GGRNA Home | Help | Advanced search

2024-04-27 01:31:23, GGRNA : RefSeq release 60 (20130726)

LOCUS       NM_001008540            1912 bp    mRNA    linear   PRI 15-JUL-2013
DEFINITION  Homo sapiens chemokine (C-X-C motif) receptor 4 (CXCR4), transcript
            variant 1, mRNA.
ACCESSION   NM_001008540
VERSION     NM_001008540.1  GI:56790926
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1912)
  AUTHORS   Arnolds,K.L., Lares,A.P. and Spencer,J.V.
  TITLE     The US27 gene product of human cytomegalovirus enhances signaling
            of host chemokine receptor CXCR4
  JOURNAL   Virology 439 (2), 122-131 (2013)
   PUBMED   23490053
  REMARK    GeneRIF: Potentiation of CXCR4 signaling by US27 could represent a
            novel strategy by which human cytomegalovirus targets
            virus-infected cells to the bone marrow in order to expand the
            reservoir of latently infected cells.
REFERENCE   2  (bases 1 to 1912)
  AUTHORS   Mo,W., Chen,J., Patel,A., Zhang,L., Chau,V., Li,Y., Cho,W., Lim,K.,
            Xu,J., Lazar,A.J., Creighton,C.J., Bolshakov,S., McKay,R.M.,
            Lev,D., Le,L.Q. and Parada,L.F.
  TITLE     CXCR4/CXCL12 mediate autocrine cell- cycle progression in
            NF1-associated malignant peripheral nerve sheath tumors
  JOURNAL   Cell 152 (5), 1077-1090 (2013)
   PUBMED   23434321
  REMARK    GeneRIF: Study provides evidence that the CXCR4/CXCL12 axis is
            essential for Malignant peripheral nerve sheath tumors (MPNST)
            tumor progression. Specifically, the autocrine activation of CXCR4
            by CXCL12 triggers intracellular PI3-kinase and beta-catenin
            signals to promote G1 to S phase transition in MPNST cells.
REFERENCE   3  (bases 1 to 1912)
  AUTHORS   Yuan,L., Zhang,H., Liu,J., Rubin,J.B., Cho,Y.J., Shu,H.K.,
            Schniederjan,M. and MacDonald,T.J.
  TITLE     Growth factor receptor-Src-mediated suppression of GRK6
            dysregulates CXCR4 signaling and promotes medulloblastoma migration
  JOURNAL   Mol. Cancer 12, 18 (2013)
   PUBMED   23497290
  REMARK    GeneRIF: Growth factor receptor/PDGFR-Src-mediated dysregulation of
            CXCR4 signaling promotes medulloblastoma cell migration.
            Publication Status: Online-Only
REFERENCE   4  (bases 1 to 1912)
  AUTHORS   Ng,K.Y., Chew,K.K., Kaur,P., Kwan,J.Y., Khong,W.X., Lin,L.,
            Chua,A., Tan,M.T., Quinn,T.C., Laeyendecker,O., Leo,Y.S. and
            Ng,O.T.
  TITLE     High prevalence of CXCR4 usage among treatment-naive CRF01_AE and
            CRF51_01B-infected HIV-1 subjects in Singapore
  JOURNAL   BMC Infect. Dis. 13, 90 (2013)
   PUBMED   23421710
  REMARK    GeneRIF: CRF51_01B and CRF01_AE-infected individuals have higher
            prevalence of CXCR4-usage compared to subtype B infected
            individuals.
            Publication Status: Online-Only
REFERENCE   5  (bases 1 to 1912)
  AUTHORS   de Muga,S., Hernandez,S., Salido,M., Lorenzo,M., Agell,L.,
            Juanpere,N., Lorente,J.A., Serrano,S. and Lloreta,J.
  TITLE     CXCR4 mRNA overexpression in high grade prostate tumors: lack of
            association with TMPRSS2-ERG rearrangement
  JOURNAL   Cancer Biomark 12 (1), 21-30 (2012)
   PUBMED   23321466
  REMARK    GeneRIF: CXCR4 overexpression is associated with high Gleason score
            prostate tumors, but that it is independent of the TMPRSS2-ERG
            rearrangement.
REFERENCE   6  (bases 1 to 1912)
  AUTHORS   Lu,Z.H., Wang,Z.X., Horuk,R., Hesselgesser,J., Lou,Y.C.,
            Hadley,T.J. and Peiper,S.C.
  TITLE     The promiscuous chemokine binding profile of the Duffy
            antigen/receptor for chemokines is primarily localized to sequences
            in the amino-terminal domain
  JOURNAL   J. Biol. Chem. 270 (44), 26239-26245 (1995)
   PUBMED   7592830
REFERENCE   7  (bases 1 to 1912)
  AUTHORS   Loetscher,M., Geiser,T., O'Reilly,T., Zwahlen,R., Baggiolini,M. and
            Moser,B.
  TITLE     Cloning of a human seven-transmembrane domain receptor, LESTR, that
            is highly expressed in leukocytes
  JOURNAL   J. Biol. Chem. 269 (1), 232-237 (1994)
   PUBMED   8276799
REFERENCE   8  (bases 1 to 1912)
  AUTHORS   Nomura,H., Nielsen,B.W. and Matsushima,K.
  TITLE     Molecular cloning of cDNAs encoding a LD78 receptor and putative
            leukocyte chemotactic peptide receptors
  JOURNAL   Int. Immunol. 5 (10), 1239-1249 (1993)
   PUBMED   7505609
REFERENCE   9  (bases 1 to 1912)
  AUTHORS   Jazin,E.E., Yoo,H., Blomqvist,A.G., Yee,F., Weng,G., Walker,M.W.,
            Salon,J., Larhammar,D. and Wahlestedt,C.
  TITLE     A proposed bovine neuropeptide Y (NPY) receptor cDNA clone, or its
            human homologue, confers neither NPY binding sites nor NPY
            responsiveness on transfected cells
  JOURNAL   Regul. Pept. 47 (3), 247-258 (1993)
   PUBMED   8234909
REFERENCE   10 (bases 1 to 1912)
  AUTHORS   Itoh,H., Toyama,R., Kozasa,T., Tsukamoto,T., Matsuoka,M. and
            Kaziro,Y.
  TITLE     Presence of three distinct molecular species of Gi protein alpha
            subunit. Structure of rat cDNAs and human genomic DNAs
  JOURNAL   J. Biol. Chem. 263 (14), 6656-6664 (1988)
   PUBMED   2834384
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence was derived from AF147204.1.
            
            Summary: This gene encodes a CXC chemokine receptor specific for
            stromal cell-derived factor-1. The protein has 7 transmembrane
            regions and is located on the cell surface. It acts with the CD4
            protein to support HIV entry into cells and is also highly
            expressed in breast cancer cells. Mutations in this gene have been
            associated with WHIM (warts, hypogammaglobulinemia, infections, and
            myelokathexis) syndrome. Alternate transcriptional splice variants,
            encoding different isoforms, have been characterized. [provided by
            RefSeq, Jul 2008].
            
            Transcript Variant: This variant (1), also known as CXCR4-Lo,
            represents the longer transcript and encodes the longer isoform
            (a).
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript is intronless :: AF147204.1 [ECO:0000345]
            ##Evidence-Data-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1912              AF147204.1         39-1950
FEATURES             Location/Qualifiers
     source          1..1912
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="2"
                     /map="2q21"
     gene            1..1912
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /note="chemokine (C-X-C motif) receptor 4"
                     /db_xref="GeneID:7852"
                     /db_xref="HGNC:2561"
                     /db_xref="HPRD:01217"
                     /db_xref="MIM:162643"
     exon            1..1895
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /inference="alignment:Splign:1.39.8"
     misc_feature    302..304
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /note="upstream in-frame stop codon"
     CDS             305..1375
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /note="isoform a is encoded by transcript variant 1;
                     leukocyte-derived seven-transmembrane-domain receptor;
                     seven-transmembrane-segment receptor, spleen;
                     lipopolysaccharide-associated protein 3; stromal
                     cell-derived factor 1 receptor; CD184 antigen; C-X-C
                     chemokine receptor type 4; neuropeptide Y receptor Y3;
                     fusin; seven transmembrane helix receptor; CXC-R4; CXCR-4;
                     SDF-1 receptor; leukocyte-derived seven transmembrane
                     domain receptor"
                     /codon_start=1
                     /product="C-X-C chemokine receptor type 4 isoform a"
                     /protein_id="NP_001008540.1"
                     /db_xref="GI:56790927"
                     /db_xref="CCDS:CCDS33295.1"
                     /db_xref="GeneID:7852"
                     /db_xref="HGNC:2561"
                     /db_xref="HPRD:01217"
                     /db_xref="MIM:162643"
                     /translation="
MSIPLPLLQIYTSDNYTEEMGSGDYDSMKEPCFREENANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFVITLPFWAVDAVANWYFGNFLCKAVHVIYTVNLYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALTSVSRGSSLKILSKGKRGGHSSVSTESESSSFHSS
"
     misc_feature    332..430
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /note="CXCR4 Chemokine receptor N terminal; Region:
                     CXCR4_N; pfam12109"
                     /db_xref="CDD:152544"
     misc_feature    347..349
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="glycosylation site"
     misc_feature    368..370
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="sulfatation site"
     misc_feature    377..379
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="sulfatation site"
     misc_feature    497..1222
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /note="7 transmembrane receptor (rhodopsin family);
                     Region: 7tm_1; pfam00001"
                     /db_xref="CDD:200918"
     misc_feature    1268..1270
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="phosphorylation site"
     misc_feature    1277..1279
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="phosphorylation site"
     misc_feature    1286..1288
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="phosphorylation site"
     misc_feature    1289..1291
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="phosphorylation site"
     misc_feature    1352..1354
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="phosphorylation site"
     misc_feature    1358..1360
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="phosphorylation site"
     misc_feature    1370..1372
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /experiment="experimental evidence, no additional details
                     recorded"
                     /note="phosphorylation site"
     STS             379..759
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /standard_name="PMC109444P3"
                     /db_xref="UniSTS:270168"
     STS             459..1046
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /standard_name="Cxcr4"
                     /db_xref="UniSTS:528302"
     STS             631..932
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /standard_name="PMC109434P1"
                     /db_xref="UniSTS:270163"
     STS             658..1507
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /standard_name="CXCR4_564"
                     /db_xref="UniSTS:277147"
     variation       661
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:1051557"
     variation       730
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /replace="c"
                     /replace="t"
                     /db_xref="dbSNP:2228014"
     STS             760..1093
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /standard_name="PMC109895P1"
                     /db_xref="UniSTS:270179"
     STS             857..1375
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /standard_name="PMC149544P1"
                     /db_xref="UniSTS:271047"
     STS             877..1066
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /standard_name="CXCR4"
                     /db_xref="UniSTS:480008"
     STS             1201..1826
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /standard_name="PMC112647P1"
                     /db_xref="UniSTS:270237"
     variation       1404
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:17848059"
     variation       1441
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /replace="g"
                     /replace="t"
                     /db_xref="dbSNP:1804029"
     STS             1460..1666
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /standard_name="SHGC-31461"
                     /db_xref="UniSTS:80512"
     STS             1599..1847
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /standard_name="PMC110622P1"
                     /db_xref="UniSTS:270191"
     STS             1664..1853
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /standard_name="RH17365"
                     /db_xref="UniSTS:9776"
     STS             1719..1847
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /standard_name="RH78321"
                     /db_xref="UniSTS:35222"
     variation       1792
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /replace="a"
                     /replace="g"
                     /db_xref="dbSNP:148300422"
     variation       1805
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
                     /replace="a"
                     /replace="t"
                     /db_xref="dbSNP:17848060"
     polyA_signal    1873..1878
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
     polyA_site      1895
                     /gene="CXCR4"
                     /gene_synonym="CD184; D2S201E; FB22; HM89; HSY3RR; LAP3;
                     LCR1; LESTR; NPY3R; NPYR; NPYRL; NPYY3R; WHIM"
ORIGIN      
ttttttttcttccctctagtgggcggggcagaggagttagccaagatgtgactttgaaaccctcagcgtctcagtgcccttttgttctaaacaaagaattttgtaattggttctaccaaagaaggatataatgaagtcactatgggaaaagatggggaggagagttgtaggattctacattaattctcttgtgcccttagcccactacttcagaatttcctgaagaaagcaagcctgaattggttttttaaattgctttaaaaattttttttaactgggttaatgcttgctgaattggaagtgaatgtccattcctttgcctcttttgcagatatacacttcagataactacaccgaggaaatgggctcaggggactatgactccatgaaggaaccctgtttccgtgaagaaaatgctaatttcaataaaatcttcctgcccaccatctactccatcatcttcttaactggcattgtgggcaatggattggtcatcctggtcatgggttaccagaagaaactgagaagcatgacggacaagtacaggctgcacctgtcagtggccgacctcctctttgtcatcacgcttcccttctgggcagttgatgccgtggcaaactggtactttgggaacttcctatgcaaggcagtccatgtcatctacacagtcaacctctacagcagtgtcctcatcctggccttcatcagtctggaccgctacctggccatcgtccacgccaccaacagtcagaggccaaggaagctgttggctgaaaaggtggtctatgttggcgtctggatccctgccctcctgctgactattcccgacttcatctttgccaacgtcagtgaggcagatgacagatatatctgtgaccgcttctaccccaatgacttgtgggtggttgtgttccagtttcagcacatcatggttggccttatcctgcctggtattgtcatcctgtcctgctattgcattatcatctccaagctgtcacactccaagggccaccagaagcgcaaggccctcaagaccacagtcatcctcatcctggctttcttcgcctgttggctgccttactacattgggatcagcatcgactccttcatcctcctggaaatcatcaagcaagggtgtgagtttgagaacactgtgcacaagtggatttccatcaccgaggccctagctttcttccactgttgtctgaaccccatcctctatgctttccttggagccaaatttaaaacctctgcccagcacgcactcacctctgtgagcagagggtccagcctcaagatcctctccaaaggaaagcgaggtggacattcatctgtttccactgagtctgagtcttcaagttttcactccagctaacacagatgtaaaagacttttttttatacgataaataacttttttttaagttacacatttttcagatataaaagactgaccaatattgtacagtttttattgcttgttggatttttgtcttgtgtttctttagtttttgtgaagtttaattgacttatttatataaattttttttgtttcatattgatgtgtgtctaggcaggacctgtggccaagttcttagttgctgtatgtctcgtggtaggactgtagaaaagggaactgaacattccagagcgtgtagtgaatcacgtaaagctagaaatgatccccagctgtttatgcatagataatctctccattcccgtggaacgtttttcctgttcttaagacgtgattttgctgtagaagatggcacttataaccaaagcccaaagtggtatagaaatgctggtttttcagttttcaggagtgggttgatttcagcacctacagtgtacagtcttgtattaagttgttaataaaagtacatgttaaacttaaaaaaaaaaaaaaaaaa
//

Annotations:

ANNOTATIONS from NCBI Entrez Gene (20130726):
            GeneID:7852 -> Molecular function: GO:0003779 [actin binding] evidence: IDA
            GeneID:7852 -> Molecular function: GO:0004930 [G-protein coupled receptor activity] evidence: TAS
            GeneID:7852 -> Molecular function: GO:0005515 [protein binding] evidence: IPI
            GeneID:7852 -> Molecular function: GO:0015026 [coreceptor activity] evidence: TAS
            GeneID:7852 -> Molecular function: GO:0016494 [C-X-C chemokine receptor activity] evidence: NAS
            GeneID:7852 -> Molecular function: GO:0019955 [cytokine binding] evidence: IEA
            GeneID:7852 -> Molecular function: GO:0031625 [ubiquitin protein ligase binding] evidence: IPI
            GeneID:7852 -> Molecular function: GO:0032027 [myosin light chain binding] evidence: IDA
            GeneID:7852 -> Molecular function: GO:0043130 [ubiquitin binding] evidence: IDA
            GeneID:7852 -> Biological process: GO:0000187 [activation of MAPK activity] evidence: TAS
            GeneID:7852 -> Biological process: GO:0001569 [patterning of blood vessels] evidence: IEA
            GeneID:7852 -> Biological process: GO:0001666 [response to hypoxia] evidence: IEP
            GeneID:7852 -> Biological process: GO:0001667 [ameboidal cell migration] evidence: IEA
            GeneID:7852 -> Biological process: GO:0001764 [neuron migration] evidence: IEA
            GeneID:7852 -> Biological process: GO:0002407 [dendritic cell chemotaxis] evidence: TAS
            GeneID:7852 -> Biological process: GO:0006915 [apoptotic process] evidence: TAS
            GeneID:7852 -> Biological process: GO:0006954 [inflammatory response] evidence: TAS
            GeneID:7852 -> Biological process: GO:0007186 [G-protein coupled receptor signaling pathway] evidence: IDA
            GeneID:7852 -> Biological process: GO:0007204 [elevation of cytosolic calcium ion concentration] evidence: TAS
            GeneID:7852 -> Biological process: GO:0007281 [germ cell development] evidence: IEA
            GeneID:7852 -> Biological process: GO:0007420 [brain development] evidence: IEA
            GeneID:7852 -> Biological process: GO:0008045 [motor neuron axon guidance] evidence: IEA
            GeneID:7852 -> Biological process: GO:0008354 [germ cell migration] evidence: IEA
            GeneID:7852 -> Biological process: GO:0009615 [response to virus] evidence: TAS
            GeneID:7852 -> Biological process: GO:0016032 [viral process] evidence: TAS
            GeneID:7852 -> Biological process: GO:0019048 [modulation by virus of host morphology or physiology] evidence: IEA
            GeneID:7852 -> Biological process: GO:0019722 [calcium-mediated signaling] evidence: IMP
            GeneID:7852 -> Biological process: GO:0030260 [entry into host cell] evidence: TAS
            GeneID:7852 -> Biological process: GO:0030334 [regulation of cell migration] evidence: IEA
            GeneID:7852 -> Biological process: GO:0042098 [T cell proliferation] evidence: IEA
            GeneID:7852 -> Biological process: GO:0042119 [neutrophil activation] evidence: IEA
            GeneID:7852 -> Biological process: GO:0043217 [myelin maintenance] evidence: ISS
            GeneID:7852 -> Biological process: GO:0048714 [positive regulation of oligodendrocyte differentiation] evidence: ISS
            GeneID:7852 -> Biological process: GO:0050920 [regulation of chemotaxis] evidence: IMP
            GeneID:7852 -> Biological process: GO:0061351 [neural precursor cell proliferation] evidence: IEA
            GeneID:7852 -> Cellular component: GO:0005737 [cytoplasm] evidence: TAS
            GeneID:7852 -> Cellular component: GO:0005886 [plasma membrane] evidence: TAS
            GeneID:7852 -> Cellular component: GO:0009897 [external side of plasma membrane] evidence: IEA
            GeneID:7852 -> Cellular component: GO:0009986 [cell surface] evidence: IDA
            GeneID:7852 -> Cellular component: GO:0016021 [integral to membrane] evidence: IEA
            GeneID:7852 -> Cellular component: GO:0016023 [cytoplasmic membrane-bounded vesicle] evidence: IDA
            GeneID:7852 -> Cellular component: GO:0030426 [growth cone] evidence: IEA
            GeneID:7852 -> Cellular component: GO:0031252 [cell leading edge] evidence: IDA
            GeneID:7852 -> Cellular component: GO:0031410 [cytoplasmic vesicle] evidence: IDA

by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 2.1 Japan License.