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2025-05-09 16:25:23, GGRNA : RefSeq release 60 (20130726)
LOCUS XM_003846770 4194 bp mRNA linear PRI 30-OCT-2012
DEFINITION PREDICTED: Homo sapiens FERM and PDZ domain-containing protein
3-like (LOC100996848), mRNA.
ACCESSION XM_003846770
VERSION XM_003846770.1 GI:397138686
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_001842391) annotated using gene prediction method: GNOMON,
supported by mRNA and EST evidence.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Version :: Homo sapiens Annotation Release 104
Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..4194
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="X"
/sex="male"
/dev_stage="adult"
gene 1..4194
/gene="LOC100996848"
/note="Derived by automated computational analysis using
gene prediction method: GNOMON. Supporting evidence
includes similarity to: 1 mRNA, 1 EST, 1 Protein"
/db_xref="GeneID:100996848"
CDS 1..4116
/gene="LOC100996848"
/codon_start=1
/product="FERM and PDZ domain-containing protein 3-like"
/protein_id="XP_003846818.1"
/db_xref="GI:397138687"
/db_xref="GeneID:100996848"
/translation="
MQEIILRSFSPISQCRLSMYHGSAIQAKLQYLRILNELPTFTGVLFNTVGLDEKQSATTLLVGPRHGISHVIDLKTNLTTVLSEFSKISKIQLFRENQGVARVETSIMDAKPLVLLMEWPEATNFACLIAGYCRLLLDSRKMVFSRPASQPLPPPMIKADYMHSAHRPVTGGHLGKKESSYVGSVGTSPRKSSRCTPPPADSELVSFCYLHMREQRKEQESRTDVNENLIFFEETRPRTKSDPTSKSSGQGYEVVPDDFDAASLDHEPCASRARSYTLDNSLGAEALNFYCDSCKAKLQSSWALANVQTRTVRDHAQELDDALVSTLQALEALAASEDGPHPPPPQTAGLIVLATITPESSLDSGHETNSSELTDMSEMMSAMKQHQNTTYFLAQHLNKDSLLARKDLPFRIQSCAAQAVLTAPYSLGRPDPNPSLQPIATGQSPGPPGARRKLPQSEGQVQGERTYSLAVHPALSPQLSEQKNLSLLSPVPEDKGPGHTRAGLEMSLRAATSSLSEEQVSELRDNLPKEVRLSPKLILDPKSSVTPAIISAALQQVVHNKSLVTAGGALGNPPSRGERRLEASMGRPEVSMMSSSASKNLKFKISPSAPETSWNSQHQLGAEVSSSPRAPTGSRADSLHLSQQEDSLPVQNFPPKSYLLRTSRESVGKQATGEVAGKGGPVGGKPTLQKQGTISSQGEKAQLESTPKRSKLEETSLVPRATYPMALQSPSCQSRSHSPSCQPHGHSPSSQSRGQSPSCQPRGQSPLRSQAASRQVSTMPSRKLETTLNGAHSTSEGPAKPKSSRGPFRLRNLFSATFPTRQKKETDERQAQLQKVKQYELEFLEELLKPPSQGELPGTEYLQPPAPGRCSCQLRSSPVQQGPGMSREQRRSCDCKRICRGGRPQATQTPVPSLRGRERDRVLPSQRQPEAGPGVSLSSPINVQRIRSTSLESRECRSDPESGVSCLTTCASGGECLGAPNYRKLMRRYSISELDQGDRASLTSDVYPHPPLGMLPREAKEVEASLPIALGPKSRSLESPTLGDPSYVQVAPETKGPRQMAVFSLPEEVYRKPAELDEDSESSKCCSIRYCFYYRKCDMADDASDGKDELSYSIPMKILPGMKLDEQVVPVVSRTLQVLDAATCSSSSPEASRTQEIDLRVSTFEGSLAKINALRAHAYGLPDGFLAARLDTNELLTVLRQCVASPEARAPKPYVSQISEYKLELALKFKELRASCRRVANVDKSPTHMLAAITGSFQVLSSLIETFVRLVFIVRSEAQRQELLAKVEEVVRNYTFLLRAAEESTARNLNQQQQQQQQQQQQQQQQQQQQQQQQQQQVAAAAGAATEHPPGSPTSATVMSTFTHSLKTLIK
"
misc_feature 73..432
/gene="LOC100996848"
/note="FERM and PDZ domain containing proteins 1, 3, and 4
(FRMPD1, 3, 4) FERM domain C-lobe; Region:
FERM_C_FRMPD1_FRMPD3_FRMPD4; cd13183"
/db_xref="CDD:241337"
misc_feature order(148..150,208..210,214..216,238..240)
/gene="LOC100996848"
/note="putative phosphoinositide binding site [chemical
binding]; other site"
/db_xref="CDD:241337"
misc_feature order(250..252,268..279,376..378,388..390,397..402)
/gene="LOC100996848"
/note="putative peptide binding site [polypeptide
binding]; other site"
/db_xref="CDD:241337"
misc_feature 376..411
/gene="LOC100996848"
/note="putative actin binding site 2 [polypeptide
binding]; other site"
/db_xref="CDD:241337"
variation 126
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:137932679"
variation 152
/gene="LOC100996848"
/replace="g"
/replace="t"
/db_xref="dbSNP:376425208"
variation 180
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:370791419"
variation 403
/gene="LOC100996848"
/replace="a"
/replace="c"
/db_xref="dbSNP:34409749"
variation 492
/gene="LOC100996848"
/replace="a"
/replace="c"
/db_xref="dbSNP:186977626"
variation 536
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:371411843"
variation 540
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:374674303"
variation 575
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:191464475"
variation 613
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:372050912"
variation 660
/gene="LOC100996848"
/replace="a"
/replace="c"
/db_xref="dbSNP:370166755"
variation 713
/gene="LOC100996848"
/replace="c"
/replace="g"
/db_xref="dbSNP:373975442"
variation 747
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:369440568"
variation 759
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:368170440"
variation 777
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:372982632"
variation 821
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:371922832"
variation 912
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:375326152"
variation 927
/gene="LOC100996848"
/replace="a"
/replace="c"
/db_xref="dbSNP:368777146"
variation 978
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:145396655"
variation 1045
/gene="LOC100996848"
/replace="c"
/replace="g"
/db_xref="dbSNP:371835150"
variation 1056
/gene="LOC100996848"
/replace="c"
/replace="g"
/db_xref="dbSNP:372062988"
variation 1158
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:369613160"
variation 1342
/gene="LOC100996848"
/replace="c"
/replace="g"
/db_xref="dbSNP:185843306"
variation 1348
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:191059172"
variation 1352
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:376522247"
variation 1374
/gene="LOC100996848"
/replace="c"
/replace="g"
/db_xref="dbSNP:199655203"
variation 1503
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:181763252"
variation 1508
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:370132530"
variation 1581
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:186103884"
variation 1608
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:373805434"
variation 1679
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:190679656"
variation 1717
/gene="LOC100996848"
/replace="a"
/replace="c"
/db_xref="dbSNP:200539181"
variation 1733
/gene="LOC100996848"
/replace="a"
/replace="c"
/db_xref="dbSNP:370622567"
variation 1779
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:374045884"
variation 1910
/gene="LOC100996848"
/replace="a"
/replace="c"
/db_xref="dbSNP:368183217"
variation 1935
/gene="LOC100996848"
/replace="c"
/replace="g"
/db_xref="dbSNP:372120953"
variation 1978
/gene="LOC100996848"
/replace="g"
/replace="t"
/db_xref="dbSNP:202060665"
variation 2080
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:368156988"
variation 2102
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:368612181"
variation 2103
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:371578570"
variation 2106
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:183335708"
variation 2274
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:376036356"
variation 2283
/gene="LOC100996848"
/replace="a"
/replace="t"
/db_xref="dbSNP:188122545"
variation 2408
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:371957266"
variation 2425
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:375298972"
variation 2426
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:369738439"
variation 2431
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:373259744"
variation 2432
/gene="LOC100996848"
/replace="c"
/replace="g"
/db_xref="dbSNP:376386766"
variation 2508
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:369941771"
variation 2576
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:373481868"
variation 2648
/gene="LOC100996848"
/replace="c"
/replace="g"
/db_xref="dbSNP:148049673"
variation 2674..2675
/gene="LOC100996848"
/replace="ag"
/replace="cc"
/db_xref="dbSNP:34637928"
variation 2694
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:190160063"
variation 2721
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:376909950"
variation 2743
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:370214613"
variation 2748
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:373240414"
variation 2784
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:372464381"
variation 2850
/gene="LOC100996848"
/replace="c"
/replace="g"
/db_xref="dbSNP:183198624"
variation 2858
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:187380964"
variation 2916
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:370910242"
variation 2922
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:375806865"
variation 2923
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:368320134"
variation 3041
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:192528349"
variation 3054
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:377184517"
variation 3122
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:371181317"
variation 3152
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:376134061"
variation 3183
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:367580716"
variation 3222
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:371522221"
variation 3226
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:376108129"
variation 3231
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:368141801"
variation 3237
/gene="LOC100996848"
/replace="c"
/replace="g"
/db_xref="dbSNP:371873767"
variation 3333
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:41305439"
variation 3369
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:369848619"
variation 3376
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:369595159"
variation 3457
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:373286272"
variation 3600
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:111780917"
variation 3658
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:375881611"
variation 3709
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:369146286"
variation 3713
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:372678985"
variation 3728
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:185438129"
variation 3777
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:377153221"
variation 3805
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:370528952"
variation 3823
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:373878659"
variation 3828
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:377611123"
STS 3909..4079
/gene="LOC100996848"
/standard_name="STS-X85323"
/db_xref="UniSTS:57076"
variation 3949
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:200957790"
variation 3972..3973
/gene="LOC100996848"
/replace=""
/replace="cag"
/db_xref="dbSNP:201186557"
variation 3972
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:367997323"
variation 3990
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:41304446"
variation 4064
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:201630117"
variation 4065
/gene="LOC100996848"
/replace="a"
/replace="g"
/db_xref="dbSNP:141655380"
variation 4133
/gene="LOC100996848"
/replace="c"
/replace="t"
/db_xref="dbSNP:370956101"
ORIGIN
atgcaggagataattctcaggtccttttcaccaattagtcagtgccgactgagcatgtatcatggctctgcaattcaggcaaagctccagtatctacgaattctgaatgaacttcctaccttcacgggcgttttgttcaacactgtaggcctggatgagaagcagtcggccaccacgctcctggtgggaccccgtcatggcatcagccatgttattgacctcaaaaccaacctcaccactgtgctgtccgagttcagcaagatcagcaagatccagctgttccgggagaaccagggcgtggcccgggtggagaccagcatcatggatgccaagcctctggtgctgttgatggagtggcctgaagccaccaactttgcctgcctgatcgcggggtactgccgcctcttgctggattccaggaagatggtcttctccaggcctgccagccagccacttccacctccaatgatcaaggcagattacatgcacagcgcccaccgccctgtcactgggggccacctggggaaaaaggagagtagttatgtgggcagcgtgggcaccagccccaggaaatcgagccgctgcacgcccccacctgccgactctgagcttgtcagcttctgctacctccatatgcgggaacaaaggaaggagcaggaaagccggacagatgtcaacgagaacctaatcttctttgaggagaccaggccccgaaccaagtctgaccccacatccaaaagctctggccaaggttatgaggtagtccctgatgactttgatgcagctagcctagaccacgagccttgtgccagcagggcccggtcctacaccttggacaattcccttggggctgaagccctgaatttctactgtgactcttgcaaagccaaacttcagagcagctgggccctcgcaaatgtgcagacccggacagttcgagatcatgcccaggagctagatgatgccctggtgtccactctgcaggctctagaagccctggctgcatccgaggatggaccacacccaccacccccacagactgcaggtctgattgtgctggccacaatcactcctgaatcatcgctggactcaggtcatgaaaccaactcttcagagctcacagacatgtcagagatgatgtcggccatgaagcagcaccagaacaccacctacttcctggcccagcacctcaacaaggacagcctccttgcccgcaaggacctgcccttccggatccagagctgtgcagcccaggccgttcttacggccccttactctcttgggcgcccggatcccaacccatctctccaacccattgccacaggccagagtcctggcccccctggcgctcggaggaagctgccccagtcagagggccaggtacagggagaacgaacatactccttggcagtgcacccagcactgtccccacagcttagtgaacagaagaatctgagtctgctgtccccagttcctgaggacaaagggcctggccacactagggcaggcctagaaatgtcactgagggcagccacatcatccctcagtgaagagcaggtctctgagctgagggacaacctgcccaaggaggtcaggttgagccccaagcttatcctcgacccaaagagcagtgtgacccctgccatcatctcggccgccctacagcaagtggttcacaataagagtctagtcactgctggtggggctttggggaacccccccagcaggggtgagagaaggctggaggccagcatggggaggccagaggttagcatgatgagcagcagtgccagtaagaatctgaagttcaaaattagccccagtgctccagagacctcatggaattctcaacatcagctgggtgcagaggtctcttccagccccagagcacccacaggcagccgggctgacagcctgcacctctcccaacaagaggacagtctgcctgttcaaaatttccctcccaaaagctatcttttgcgaacaagccgagagtcagtgggcaagcaagctacaggggaggtggcaggcaaaggcgggccagtgggtggtaagcccaccctgcagaagcagggcaccatctccagccaaggggagaaggcgcagctggagagcacacccaaaagaagcaagctcgaagagaccagcctggttccccgagctacctaccccatggctctgcagagccccagctgccagtcaagaagccacagccccagctgccagcctcatggccacagccccagcagccagtctcgaggtcagagccccagctgccaacctcgaggccagagcccactgaggtctcaggctgccagccggcaggtgagcaccatgccctctaggaagcttgaaacaactctcaatggagcccactcgacctctgaaggccctgccaaacccaagtcatcccgaggtcctttccggctacgcaatttattctctgccaccttcccaacccgccagaagaaggagacagatgagcggcaggcccaactgcagaaggtaaagcagtatgaactggagttccttgaggaacttctaaagccaccaagccagggggagctgccaggcaccgagtacctgcaacctccagcacctggccgctgcagctgccagctccgcagcagccctgtgcagcaggggcctggcatgtcccgtgagcagaggcgcagctgtgactgcaagcgcatctgccgggggggccggccacaagccacccagacaccagtgcccagcctccgggggagggaaagggacagagtcctccctagccagaggcagccagaggctggcccaggcgtgagcctcagcagccccatcaatgtccagcgcattcgttctaccagcctggagtcccgagagtgccgatcggaccctgagagtggtgtttcgtgcctgaccacgtgtgcctcggggggcgagtgtctgggagctcccaattacaggaaactgatgcgccgctacagtatcagtgagctggaccagggtgacagggcctcgctgacctcggatgtctacccacatcctcccctgggcatgctgcccagggaggccaaggaggtagaggcaagcctccccatagccttgggtcccaaaagcaggtctctggagtcaccgacgctgggagacccctcctacgtccaggttgccccagagaccaaaggccccagacagatggccgtgttctcactgcccgaggaggtgtaccggaagcctgccgagctagacgaggacagtgagagcagcaagtgctgctccatccgctactgcttctactaccgcaagtgtgacatggcagatgatgccagtgatggcaaggatgagctctcctactctatccccatgaagatcctgcctggcatgaagctggacgagcaggtggtgcctgtggtgagcaggaccctgcaggtgctggatgctgctacctgcagcagcagcagccctgaggcctcccgcactcaggagattgacctccgtgtgtccaccttcgaggggagcctggccaagatcaatgccctgcgggcccatgcctatggcctccctgatggcttcctggctgcccggctggacaccaacgagctgctgacagtcctgcggcagtgtgtggccagccccgaggcccgtgcccccaagccctatgtgtctcagatctccgagtataagcttgagctagctctcaagttcaaggagctccgggcctcctgccgccgtgtggccaatgtggacaagagcccaactcacatgctggcagccatcacgggcagcttccaggtgctgagcagcctcattgagaccttcgtgcggctggtgttcattgtgcgctccgaggcccagcgccaagagctgctggccaaggtagaagaggtggtgaggaactacaccttcctgctgcgtgcagctgaggagtccacagcccgtaaccttaaccagcagcagcagcaacaacaacagcagcagcagcaacaacaacagcagcagcaacaacaacagcagcagcagcagcagcaggtggcagcagctgcaggggcagccacagagcatccaccaggctccccaacttcggcgactgttatgagcacattcacccactccttaaaaacccttattaagtagggcatctgcccacacctgtcccccttccccaaccatggccccaggtttgagctttgtggtccttgcatcttgtggtga
//
by
@meso_cacase at
DBCLS
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