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2024-04-24 07:22:34, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_001111020 3734 bp mRNA linear PRI 17-APR-2013
DEFINITION Homo sapiens suppressor of Ty 5 homolog (S. cerevisiae) (SUPT5H),
transcript variant 2, mRNA.
ACCESSION NM_001111020
VERSION NM_001111020.2 GI:195546898
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3734)
AUTHORS Diamant,G., Amir-Zilberstein,L., Yamaguchi,Y., Handa,H. and
Dikstein,R.
TITLE DSIF restricts NF-kappaB signaling by coordinating elongation with
mRNA processing of negative feedback genes
JOURNAL Cell Rep 2 (4), 722-731 (2012)
PUBMED 23041311
REMARK GeneRIF: DSIF Is Selectively Required for mRNA Splicing and Export
of NF-kappaB Target Genes.
REFERENCE 2 (bases 1 to 3734)
AUTHORS Wenzel,S., Martins,B.M., Rosch,P. and Wohrl,B.M.
TITLE Crystal structure of the human transcription elongation factor DSIF
hSpt4 subunit in complex with the hSpt5 dimerization interface
JOURNAL Biochem. J. 425 (2), 373-380 (2010)
PUBMED 19860741
REMARK GeneRIF: crystal structure of hSpt4 in complex with the
dimerization region of hSpt5
Publication Status: Online-Only
REFERENCE 3 (bases 1 to 3734)
AUTHORS Chen,Y., Yamaguchi,Y., Tsugeno,Y., Yamamoto,J., Yamada,T.,
Nakamura,M., Hisatake,K. and Handa,H.
TITLE DSIF, the Paf1 complex, and Tat-SF1 have nonredundant, cooperative
roles in RNA polymerase II elongation
JOURNAL Genes Dev. 23 (23), 2765-2777 (2009)
PUBMED 19952111
REMARK GeneRIF: he Paf1 complex (Paf1C) and Tat-SF1, two factors
implicated previously in elongation control, collaborate with DSIF
to facilitate efficient elongation
REFERENCE 4 (bases 1 to 3734)
AUTHORS Komori,T., Inukai,N., Yamada,T., Yamaguchi,Y. and Handa,H.
TITLE Role of human transcription elongation factor DSIF in the
suppression of senescence and apoptosis
JOURNAL Genes Cells 14 (3), 343-354 (2009)
PUBMED 19210550
REMARK GeneRIF: These results suggest that one of the functions of Spt5 is
to suppress senescence and apoptosis, and that this function is
exerted through its association with Spt4 and Pol II.
REFERENCE 5 (bases 1 to 3734)
AUTHORS Chen,H., Contreras,X., Yamaguchi,Y., Handa,H., Peterlin,B.M. and
Guo,S.
TITLE Repression of RNA polymerase II elongation in vivo is critically
dependent on the C-terminus of Spt5
JOURNAL PLoS ONE 4 (9), E6918 (2009)
PUBMED 19742326
REMARK GeneRIF: RNA polymerase II elongation repression is critically
dependent on the C-terminus of Spt5
Publication Status: Online-Only
REFERENCE 6 (bases 1 to 3734)
AUTHORS Yamada-Okabe,T., Doi,R., Shimmi,O., Arisawa,M. and Yamada-Okabe,H.
TITLE Isolation and characterization of a human cDNA for mRNA 5'-capping
enzyme
JOURNAL Nucleic Acids Res. 26 (7), 1700-1706 (1998)
PUBMED 9512541
REFERENCE 7 (bases 1 to 3734)
AUTHORS Wu-Baer,F., Lane,W.S. and Gaynor,R.B.
TITLE Role of the human homolog of the yeast transcription factor SPT5 in
HIV-1 Tat-activation
JOURNAL J. Mol. Biol. 277 (2), 179-197 (1998)
PUBMED 9514752
REFERENCE 8 (bases 1 to 3734)
AUTHORS Wada,T., Takagi,T., Yamaguchi,Y., Ferdous,A., Imai,T., Hirose,S.,
Sugimoto,S., Yano,K., Hartzog,G.A., Winston,F., Buratowski,S. and
Handa,H.
TITLE DSIF, a novel transcription elongation factor that regulates RNA
polymerase II processivity, is composed of human Spt4 and Spt5
homologs
JOURNAL Genes Dev. 12 (3), 343-356 (1998)
PUBMED 9450929
REFERENCE 9 (bases 1 to 3734)
AUTHORS Stachora,A.A., Schafer,R.E., Pohlmeier,M., Maier,G. and
Ponstingl,H.
TITLE Human Supt5h protein, a putative modulator of chromatin structure,
is reversibly phosphorylated in mitosis
JOURNAL FEBS Lett. 409 (1), 74-78 (1997)
PUBMED 9199507
REFERENCE 10 (bases 1 to 3734)
AUTHORS Chiang,P.W., Fogel,E., Jackson,C.L., Lieuallen,K., Lennon,G.,
Qu,X., Wang,S.Q. and Kurnit,D.M.
TITLE Isolation, sequencing, and mapping of the human homologue of the
yeast transcription factor, SPT5
JOURNAL Genomics 38 (3), 421-424 (1996)
PUBMED 8975720
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
DB097498.1 and AF040253.1.
On Aug 5, 2008 this sequence version replaced gi:161169022.
Transcript Variant: This variant (2) differs in the 5' UTR compared
to variant 1. Variants 1, 2, and 3 all encode the same isoform (a).
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: AB000516.1, Y12790.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
ERS025081, ERS025082 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-573 DB097498.1 1-573
574-3734 AF040253.1 602-3762
FEATURES Location/Qualifiers
source 1..3734
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="19"
/map="19q13"
gene 1..3734
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/note="suppressor of Ty 5 homolog (S. cerevisiae)"
/db_xref="GeneID:6829"
/db_xref="HGNC:11469"
/db_xref="MIM:602102"
exon 1..92
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 58
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="g"
/db_xref="dbSNP:367645411"
variation 83
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="c"
/db_xref="dbSNP:62120665"
variation 88
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:114862556"
exon 93..254
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 142
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="c"
/db_xref="dbSNP:370102876"
variation 151
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1932"
variation 153
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="t"
/db_xref="dbSNP:147429173"
variation 173
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="g"
/db_xref="dbSNP:139805560"
CDS 180..3443
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/note="isoform a is encoded by transcript variant 2;
transcription elongation factor SPT5; DRB
sensitivity-inducing factor large subunit;
Tat-cotransactivator 1 protein; DSIF large subunit; DSIF
p160; hSPT5; DRB sensitivity-inducing factor 160 kDa
subunit"
/codon_start=1
/product="transcription elongation factor SPT5 isoform a"
/protein_id="NP_001104490.1"
/db_xref="GI:161169023"
/db_xref="CCDS:CCDS12536.1"
/db_xref="GeneID:6829"
/db_xref="HGNC:11469"
/db_xref="MIM:602102"
/translation="
MSDSEDSNFSEEEDSERSSDGEEAEVDEERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEEDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRSGARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLWTVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIEGVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQNTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLIFEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNFQPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELVQLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIVKVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVGGFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSPGGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSEKVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRFLGKLLEA
"
misc_feature 468..695
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/note="Spt5 transcription elongation factor, acidic
N-terminal; Region: Spt5_N; pfam11942"
/db_xref="CDD:204790"
misc_feature 702..1127
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/note="transcription antitermination protein NusG;
Validated; Region: nusG; PRK08559"
/db_xref="CDD:181467"
misc_feature 705..989
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (O00267.1);
Region: Interaction with SUPT4H1"
misc_feature 711..974
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/note="Eukaryotic N-Utilization Substance G (NusG)
N-terminal (NGN) domain, including plant KTF1 (KOW
domain-containing Transcription Factor 1); Region:
NGN_Euk; cd09888"
/db_xref="CDD:193577"
misc_feature order(747..749,756..761,765..773,777..779,789..791,
813..830,861..863,867..869,957..962,969..971)
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/note="heterodimer interface [polypeptide binding]; other
site"
/db_xref="CDD:193577"
misc_feature 1116..1439
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (O00267.1);
Region: Interaction with RNA polymerase II"
misc_feature 1590..1673
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/note="KOW (Kyprides, Ouzounis, Woese) motif; Region: KOW;
smart00739"
/db_xref="CDD:128978"
misc_feature 2175..2177
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphoserine; propagated from UniProtKB/Swiss-Prot
(O00267.1); phosphorylation site"
misc_feature 2220..2222
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/experiment="experimental evidence, no additional details
recorded"
/note="Asymmetric dimethylarginine, by PRMT1, alternate;
Omega-N-methylarginine, by PRMT1, alternate; propagated
from UniProtKB/Swiss-Prot (O00267.1); methylation site"
misc_feature 2265..2267
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/experiment="experimental evidence, no additional details
recorded"
/note="Asymmetric dimethylarginine, by PRMT1, alternate;
Omega-N-methylarginine, by PRMT1, alternate; propagated
from UniProtKB/Swiss-Prot (O00267.1); methylation site"
misc_feature 2271..2273
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/experiment="experimental evidence, no additional details
recorded"
/note="Asymmetric dimethylarginine, by PRMT1, alternate;
Omega-N-methylarginine, by PRMT1 and PRMT5, alternate;
Symmetric dimethylarginine, by PRMT5, alternate;
propagated from UniProtKB/Swiss-Prot (O00267.1);
methylation site"
misc_feature 2295..2390
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/note="KOW motif; Region: KOW; pfam00467"
/db_xref="CDD:144165"
misc_feature 2439..2630
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (O00267.1);
Region: 9 X 7 AA approximate tandem repeats of
G-S-[QR]-T-P-X-[YQ], motif CTR1"
misc_feature 2454..2846
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/note="Spt5 C-terminal nonapeptide repeat binding Spt4;
Region: CTD; smart01104"
/db_xref="CDD:198172"
misc_feature 2493..2834
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/note="Spt5 C-terminal nonapeptide repeat binding Spt4;
Region: CTD; pfam12815"
/db_xref="CDD:193291"
misc_feature 2502..2504
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphothreonine, by CDK9; propagated from
UniProtKB/Swiss-Prot (O00267.1); phosphorylation site"
misc_feature 2529..2531
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphothreonine, by CDK9; propagated from
UniProtKB/Swiss-Prot (O00267.1); phosphorylation site"
misc_feature 2709..3029
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (O00267.1);
Region: 10 X 8 AA approximate tandem repeats of
P-[TS]-P-S-P-[QA]-[SG]-Y, motif CTR2"
misc_feature 2925..>3059
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/note="DAZ associated protein 2 (DAZAP2); Region: DAZAP2;
pfam11029"
/db_xref="CDD:192699"
misc_feature 3279..3281
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/experiment="experimental evidence, no additional details
recorded"
/note="Phosphothreonine; propagated from
UniProtKB/Swiss-Prot (O00267.1); phosphorylation site"
variation 252
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:11549716"
exon 255..420
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 258
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:76377604"
variation 260
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:200510680"
variation 268
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:373417384"
variation 269
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:147853831"
variation 280
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:141419838"
variation 322
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="t"
/db_xref="dbSNP:138303744"
variation 341
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1130180"
variation 356
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:11549715"
variation 383
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:372598922"
variation 419
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:150982724"
exon 421..486
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 477
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:199661076"
exon 487..498
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
exon 499..568
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 509
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:140519829"
variation 542
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:374529937"
exon 569..637
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
exon 638..703
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 638
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:377321812"
variation 659
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:370828040"
variation 668
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:374886918"
exon 704..734
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 712
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:374742976"
variation 714
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:142546168"
variation 721
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1130184"
exon 735..803
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 755
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:138272578"
variation 759
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:142786035"
variation 771
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:190306198"
variation 794
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:144952178"
exon 804..1055
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 806
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:145672197"
variation 809
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="g"
/replace="t"
/db_xref="dbSNP:369405177"
variation 821
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:201994494"
variation 848
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:373628365"
variation 869
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:376748613"
variation 881
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:2304216"
variation 899
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:2304217"
variation 906
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:74659452"
variation 944
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:113643897"
variation 965
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:144812104"
variation 1009
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:148558086"
exon 1056..1145
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 1118
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:377555614"
variation 1120
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="t"
/db_xref="dbSNP:375020910"
variation 1145
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="g"
/db_xref="dbSNP:368395961"
exon 1146..1216
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 1160
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:371289168"
variation 1164
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="c"
/db_xref="dbSNP:138968183"
variation 1179
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:193164075"
variation 1187
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="c"
/db_xref="dbSNP:147171840"
variation 1194
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:201669270"
variation 1199
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:374836069"
exon 1217..1322
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 1223
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:140361350"
variation 1253
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:371750041"
variation 1277
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:373667990"
variation 1307
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:200823105"
exon 1323..1416
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 1328
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:201704374"
variation 1349
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="g"
/db_xref="dbSNP:144234640"
exon 1417..1553
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 1425
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:370618161"
variation 1454
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:200298677"
variation 1478
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:147765614"
exon 1554..1709
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 1607
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:139224827"
variation 1640
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:200586578"
variation 1659
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:370747849"
variation 1661
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:374396860"
variation 1677
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:149954660"
exon 1710..1856
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 1748
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:200763038"
variation 1817
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:201628118"
exon 1857..2003
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 1932
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:145047239"
exon 2004..2129
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 2043
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:374491321"
variation 2075..2076
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace=""
/replace="g"
/db_xref="dbSNP:35972324"
variation 2099
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:370183625"
variation 2102
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:374531341"
exon 2130..2214
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 2168
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:149086773"
exon 2215..2334
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 2223
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="g"
/db_xref="dbSNP:143117789"
variation 2249
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="g"
/db_xref="dbSNP:200417328"
variation 2298
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:370538069"
variation 2306
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:146582409"
variation 2310
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:201354316"
exon 2335..2437
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
exon 2438..2565
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 2444
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:201354133"
variation 2448
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:34605227"
variation 2482
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:185388887"
variation 2483
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:374930575"
variation 2487
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:373018045"
STS 2508..2608
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/standard_name="RH124224"
/db_xref="UniSTS:161046"
variation 2540
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:199787370"
variation 2546
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="c"
/db_xref="dbSNP:145017682"
variation 2549
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="g"
/db_xref="dbSNP:377355322"
variation 2552
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:138813059"
variation 2558
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:369798301"
exon 2566..2671
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 2576
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:141599017"
variation 2588
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="c"
/db_xref="dbSNP:1130189"
variation 2597
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:150486012"
variation 2665
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:368525453"
exon 2672..2830
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 2678
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="g"
/db_xref="dbSNP:367892448"
variation 2711
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:369242189"
variation 2720
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:373271291"
variation 2744
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:372147816"
variation 2759
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="t"
/db_xref="dbSNP:201684544"
variation 2807
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:375461912"
variation 2813
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="g"
/replace="t"
/db_xref="dbSNP:201178144"
variation 2824
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:369717101"
exon 2831..2999
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 2924
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:201982169"
variation 2957
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:199752896"
variation 2972
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:373413289"
variation 2981
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:376597898"
exon 3000..3203
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 3036
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:367965773"
variation 3080
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:138311423"
variation 3095
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:184672474"
variation 3098
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="g"
/replace="t"
/db_xref="dbSNP:149618269"
variation 3145
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:371480690"
variation 3153
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:376076668"
exon 3204..3299
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 3215
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:368195530"
variation 3230
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:80027112"
exon 3300..3714
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/inference="alignment:Splign:1.39.8"
variation 3317
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:147294122"
variation 3326
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:138749129"
variation 3334
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:377048747"
STS 3436..3613
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/standard_name="RH80839"
/db_xref="UniSTS:84101"
variation 3456
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:370377623"
variation 3469
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:199949033"
variation 3512
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="g"
/db_xref="dbSNP:140497447"
variation 3540
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:191012153"
variation 3595
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="c"
/db_xref="dbSNP:182803081"
variation 3605
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:78472811"
variation 3609
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:113966352"
variation 3612
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1048912"
variation 3623
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1048917"
variation 3624..3625
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace=""
/replace="g"
/db_xref="dbSNP:34757180"
variation 3629
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="g"
/replace="t"
/db_xref="dbSNP:1802184"
variation 3639
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="c"
/db_xref="dbSNP:1048918"
variation 3657
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:147792413"
variation 3686
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="c"
/replace="t"
/db_xref="dbSNP:1802185"
variation 3689
/gene="SUPT5H"
/gene_synonym="SPT5; SPT5H; Tat-CT1"
/replace="a"
/replace="g"
/db_xref="dbSNP:367984226"
ORIGIN
aacgggtaggttctcgcgagaggacccgtcagccccagtcaggcgtcgtgcgaacagcagctggtaccgaaggcggaggtggagcccgagagggaaccagcggggaaactgaggctcggggtggagcgcaggattgtgggacgcgccaaggctgctgtctttcccagcagcagcggaagatgtcggacagcgaggacagcaacttttccgaggaggaggacagcgagcgcagcagtgacggcgaggaggccgaggtagacgaagagcggcggagtgcagcgggcagtgagaaagaagaagagcctgaggacgaagaggaggaggaagaggaggaggaatacgatgaggaagaggaggaagaagatgatgaccgaccccccaagaaaccccgccatggaggcttcattctggacgaggctgatgttgacgatgagtatgaggacgaggaccagtgggaggatggagcagaggacattctagagaaagaagagattgaagcctccaatatcgataatgttgtcctggatgaagatcgttctggggctcgccgcctgcaaaacctctggagggaccagcgagaagaagaactgggcgagtattacatgaagaaatacgccaagtcatctgtgggagagacggtgtatggaggatctgatgagctctcagacgacatcacccagcagcagctgctcccaggagtcaaggatcccaatctgtggactgtcaaatgtaagattggggaggaacgggccacggccatttccttgatgcgcaagttcattgcctaccagttcacagacacgcccctgcagatcaagtcagtagtggcaccagagcatgtgaagggctacatctacgtggaggcctacaagcagacccacgtgaagcaggccattgagggggtgggcaacctgcggcttggctactggaaccagcagatggtgcccatcaaggagatgacagacgtgctcaaagtggtgaaggaggtggccaacctgaaaccaaagtcctgggtccgcctcaagcggggcatctacaaggatgacattgctcaggtggactacgtggagcccagccagaacaccatctccctgaagatgatcccacgcatcgactacgatcgcatcaaggcccgcatgagcttgaaagactggtttgccaaaaggaagaagtttaagcggcctccacagaggctgtttgatgctgagaagatcaggtccctggggggtgatgttgcctctgatggtgacttcctcatctttgaggggaaccgttacagccggaagggctttctgttcaagagcttcgccatgtctgctgtgatcacggagggtgtgaagccaacactctctgagctggaaaagtttgaggaccagccagagggcattgacctggaggtggtgactgagagcacagggaaggagcgggagcacaacttccaacctggggacaacgtggaggtctgtgagggtgagctcatcaacctgcagggcaagatcctcagcgtggatggcaacaagatcaccatcatgcccaagcatgaggacctcaaggacatgttggagttcccagcccaggaacttagaaaatacttcaagatgggggaccacgtgaaggtgattgctggccgattcgagggcgacacaggcctcattgtgcgggtggaggagaatttcgttatcctgttctctgacctcaccatgcatgagctgaaggtgctcccccgggacctgcagctctgctcagagacagcatcaggtgtggatgttgggggccagcatgaatggggcgagctggtgcagctggatccccagactgtgggtgtcatcgtgcgactagaacgggagaccttccaggtgctgaacatgtacgggaaggtggtgactgtcagacatcaggctgtgacccggaagaaggacaaccgctttgctgtggccttggactcagagcagaacaacatccatgtgaaagacatcgttaaggtcattgatggcccccactcaggccgagaaggggagattcgccatctcttccgaagcttcgccttcctacattgcaagaaactggtggagaacgggggcatgtttgtctgcaagacccgccacctggtgctggctgggggctcaaagccccgtgatgtgaccaacttcaccgtgggtggctttgcgcctatgagtccccggatcagcagccccatgcaccccagtgctggaggtcagcgtggcggctttggtagcccaggtggcggcagtggtggcatgagcaggggccggggccggagggacaacgaactcatcggccagaccgtgcgcatctcccaggggccctacaaaggctacatcggtgtggtgaaagatgccacagagtccacggcccgtgtggagctgcactccacctgccagaccatctctgtggaccgtcagcggctcaccacggtgggctcacggcgcccgggcggcatgacctcgacctatgggaggacgcccatgtatggctcccagacgcccatgtatggctctggctcccgaacacccatgtacggctcacagacacccctccaggatggtagccgcaccccacactacggctcacagacgcccctgcatgatggcagccgcactcctgcccagagtggggcctgggaccccaacaaccccaacacgccgtcacgggctgaggaagaatatgagtatgctttcgatgatgagcccaccccgtccccgcaggcctatgggggaacccccaatccccaaacacctggctacccagacccctcgtccccacaggtcaacccacaatacaacccgcagacgccagggacgccggccatgtacaacacagaccagttctctccctatgctgccccctccccacaaggttcctaccagcccagccccagcccccagagctaccaccaggtggcgccaagcccagcaggctaccagaatacccactccccagccagctaccaccctacaccgtcgcccatggcctatcaggctagccccagcccgagccccgttggctacagtcctatgacacctggagctccctcccctggtggctacaacccacacacgccaggctcaggcatcgagcagaactccagcgactgggtaaccactgacattcaggtgaaggtgcgggacacctacctggatacacaggtggtgggacagacaggtgtcatccgcagtgtcacggggggcatgtgctctgtgtacctgaaggacagtgagaaggttgtcagcatttccagtgagcacctggagcctatcacccccaccaagaacaacaaggtgaaagtgatcctgggcgaggatcgggaagccacgggcgtcctactgagcattgatggtgaggatggcattgtccgtatggaccttgatgagcagctcaagatcctcaacctccgcttcctggggaagctcctggaagcctgaagcaggcagggccggtggacttcgtcggatgaagagtgatcctccttccttccctggcccttggctgtgacacaagatcctcctgcagggctaggcggattgttctggatttccttttgtttttccttttagttttccatcttttccctccctggtgctcattggaatctgagtagagtctgggggagggtccccaccttcctgtacctcctccccacagcttgcttttgttgtaccgtctttcaataaaaagaagctgtttggtctaaaaaaaaaaaaaaaaaaaaaaaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:6829 -> Molecular function: GO:0003682 [chromatin binding] evidence: IEA
GeneID:6829 -> Molecular function: GO:0005515 [protein binding] evidence: IPI
GeneID:6829 -> Molecular function: GO:0019899 [enzyme binding] evidence: IPI
GeneID:6829 -> Molecular function: GO:0046982 [protein heterodimerization activity] evidence: IPI
GeneID:6829 -> Biological process: GO:0000122 [negative regulation of transcription from RNA polymerase II promoter] evidence: IDA
GeneID:6829 -> Biological process: GO:0006338 [chromatin remodeling] evidence: NAS
GeneID:6829 -> Biological process: GO:0006354 [DNA-dependent transcription, elongation] evidence: IDA
GeneID:6829 -> Biological process: GO:0006366 [transcription from RNA polymerase II promoter] evidence: TAS
GeneID:6829 -> Biological process: GO:0006368 [transcription elongation from RNA polymerase II promoter] evidence: IDA
GeneID:6829 -> Biological process: GO:0006368 [transcription elongation from RNA polymerase II promoter] evidence: TAS
GeneID:6829 -> Biological process: GO:0006370 [7-methylguanosine mRNA capping] evidence: TAS
GeneID:6829 -> Biological process: GO:0007049 [cell cycle] evidence: NAS
GeneID:6829 -> Biological process: GO:0010033 [response to organic substance] evidence: TAS
GeneID:6829 -> Biological process: GO:0010467 [gene expression] evidence: TAS
GeneID:6829 -> Biological process: GO:0016032 [viral process] evidence: TAS
GeneID:6829 -> Biological process: GO:0016239 [positive regulation of macroautophagy] evidence: IMP
GeneID:6829 -> Biological process: GO:0032785 [negative regulation of DNA-dependent transcription, elongation] evidence: IDA
GeneID:6829 -> Biological process: GO:0032786 [positive regulation of DNA-dependent transcription, elongation] evidence: IDA
GeneID:6829 -> Biological process: GO:0032968 [positive regulation of transcription elongation from RNA polymerase II promoter] evidence: IEA
GeneID:6829 -> Biological process: GO:0045090 [retroviral genome replication] evidence: NAS
GeneID:6829 -> Biological process: GO:0045944 [positive regulation of transcription from RNA polymerase II promoter] evidence: IDA
GeneID:6829 -> Biological process: GO:0050434 [positive regulation of viral transcription] evidence: TAS
GeneID:6829 -> Cellular component: GO:0005634 [nucleus] evidence: IDA
GeneID:6829 -> Cellular component: GO:0005654 [nucleoplasm] evidence: TAS
GeneID:6829 -> Cellular component: GO:0005730 [nucleolus] evidence: IDA
GeneID:6829 -> Cellular component: GO:0032044 [DSIF complex] evidence: IDA
by
@meso_cacase at
DBCLS
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