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2024-03-30 00:31:51, GGRNA : RefSeq release 60 (20130726)

LOCUS       NM_001011516            1971 bp    mRNA    linear   PRI 07-JUL-2013
DEFINITION  Homo sapiens PDZ and LIM domain 5 (PDLIM5), transcript variant 5,
            mRNA.
ACCESSION   NM_001011516
VERSION     NM_001011516.2  GI:374093206
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1971)
  AUTHORS   Hui,J., Wang,J.Y., Shi,X.H., Zhang,Y.G., Liu,M., Wang,X.,
            Wang,N.N., Chen,X., Liang,S.Y., Wei,D., Zhao,F., Zhang,Y.H. and
            Yang,Z.
  TITLE     [Association of prostate cancer with PDLIM5, SLC22A3 and NKX3-1 in
            Chinese men]
  JOURNAL   Zhonghua Nan Ke Xue 18 (5), 404-411 (2012)
   PUBMED   22741436
  REMARK    GeneRIF: PDLIM5 (rs17021918,T), SLC22A3 (rs9364554,C) and NKX3-1
            (rs1512268,A) SNPs might not be associated with prostate cancer in
            Chinese men.
REFERENCE   2  (bases 1 to 1971)
  AUTHORS   Zain,M.A., Jahan,S.N., Reynolds,G.P., Zainal,N.Z., Kanagasundram,S.
            and Mohamed,Z.
  TITLE     Peripheral PDLIM5 expression in bipolar disorder and the effect of
            olanzapine administration
  JOURNAL   BMC Med. Genet. 13, 91 (2012)
   PUBMED   23031404
  REMARK    GeneRIF: The significant difference in expression of PDLIM5 mRNA in
            the peripheral blood leukocytes of treatment-naive bipolar (BPD)
            patients versus that of healthy control subjects suggests that it
            may be a good biological marker for BPD.
            Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1971)
  AUTHORS   Fox CS, Liu Y, White CC, Feitosa M, Smith AV, Heard-Costa N, Lohman
            K, Johnson AD, Foster MC, Greenawalt DM, Griffin P, Ding J, Newman
            AB, Tylavsky F, Miljkovic I, Kritchevsky SB, Launer L, Garcia M,
            Eiriksdottir G, Carr JJ, Gudnason V, Harris TB, Cupples LA and
            Borecki IB.
  CONSRTM   GIANT Consortium; MAGIC Consortium; GLGC Consortium
  TITLE     Genome-wide association for abdominal subcutaneous and visceral
            adipose reveals a novel locus for visceral fat in women
  JOURNAL   PLoS Genet. 8 (5), E1002695 (2012)
   PUBMED   22589738
REFERENCE   4  (bases 1 to 1971)
  AUTHORS   Lasorella,A. and Iavarone,A.
  TITLE     The protein ENH is a cytoplasmic sequestration factor for Id2 in
            normal and tumor cells from the nervous system
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 103 (13), 4976-4981 (2006)
   PUBMED   16549780
  REMARK    GeneRIF: ENH is a restraining factor of the oncogenic activity of
            inhibitor of DNA binding 2 proteins in neural tumors
REFERENCE   5  (bases 1 to 1971)
  AUTHORS   Niederlander,N., Fayein,N.A., Auffray,C. and Pomies,P.
  TITLE     Characterization of a new human isoform of the enigma homolog
            family specifically expressed in skeletal muscle
  JOURNAL   Biochem. Biophys. Res. Commun. 325 (4), 1304-1311 (2004)
   PUBMED   15555569
  REMARK    GeneRIF: Western blot studies of muscle tissues revealed that ENH4
            is present only in skeletal muscle and there is a specific
            distribution of ENH members between skeletal and cardiac muscles,
            which is different in human and mouse.
REFERENCE   6  (bases 1 to 1971)
  AUTHORS   Wu,M., Li,Y., Ji,C., Xu,J., Zheng,H., Zou,X., Gu,S., Lou,Y., Xie,Y.
            and Mao,Y.
  TITLE     Cloning and identification of a novel human gene PDLIM5, a homolog
            of AD-associated neuronal thread protein (AD7c-NTP)
  JOURNAL   DNA Seq. 15 (2), 144-147 (2004)
   PUBMED   15346770
REFERENCE   7  (bases 1 to 1971)
  AUTHORS   Maeno-Hikichi,Y., Chang,S., Matsumura,K., Lai,M., Lin,H.,
            Nakagawa,N., Kuroda,S. and Zhang,J.F.
  TITLE     A PKC epsilon-ENH-channel complex specifically modulates N-type
            Ca2+ channels
  JOURNAL   Nat. Neurosci. 6 (5), 468-475 (2003)
   PUBMED   12665800
REFERENCE   8  (bases 1 to 1971)
  AUTHORS   Nakagawa,N., Hoshijima,M., Oyasu,M., Saito,N., Tanizawa,K. and
            Kuroda,S.
  TITLE     ENH, containing PDZ and LIM domains, heart/skeletal muscle-specific
            protein, associates with cytoskeletal proteins through the PDZ
            domain
  JOURNAL   Biochem. Biophys. Res. Commun. 272 (2), 505-512 (2000)
   PUBMED   10833443
REFERENCE   9  (bases 1 to 1971)
  AUTHORS   Ueki,N., Seki,N., Yano,K., Masuho,Y., Saito,T. and Muramatsu,M.
  TITLE     Isolation, tissue expression, and chromosomal assignment of a human
            LIM protein gene, showing homology to rat enigma homologue (ENH)
  JOURNAL   J. Hum. Genet. 44 (4), 256-260 (1999)
   PUBMED   10429367
REFERENCE   10 (bases 1 to 1971)
  AUTHORS   Kuroda,S., Tokunaga,C., Kiyohara,Y., Higuchi,O., Konishi,H.,
            Mizuno,K., Gill,G.N. and Kikkawa,U.
  TITLE     Protein-protein interaction of zinc finger LIM domains with protein
            kinase C
  JOURNAL   J. Biol. Chem. 271 (49), 31029-31032 (1996)
   PUBMED   8940095
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence was derived from DA895978.1, BC017902.1,
            AK291898.1, AC093778.3 and AA253314.1.
            On Jan 27, 2012 this sequence version replaced gi:58533160.
            
            Summary: This gene encodes a member of a family of proteins that
            possess a 100-amino acid PDZ domain at the N terminus and one to
            three LIM domains at the C-terminus. This family member functions
            as a scaffold protein that tethers protein kinases to the Z-disk in
            striated muscles. It is thought to function in cardiomyocyte
            expansion and in restraining postsynaptic growth of excitatory
            synapses. Alternative splicing of this gene results in multiple
            transcript variants. [provided by RefSeq, Jan 2012].
            
            Transcript Variant: This variant (5) has multiple differences in
            the coding region, lacks several 3' exons but contains an alternate
            3' exon, and it thus has an alternate 3' coding region and 3' UTR,
            compared to isoform a. The encoded isoform (e, also known as ENH4)
            has a distinct C-terminus and is shorter than isoform a.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC017902.1, AK291898.1 [ECO:0000332]
            RNAseq introns              :: mixed/partial sample support
                                           ERS025083, ERS025084 [ECO:0000350]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-57                DA895978.1         1-57
            58-648              BC017902.1         1-591
            649-884             AK291898.1         574-809
            885-1712            AC093778.3         105922-106749
            1713-1971           AA253314.1         1-259               c
FEATURES             Location/Qualifiers
     source          1..1971
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="4"
                     /map="4q22"
     gene            1..1971
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /note="PDZ and LIM domain 5"
                     /db_xref="GeneID:10611"
                     /db_xref="HGNC:17468"
                     /db_xref="MIM:605904"
     exon            1..139
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /inference="alignment:Splign:1.39.8"
     variation       24
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:138430072"
     variation       49
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:192733830"
     variation       63
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:184767586"
     variation       70
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:143611898"
     variation       79
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:28736374"
     variation       81
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:147199893"
     variation       113
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:369769495"
     exon            140..277
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /inference="alignment:Splign:1.39.8"
     variation       165
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:200141226"
     misc_feature    167..169
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /note="upstream in-frame stop codon"
     CDS             182..826
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /note="isoform e is encoded by transcript variant 5;
                     enigma homolog; PDZ and LIM domain protein 5; enigma-like
                     LIM domain protein; enigma-like PDZ and LIM domains
                     protein"
                     /codon_start=1
                     /product="PDZ and LIM domain protein 5 isoform e"
                     /protein_id="NP_001011516.1"
                     /db_xref="GI:58533161"
                     /db_xref="CCDS:CCDS47104.1"
                     /db_xref="GeneID:10611"
                     /db_xref="HGNC:17468"
                     /db_xref="MIM:605904"
                     /translation="
MSNYSVSLVGPAPWGFRLQGGKDFNMPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKGCTGSLNMTLQRASAAPKPEPVPVQKKTQVTNNPGTVKIPPKRPPRKHIVERYTEFYHVPTHSDASKKRLIEDTEDWRPRTGTTQSRSFRILAQITGTEHLKESEADNTKKAKEKIPLHVFSPKYTKLRDWHHEVSARALNVQ
"
     misc_feature    185..187
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="N-acetylserine; propagated from
                     UniProtKB/Swiss-Prot (Q96HC4.5); acetylation site"
     misc_feature    209..427
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /note="PDZ domain found in a variety of Eumetazoan
                     signaling molecules, often in tandem arrangements. May be
                     responsible for specific protein-protein interactions, as
                     most PDZ domains bind C-terminal polypeptides, and binding
                     to internal (non-C-terminal)...; Region: PDZ_signaling;
                     cd00992"
                     /db_xref="CDD:29049"
     misc_feature    order(218..229,233..235,377..382,389..394)
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /note="protein binding site [polypeptide binding]; other
                     site"
                     /db_xref="CDD:29049"
     misc_feature    563..565
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="phosphorylation site"
     variation       217
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:373896689"
     variation       241
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:145981438"
     variation       246
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:75841704"
     exon            278..429
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /inference="alignment:Splign:1.39.8"
     variation       288
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:376270307"
     variation       328
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:114621202"
     variation       355
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:368230269"
     variation       359
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:146671681"
     variation       366
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:151288647"
     variation       426
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:372541276"
     exon            430..472
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /inference="alignment:Splign:1.39.8"
     variation       431
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:371717002"
     variation       455
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:375778697"
     variation       456
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:200495769"
     variation       457
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:145853286"
     exon            473..489
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /inference="alignment:Splign:1.39.8"
     exon            490..504
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /inference="alignment:Splign:1.39.8"
     variation       495
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:372956957"
     exon            505..522
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /inference="alignment:Splign:1.39.8"
     variation       521
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:370669920"
     exon            523..695
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /inference="alignment:Splign:1.39.8"
     variation       528
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:375364739"
     variation       548
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:201891054"
     variation       549
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:141403934"
     variation       578
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:150388657"
     variation       611
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:202231060"
     variation       627
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:113605096"
     variation       631
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:115214197"
     variation       634
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:11722955"
     variation       649
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:11097431"
     variation       679
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:371463583"
     exon            696..732
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /inference="alignment:Splign:1.39.8"
     variation       712
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:202092014"
     variation       723
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:115781887"
     exon            733..1963
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /inference="alignment:Splign:1.39.8"
     variation       744
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:368434732"
     variation       751
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:372509415"
     variation       752
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:375154089"
     variation       772
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:199798888"
     variation       780
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:369465325"
     variation       797
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:79765561"
     variation       817
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:181685632"
     STS             821..1000
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /standard_name="RH91416"
                     /db_xref="UniSTS:88822"
     variation       830
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:373227250"
     variation       873
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:199977664"
     variation       875
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:201186480"
     variation       875
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace=""
                     /replace="t"
                     /db_xref="dbSNP:5860367"
     variation       908
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:184470510"
     variation       918
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:189671146"
     variation       930
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:181104813"
     variation       1026
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:62316474"
     variation       1027..1029
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace=""
                     /replace="a"
                     /db_xref="dbSNP:5860368"
     variation       1027
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:202245025"
     variation       1028
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace=""
                     /replace="a"
                     /db_xref="dbSNP:66505111"
     variation       1028
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="c"
                     /db_xref="dbSNP:78280282"
     variation       1071
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:2131456"
     variation       1094
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:2131457"
     variation       1119
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:145963690"
     variation       1143
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:138571118"
     variation       1207..1210
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace=""
                     /replace="tact"
                     /db_xref="dbSNP:145075802"
     variation       1208..1211
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace=""
                     /replace="actt"
                     /db_xref="dbSNP:367682604"
     variation       1211
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace=""
                     /replace="actt"
                     /db_xref="dbSNP:75036921"
     variation       1234
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:185996529"
     variation       1320
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:191195682"
     variation       1348
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:12642449"
     variation       1382
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:11551408"
     variation       1402
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:369119823"
     STS             1414..1508
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /standard_name="SHGC-63474"
                     /db_xref="UniSTS:15587"
     variation       1458
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:79700101"
     variation       1579
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:2637973"
     variation       1591
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:141657395"
     STS             1717..1848
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /standard_name="SHGC-63475"
                     /db_xref="UniSTS:5487"
     STS             1719..1844
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /standard_name="RH91857"
                     /db_xref="UniSTS:88158"
     polyA_signal    1851..1856
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
     polyA_site      1871
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
     variation       1925
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:377202992"
     polyA_signal    1945..1950
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
     variation       1958
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
                     /replace="c"
                     /replace="g"
                     /db_xref="dbSNP:144318128"
     polyA_site      1963
                     /gene="PDLIM5"
                     /gene_synonym="ENH; ENH1; L9; LIM"
ORIGIN      
gtgtcctgggtcgggggtggggcgagggagagccaggaggcggaagttcccgcgggcggtggggacggcgccctcaccgcgagtcacttgtcagcccttgtctgaggcggaggcagccccgcgccgcgccggacccgagcatatttcattttctgtcattggactttgagccattagaaccatgagcaactacagtgtgtcactggttggcccagctccttggggtttccggctgcagggcggtaaggatttcaacatgcctctgacaatctctagtctaaaagatggcggcaaggcagcccaggcaaatgtaagaataggcgatgtggttctcagcattgatggaataaatgcacaaggaatgactcatcttgaagcccagaataagattaagggttgtacaggctctttgaatatgactctgcaaagagcatctgctgcacccaagcctgagccggttcctgttcaaaagaaaacacaagtgacaaataaccctggcactgtgaaaatcccacctaaacgcccaccaagaaaacacattgtggagcgctatacagagttttatcatgtacccactcacagtgatgccagcaagaagagactgattgaggatactgaagactggcgtccaaggactggaacaactcagtctcgctctttccgaatccttgcccagatcactgggactgaacatttgaaagaatctgaagccgataatacaaagaaggcaaaggaaaagataccccttcacgtctttagtcccaaatacacaaaattacgtgactggcaccatgaagtttcagcacgtgctcttaacgtacagtgatttatgagccttgccccccaagcagccagcacataccttttcatttactttttttttttcaacttcatagcaaaatctgtattaaatttgccttatgaaaaaatagaactttttctatacttttctaacaatttcctattgttgtgagaaaaggaagatgaacatgttttgtgctagttggtagctcacaaatgtaaaaccaaaaaaaaaaaaaaatagaaaattaagggactagatctatttgtggatttgtatctgtttttgttgtgattagggtagtaatcttggaaaacgaattattttcataagttgaatttggttagttggttggttgaagcagaggataatgagcaaataaagtccttgtctaatttggaaaatactttctttatattattaacatctcccaagattactttttaagttcattattatgttacattcaaagttgattgtaaattattctaaataagtaaatataaggaggcaagaataaacaaagactttattaaagaagagtgcgtgcattgtagatttaggtatcttttaaagtaggtactattcaggatggctctatgaagaggaggaggtccagatttggctcctgaaaaaggaaagaagagaattttacccctatttgcaatggagaaatacagtattctttggtttggttggatttgcaaatcctatttcctatcaaaggaaatatctctagtggatatttttagaatatagacaatttctaggtattaactaataagatatggaaaagatagctttgctttttttaatcagaagaacataaaataaattacaatatgaatgattgtgagacatcagagaaatattttacttagtgacgtaaactactgtgcactgctgctattcctaggaagctgtgttttgggcaatacatggaagctaaatatatgaccagaaatgctttctgccttgtaatatagtgtattatatattagagctaaatttagtaataaatgcattttgaagtttggaaaagtattgtaataaagttgcctttaacttagctttgtacttgttctgtttccttgaggctagacacagtgccatccaggacttattacagtataactgggtaaaataaacaattctctgacaaaaaaaaa
//

Annotations:

ANNOTATIONS from NCBI Entrez Gene (20130726):
            GeneID:10611 -> Molecular function: GO:0003779 [actin binding] evidence: ISS
            GeneID:10611 -> Molecular function: GO:0005080 [protein kinase C binding] evidence: ISS
            GeneID:10611 -> Molecular function: GO:0008270 [zinc ion binding] evidence: IEA
            GeneID:10611 -> Molecular function: GO:0042805 [actinin binding] evidence: ISS
            GeneID:10611 -> Biological process: GO:0051963 [regulation of synapse assembly] evidence: ISS
            GeneID:10611 -> Biological process: GO:0061001 [regulation of dendritic spine morphogenesis] evidence: ISS
            GeneID:10611 -> Cellular component: GO:0005829 [cytosol] evidence: ISS
            GeneID:10611 -> Cellular component: GO:0005886 [plasma membrane] evidence: IEA
            GeneID:10611 -> Cellular component: GO:0014069 [postsynaptic density] evidence: ISS
            GeneID:10611 -> Cellular component: GO:0015629 [actin cytoskeleton] evidence: IDA
            GeneID:10611 -> Cellular component: GO:0016020 [membrane] evidence: ISS
            GeneID:10611 -> Cellular component: GO:0030054 [cell junction] evidence: IEA
            GeneID:10611 -> Cellular component: GO:0043005 [neuron projection] evidence: IEA
            GeneID:10611 -> Cellular component: GO:0045211 [postsynaptic membrane] evidence: IEA

by @meso_cacase at DBCLS
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