHQPEDRVPPNA
"
misc_feature 1589..1741
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q5T1R4.1);
Region: ZAS1"
misc_feature 1634..1708
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/note="Zinc-finger double domain; Region: zf-H2C2_2;
pfam13465"
/db_xref="CDD:205643"
misc_feature 1646..4237
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q5T1R4.1);
Region: No DNA binding activity or transactivation
activity, but complete prevention of TRAF-dependent
NF-Kappa-B activation, associates with TRAF2 and JUN (By
similarity)"
misc_feature 1805..1876
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q5T1R4.1);
Region: Acidic 1"
misc_feature 2939..3019
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/note="C2H2-type zinc finger; Region: zf-C2H2_6;
pfam13912"
/db_xref="CDD:206083"
misc_feature 3599..3664
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q5T1R4.1);
Region: Acidic 2"
misc_feature 3722..3742
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/inference="non-experimental evidence, no additional
details recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q5T1R4.1);
Region: Nuclear localization signal (Potential)"
misc_feature 6275..6433
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q5T1R4.1);
Region: ZAS2"
misc_feature 6317..6394
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/note="Zinc-finger double domain; Region: zf-H2C2_2;
pfam13465"
/db_xref="CDD:205643"
misc_feature 6464..6631
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q5T1R4.1);
Region: Acidic 3"
misc_feature 6905..6916
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/experiment="experimental evidence, no additional details
recorded"
/note="1; propagated from UniProtKB/Swiss-Prot (Q5T1R4.1);
Region: Repetitive region"
misc_feature 6923..6934
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/experiment="experimental evidence, no additional details
recorded"
/note="2; propagated from UniProtKB/Swiss-Prot (Q5T1R4.1);
Region: Repetitive region"
misc_feature 6992..7003
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/experiment="experimental evidence, no additional details
recorded"
/note="3; propagated from UniProtKB/Swiss-Prot (Q5T1R4.1);
Region: Repetitive region"
misc_feature 7007..7018
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/experiment="experimental evidence, no additional details
recorded"
/note="4; propagated from UniProtKB/Swiss-Prot (Q5T1R4.1);
Region: Repetitive region"
variation 1118
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace="a"
/replace="g"
/db_xref="dbSNP:2146315"
variation 1449
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace="a"
/replace="t"
/db_xref="dbSNP:2181280"
variation 1942
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace="c"
/replace="t"
/db_xref="dbSNP:35798350"
variation 2344
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace="c"
/replace="g"
/db_xref="dbSNP:2475842"
variation 2452
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace="c"
/replace="t"
/db_xref="dbSNP:2984694"
variation 2794
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace="c"
/replace="t"
/db_xref="dbSNP:35586296"
variation 3097
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace="a"
/replace="g"
/db_xref="dbSNP:36086247"
variation 4993
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace="c"
/replace="t"
/db_xref="dbSNP:35624100"
variation 4999
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace="a"
/replace="g"
/db_xref="dbSNP:35784470"
variation 5714
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace="c"
/replace="t"
/db_xref="dbSNP:34970884"
variation 5737
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace="a"
/replace="g"
/db_xref="dbSNP:35730380"
exon 6077..6222
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/inference="alignment:Splign:1.39.8"
exon 6223..6398
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/inference="alignment:Splign:1.39.8"
variation 6343
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace="c"
/replace="t"
/db_xref="dbSNP:35122733"
exon 6399..6485
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/inference="alignment:Splign:1.39.8"
exon 6486..7420
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/inference="alignment:Splign:1.39.8"
variation 7082
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace="c"
/replace="g"
/db_xref="dbSNP:2483689"
variation 7341
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace="a"
/replace="c"
/db_xref="dbSNP:2991344"
exon 7421..12319
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/inference="alignment:Splign:1.39.8"
variation 10097
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace="c"
/replace="t"
/db_xref="dbSNP:2151674"
STS 10643..10865
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/standard_name="RH64713"
/db_xref="UniSTS:75322"
variation 11006
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace="c"
/replace="t"
/db_xref="dbSNP:3738577"
STS 11477..11607
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/standard_name="RH79040"
/db_xref="UniSTS:64983"
STS 11528..11722
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/standard_name="SHGC-74654"
/db_xref="UniSTS:59887"
variation 11579
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace="a"
/replace="g"
/db_xref="dbSNP:11550923"
variation 11796
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace=""
/replace="aaaag"
/db_xref="dbSNP:71062591"
variation 11797..11801
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace=""
/replace="aaacg"
/db_xref="dbSNP:3841837"
STS 11944..12041
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/standard_name="SHGC-74661"
/db_xref="UniSTS:8905"
variation 12072
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
/replace="a"
/replace="g"
/db_xref="dbSNP:1127985"
polyA_signal 12296..12301
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
polyA_site 12319
/gene="HIVEP3"
/gene_synonym="KBP-1; KBP1; KRC; Schnurri-3; SHN3; ZAS3;
ZNF40C"
ORIGIN
ctcacaaccagccgactctcccattatccagctgcctagtttggtgcttcaatgtacatggctattccgtgtgcatatgtgtgtatacaaacacgcatgcatgcctggatggacatacgtatgcacaggttattttttaaggacaattctttcaataaggtctttaccccttacttgaaacaggtgttcatgaaaaaaatgcacaaaatcctgcctggccggaataattcatgaagaaggggctggatccgtgggtcagagaacacaggaccagtttgccatcccaaggccgaaggattcgaggcacaaacccagcagcctcaacctagttcatggaggagcctcgcggggtcctggccaagcaagcccgcccctctggtgggaagagcggcgcctaggtggagggtggctgccgtaggagtggacatgaatgctggctttcagagagaacagcgtttcagttttggtcatcggaagtggtgccttcagcacagaagaagagcgtgatttctcctccaaggccgttgatctccaacccagaactaaaggggagaagagccacccccagcatccagcgtggcatctcttgtgccaggaccagggatgactgggccatggacacagatgtctccaaccttcaaccgtttgcatagcacacgggggactcgtgggggccacctgccactgccagctgaaacaatacaatggcaatactgacatccttcatgacgttttcccgacagacattcaggcagaaagtgctggtgcgttttctgtctgcaaagtagagggccatgcctcaccaatagaatagcgtgggccctgatgacctgctccgagtccactcacagccagtgacacttgcaaaaaactcccaaagccgtcttgggtttggctcccacagctcttgaccaatgtggccaaagctggacacctccttgggacactgggattattcataaatgcagcccgccctgactctccctgaatagcatctgaagtctttgtgaaggtcatggatcctgaacaaagtgtcaagggcaccaagaaggctgagggaagtccccggaagcggctgaccaaaggagaggccattcagaccagtgtttcttccagcgtcccatacccaggcagcggcacagctgccacccaagagagccccgcccaagagctcttagccccgcagcccttcccgggcccctcatcagttcttagggaaggctctcaggagaaaacgggccagcagcagaagccccccaaaaggccccccatcgaagcatccgtccacatctcacagcttccgcagcaccctctgacaccagcattcatgtcgcctggcaaacctgagcatctcctggaggggtccacatggcaactggttgaccccatgagacctggaccctctggctccttcgtggcccctgggctccatcctcagagccagctccttccttcccacgcttccatcattccccccgaggaccttcctggagtccccaaagtcttcgtgcctcgtccttcccaggtctccttgaagcccacagaagaggcacacaagaaggagaggaagccccagaagccaggcaagtacatctgccagtactgcagccggccctgtgccaagcccagcgtgctccagaagcacattcgctcacacacaggtgagaggccctacccctgcggcccctgtggcttctccttcaagaccaagagtaatctctacaagcacaggaagtcccatgcccaccgcatcaaagcaggcctggcctcaggcatgggtggcgagatgtacccacatgggctggagatggagcggatccctggggaagagtttgaggagcccactgagggagaaagcacagattctgaagaggagactagtgccacctctggtcaccctgcagagctctccccaagacccaagcagccccttctctccagcgggctatacagctctgggagccacagttccagccacgaacgctgttccctgtcccagtccagcacagcccagtcactcgaagacccccctccatttgtggaaccctcatctgagcaccccctgagccataaacctgaagacacccacacgattaagcagaagctggccctccgcttaagcgagaggaagaaggtgatcgatgagcaggcgtttctgagcccaggcagcaaagggagtactgagtctgggtatttctctcgctccgagagtgcagagcagcaggtcagccccccaaacaccaacgccaagtcctacgctgagatcatctttggcaagtgtgggcgaataggacagcggaccgccatgctgacagccacctccacccagcccctcctgcccctgtccaccgaagacaagcccagcctggtgcctttgtctgtaccccggacgcaggtgatcgagcacatcacgaagctcatcaccatcaacgaggccgtggtggacaccagcgagatcgacagcgtgaagccaaggcggagctcactgtccaggcgcagcagcatggagtccccaaaatccagcctctaccgggagcccctgtcatcccacagtgagaaaaccaagcctgaacaatcactgctgagcctccagcacccgcccagtaccgccccccctgtgcctctcctgagaagccactcaatgccttctgccgcctgcactatcagcaccccccaccaccccttccgaggtagctactccttcgatgaccatatcaccgactccgaagccctgagccacagcagtcacgtgtttacctcccacccccggatgctgaagcgccagccggcaatcgaattacctttgggaggggaatacagttctgaggagcctggcccaagcagcaaagacacagcctccaagccctcggacgaagtggaacccaaggaaagcgagcttaccaaaaagaccaagaagggtttgaaaacaaaaggggtgatctacgaatgtaacatatgtggtgctcggtacaagaaaagggataactacgaagcccacaaaaaatactactgctcagagcttcagatcgcaaagcccatctctgcaggcacccacacatctccagaagctgaaaagagtcagattgagcatgagccgtggtcccaaatgatgcattacaaactgggaaccaccctggaactcactccactgaggaagaggaggaaagagaagagccttggggacgaggaagagccacctgcctttgagtccacaaaaagtcagtttggcagccccgggccatctgatgctgctcggaaccttcccctggagtccaccaagtcaccagcagaaccaagtaaatcagtgccctccttggagggacccacgggcttccagccaaggactcccaagccagggtccggttcagaatcagggaaggagaggagaacaacgtccaaagaaatttctgtcatccagcacaccagctcctttgagaaatctgattctctcgagcagccgagtggcttggaaggggaagacaaacctctggcccagttcccatcacccccacctgccccacacggacgctctgctcactccctgcagcctaagttggtccgccagcccaacattcaggttcctgagatcctagtaactgaggagcctgaccggccggacacagagccagagccgccccctaaggaacctgagaagactgaggagttccaatggccccagcgcagccagacacttgcccagctcccagctgagaagctgccacccaaaaagaagaggttgcgcctggcagagatggcccaatcatcaggggagtccagcttcgagtcctctgtgcctctgtctcgcagcccgagccaggaaagcaatgtctctttgagtgggtccagccgctcagcctcgtttgagagggatgaccatgggaaagccgaggcccccagtccctcatctgacatgcgccccaaacccctgggcacccacatgttgactgtccccagccaccacccacatgcccgagagatgcggaggtcagcctcagagcagagccccaacgtttcccattctgcccacatgaccgagacacgcagcaaatcctttgactatggcagcttgtccttgacaggcccttctgctccagccccagtggctccaccagcgcgggtggccccgccagagagaagaaaatgcttcttggtgagacaggcctctctgagcaggcctccagaatctgagttggaggttgcccccaagggaagacaggagagcgaagaaccacagccctcatccagtaaaccctctgccaaaagctcattgtcccagatttcctctgcggccacctcacatggtggacccccgggaggcaagggcccagggcaggacaggcccccattggggcccactgtgccctacacagaagcactgcaagtgttccaccaccccgttgcccagacacccctgcatgagaagccatacctgcccccaccagtctcccttttctccttccagcatctcgtgcagcatgagccaggacagtctccagaattcttctccacccaggccatgtccagcctcctgtcctcaccatactccatgcccccacttcctccctccttatttcaagccccaccgcttcctctccagcctactgttctgcacccaggccaactccatctcccccagctcatgcctcacccagccaacatccccttcaggcagcccccttccttcctccccatgccatacccgacctcctcagcactgtcttctgggtttttcctgcctctgcaatcccagtttgcacttcagctccctggtgatgtggaaagccatctgccccagatcaaaaccagcctggccccactggcaacaggaagtgctggcctctcccccagcacagagtacagcagtgacatccggctaccccctgtggctcccccagccagctcctcagcacctacatcagctcctccactggccctgcctgcctgtccagacaccatggtgtccctggttgtgcctgtccgtgttcagaccaatatgccgtcctatgggagcgcaatgtacaccaccctttcccagatcttggtcacccagtcccaaggcagctcagcaactgtggcacttcccaagtttgaggaacccccatcaaaggggacgactgtatgtggtgcagatgtgcatgaggttgggcccggcccttctgggttaagtgaagagcaaagcagagctttcccaactccatacctgagagtgcctgtgacattacctgaaagaaaaggcacttccctgtcatcagagagtatcttgagcctggaggggagttcatcaacagcagggggaagcaaacgtgtcctttcaccagctggcagccttgaacttaccatggaaacccagcagcaaaaaagagtgaaggaggaggaggcttccaaggcagatgaaaaacttgagctggtaaaaccatgcagtgtggtccttaccagcaccgaggatgggaagaggccagagaaatcccacttaggcaaccagggccaaggcaggagggagctagaaatgctgtccagcctgtcctcagatccatctgacacaaaggaaattcctcccctccctcaccctgcattgtcccatgggacagccccaggctcagaagctttgaaggaatatccccagccatctggcaaacctcaccgaagagggttgaccccactgagcgtgaagaaagaagattccaaggaacaacctgatctcccctccttggcacctccgagctctctgcctctgtcagaaacgtcctccagaccagccaagtcacaagaaggtacggactcaaagaaggtactgcagttccccagcctccacacaaccactaatgtcagttggtgctatttaaactacattaagccaaatcacatccagcatgcagataggaggtcctctgtttacgctggttggtgcataagtttgtacaaccccaaccttccgggggtttccactaaagctgctttgtccctcctgaggtctaagcagaaagtgagcaaagagacatacaccatggccacagctccgcatcctgaggcaggaaggcttgtgccatccagctcccgcaagccccgcatgacagaggttcacctcccttcactggtttccccggaaggccagaaagatctagctagagtggagaaggaagaagagaggagaggggagccggaggaggatgctcctgcctcccagagaggggagccggcgaggatcaaaatcttcgaaggagggtacaaatcaaacgaagagtatgtatatgtgcgaggccgcggccgagggaaatatgtttgtgaggagtgtggaattcgctgcaagaagcccagcatgctgaagaaacacatccgcacccacactgacgtccggccctatgtgtgcaagcactgtcactttgcttttaaaaccaaagggaatctgactaagcacatgaagtcgaaggcccacagcaaaaagtgccaagagacaggggtgctggaggagctggaagccgaagaaggaaccagtgacgacctgttccaggactcggaaggacgagagggttcagaggctgtggaggagcaccagttttcggacctggaggactcggactcagactcagacctggacgaagacgaggatgaggatgaggaggagagccaggatgagctgtccagaccatcctcagaggcgcccccgcctggcccaccacatgcactgcgggcagactcctcacccatcctgggccctcagcccccagatgcccccgcctctggcacggaggctacacgaggcagctcggtctcggaagctgagcgcctgacagccagcagctgctccatgtccagccagagcatgccgggcctcccctggctgggaccggcccctctgggctctgtggagaaagacacaggctcagccttgagctacaagcctgtgtccccaagaagaccgtggtccccaagcaaagaagcaggcagccgtccaccactagcccgcaaacactcgctaaccaaaaacgactcatctccccagcgatgctccccggcccgagaaccacaggcctcagccccaagcccacctggcctgcacgtggacccaggaaggggcatgggcgctctcccttgtgggtctccaagacttcagctgtctcctctcaccctctgccccctgggaagagaactggcccctcgagcacatgtgctctccaaactcgagggtaccaccgacccaggcctccccagatactcgcccaccaggagatggtctccaggtcaggccgagtcaccaccacggtcagcgccgccagggaagtgggccttggctgggccgggcagcccctcagcgggggagcatggcccaggcttggggctggacccacgggttctcttcccgcccgcgcctctacctcacaagctcctcagcagaagcccagagacctgcgcctccccgtggaaggccgagtcccgaagtccctcctgctcacccggccctgctcatcctctctcctcccgacccttctccgccctccatgacttccacggccacatcctggcccggacagaggagaacatcttcagccacctgcctctgcactcccagcacttgacccgtgccccatgtcccttgattcccatcggtgggatccagatggtgcaggcccggccaggagcccaccccaccctgctgccagggcccaccgcagcctgggtcagtggcttctccgggggtggcagcgacctgacaggggcccgggaggcccaggagcgaggccgctggagtcccactgagagctcgtcagcctccgtgtcgcctgtggctaaggtctccaaattcacactctcctcagagctggagggcggggactaccccaaggagagggagaggaccggcggaggcccgggcaggcctcctgactggacaccccatgggaccggggcacctgcagagcccacacccacgcacagcccctgcaccccacccgacaccttgccccggccgccccagggacgccgggcagcgcagtcctggagcccccgcttggagtccccgcgtgcaccgaccaaccccgagccttctgccaccccgccgctggaccgcagcagctctgtgggctgcctggcagaggcctctgcccgcttcccagcccggacgaggaacctctccggggaacccaggaccaggcaggactcccccaagccctcaggaagtggggagcccagggcacatccacatcagcctgaggacagggttccccccaacgcttagcctctctccaactgcttcagcatctggcttccagtgtccagcaacagacgtttccagccactttcctcgaatcatcccacttcctcagccccatctgtccctccgtccaggagctctcacggccccatctgttgtaccttcccatgtatgcagttacctgtgcctttttctacaccttttgttgcttaaaaagaaacaaaacaaatcacatacatacatttaaaaaaaaaacaacaacccacgaggagtctgaggctgtgaatagtttatggttttggggaaaggctgatggtgaagcctcctgaccctccccgctgtggttggcagccacccaccccagaggctggcagagggaaaggggtacactgagggagaaaggaaaaggaaacttcaaacaatatagaattaaatgtaaaaggaagcactcctgtgtacagatgcgatcaaggttcctgtttattgccacttcacccccctgcccagctcgtagccacccctctctgccagcagaaaggccagtgtccccaggcagaggggcacaaacacaggcaggtgacccccacccaggccccagcaggcaggcccagaaaaactaatcttttccttttttttttttttttttttttttgcaagaaaataaaatgatacttttcctaggatttcaacacaaaataataggtgcaggtagaaggaggagggctggctccccaagggctcctggatactctggtagtctgagtcatgggcccatcctggcactccacaggtgggcaggccaccccacccacgcacccccactccagacacctcccttctgcaccccaccctggccccctgggctggggaaggagccctgactgtccgtccctggctcccaagcccctgaccgaggcctcactctcctgttgcctcctctgttctaaaaccaccaaaccacccacaaaggcagaagtggcagggcccgagccctagcggccgttcctgagactgggttttgggttttgtttcatcttggtccctggggtacaagggagcctgttcccctcatggctgggtttttccagttctccacagcagaggtttgcggggaactgtttcaggaccactttgccacaggaccgtttccccccgtccctgcccctgtctccactaccccaaggaaatacccacaactgtggctggtggatacggcctggacctgtttgctgtcttacacctcttttttaaaaagagagaggatggtgtttgatacttcacccagccaccacagattcttttgacctagaggatttttgaattgtcctaactcgttggaattctccaaagcaatcagtgtgagccagtgcctcttccttacccacatctctactttcaagaagctgccctgcatttcctggggcaaaactctactttgtaagaaaaataataggaccagaaatttaaatcccaaattgaactatggaacttgaactctagcgtgttcgccccaactgggagaggtgagctttttcccagtgtttcagaactgattttctttactttctacaagggagggcagcacagggactacggttgaggcccgtgaaggctgggtttgatgccaccctatacagagcagggacctctctggctaatccccagtcctcagccaggctgtgtgaatcaagtgcctgccccagggctcttgagctattgaagctgcttgggtacaggacacagtaggtggggagggttaagacccttctgtgagttccctgtgcggggctgtacttgcctcttccaattcgtggcctttccctgcttggtccctactagacagacaaaccagccacagtccagcctgcagccagaccaccttgttcactcattctcctttgcctcagagctaagacaaaaatgagacagaaggcagggctccctgggagtccactgtgctccagggttctggggaatcagggttagccagcagctcctggctgcttccctcagagactagggctctcatcctccccaagagaagcagcaagcccagcctggaccacactgtccatattgctggacagtggcctgacagaaagtgactcctccaagtcccaggaggccagggcttttctcatccttgcctttcagccctaacccatgggactgcccacggattggagacttcaagggctgaggtctgggagctgcataaagggcattgcttcagcccaggttagaaatctgcctgggcaagctcttcctgccccagacctacaaagcagcagaccgggggctctggtggactagcccctgacattggtggggggccccacaccactccaccccaccctgccttccagctctcctgggcatttttctccctgtactcaaacagcctacccacccaaggtttcctccctgggcagcctagcaatgaacagtgcagccggcagggcagaggcccggcagtcaccgggcccgtcaggctcaggcagagaagccacaggggccaggagtcactggagactatttctaaatgatgggggtaaatgcacaaatagaatctcaccaaagggctgcctccacattgatgccgtgcccagagggacagaaccaatgccaccagcctgggtatatgtcactgggcacagctctaaccccctcctccggactctagtcccgctcctctgcgcacagagcccccagcccacaggtacaccttcatgatttggagaaagacgctcgccccatgcacgccctcctctgggccttctgccctgctcccagtcacttccaagcttcctgtttgcctgtgatgttattgtgcctgttgagggaagcagcagaggaggcagtggctgacttggcacagatgcctgctacgtgctctgttgaaatgcgcggggtggccattcctcggtacagactagtcctggtccttgggtgtgggcagtgggggaggaaccaactggtcgaggtttcagagccaaaccttgcctttggttggtgagtccttgccccccaggcctgcgctccacgatgcctttcacccttggcaatctcagggccatcctgggtagtaaccccactcctctctgctcccgcccgcacctgtggctctcactctgggctcaacccctgcaaccctccaggagcccgacagcagccagctgcctgcactgtcgcctccgtaagctccaacttccagacccagaagtccctctgcttccctctgttggaaaaagcctaaaagaattagcttccagattcctctagcccctgctccattcccacccagtccttctgaagaggaatgagcaatacatctgagctggatttctctctagtcctttctccagacaaatccttcttaaagcaaaagtcctggctgagcacctgtccttggggaccgatctgccgtgtgaccaggggaagaaagttcccgaaagcctgttccaccaattctgcttctgtgttgtgaatccagtctgctttccattagaaaaccgcttcggcacttatggtcactttaataaatctagtatgtaaaaaaagaaagaaagaaaagaaacagaaaaaagaaacgtgcaggcaaatgtaaaatacaatgctctctgtaagataaatatttgcctttttttctaaaaggtgtacgtattctgtatgtgaaattgtctgtagaaagtttctatgttcttaaatggcaatacattccaaaaattgtactgtagatatgtacagcaaccgcactgggatggggtagttttgcctgtaattttatttaaactccagtttccacacttgcatcttgcaatgttggtatggtatatatcagtgcaaaagaaaaaacaaaacagaaacaaacaaaaaaaaaaaacaaaaatccacgcaggtctaaagcacagagtctgacgtacaaaaggaaaaatgctcagtattgatgtgtgtgacctttgttgtaaattacatctgtactgtgaatgagaagtttttacaagtataataattgcctttattacagctctggctgagtgttcagcctgaggatattttttaaaaaaaaaagaattagcatgttggaataaatttgaaaatcccaacataaaaaaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:59269 -> Molecular function: GO:0003677 [DNA binding] evidence: IEA
GeneID:59269 -> Molecular function: GO:0046872 [metal ion binding] evidence: IEA
GeneID:59269 -> Biological process: GO:0006351 [transcription, DNA-dependent] evidence: IEA
GeneID:59269 -> Biological process: GO:0035914 [skeletal muscle cell differentiation] evidence: IEA
GeneID:59269 -> Biological process: GO:0045893 [positive regulation of transcription, DNA-dependent] evidence: IDA
GeneID:59269 -> Cellular component: GO:0005634 [nucleus] evidence: IEA
GeneID:59269 -> Cellular component: GO:0005737 [cytoplasm] evidence: IEA
by
@meso_cacase at
DBCLS
This page is licensed under a Creative Commons Attribution 2.1 Japan License.