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2025-05-09 17:08:41, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_201435 3228 bp mRNA linear PRI 17-APR-2013
DEFINITION Homo sapiens coiled-coil domain containing 62 (CCDC62), transcript
variant 2, mRNA.
ACCESSION NM_201435
VERSION NM_201435.4 GI:330864793
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3228)
AUTHORS Nalls,M.A., Plagnol,V., Hernandez,D.G., Sharma,M., Sheerin,U.M.,
Saad,M., Simon-Sanchez,J., Schulte,C., Lesage,S.,
Sveinbjornsdottir,S., Stefansson,K., Martinez,M., Hardy,J.,
Heutink,P., Brice,A., Gasser,T., Singleton,A.B. and Wood,N.W.
CONSRTM International Parkinson Disease Genomics Consortium
TITLE Imputation of sequence variants for identification of genetic risks
for Parkinson's disease: a meta-analysis of genome-wide association
studies
JOURNAL Lancet 377 (9766), 641-649 (2011)
PUBMED 21292315
REFERENCE 2 (bases 1 to 3228)
AUTHORS Domae,S., Nakamura,Y., Nakamura,Y., Uenaka,A., Wada,H., Nakata,M.,
Oka,M., Kishimoto,K., Tsukamoto,G., Yoshihama,Y., Matsuoka,J.,
Gochi,A., Kohno,S., Saika,T., Sasaki,A., Nakayama,E. and Ono,T.
TITLE Identification of CCDC62-2 as a novel cancer/testis antigen and its
immunogenicity
JOURNAL Int. J. Cancer 124 (10), 2347-2352 (2009)
PUBMED 19165854
REMARK GeneRIF: serological survey of 191 cancer patients with a range of
different cancers by ELISA revealed antibodies to CCDC62-2 in 13
patients, including stomach cancer
REFERENCE 3 (bases 1 to 3228)
AUTHORS Chen,M., Ni,J., Chang,H.C., Lin,C.Y., Muyan,M. and Yeh,S.
TITLE CCDC62/ERAP75 functions as a coactivator to enhance estrogen
receptor beta-mediated transactivation and target gene expression
in prostate cancer cells
JOURNAL Carcinogenesis 30 (5), 841-850 (2009)
PUBMED 19126643
REMARK GeneRIF: Role of CCDC62/ERAP75 as a novel coactivator in prostate
cancer cells that can modulate estrogen receptor beta
transactivation and receptor function.
REFERENCE 4 (bases 1 to 3228)
AUTHORS Chen,M., Ni,J., Zhang,Y., Muyan,M. and Yeh,S.
TITLE ERAP75 functions as a coactivator to enhance estrogen receptor
alpha transactivation in prostate stromal cells
JOURNAL Prostate 68 (12), 1273-1282 (2008)
PUBMED 18563714
REMARK GeneRIF: ERAP75 functions as a novel coactivator that can modulate
ER alpha function in the prostate stromal cells.
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
DB458565.1, AK292466.1, BC060796.1, CD556476.1 and AC027290.31.
On Apr 28, 2011 this sequence version replaced gi:219804067.
Transcript Variant: This variant (2) represents the longer
transcript and encodes the supported protein.
##Evidence-Data-START##
Transcript exon combination :: BC060796.1, AK292466.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
ERS025084, ERS025085 [ECO:0000348]
##Evidence-Data-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-92 DB458565.1 1-92
93-1617 AK292466.1 1-1525
1618-2594 BC060796.1 1601-2577
2595-3050 BC060796.1 2579-3034
3051-3141 CD556476.1 380-470
3142-3142 AC027290.31 102323-102323 c
3143-3228 CD556476.1 472-557
FEATURES Location/Qualifiers
source 1..3228
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="12"
/map="12q24.31"
gene 1..3228
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/note="coiled-coil domain containing 62"
/db_xref="GeneID:84660"
/db_xref="HGNC:30723"
/db_xref="MIM:613481"
exon 1..198
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/inference="alignment:Splign:1.39.8"
variation 11
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="g"
/replace="t"
/db_xref="dbSNP:12817758"
variation 26..28
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace=""
/replace="tac"
/db_xref="dbSNP:148850824"
variation 61
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:372247033"
variation 68
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:111579505"
misc_feature 118..120
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/note="upstream in-frame stop codon"
variation 144
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="g"
/db_xref="dbSNP:151079729"
CDS 163..2217
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/note="cancer/testis antigen 109; testis-specific protein
TSP-NY; coiled-coil domain-containing protein 60;
aaa-protein"
/codon_start=1
/product="coiled-coil domain-containing protein 62"
/protein_id="NP_958843.2"
/db_xref="GI:75677376"
/db_xref="CCDS:CCDS9238.1"
/db_xref="GeneID:84660"
/db_xref="HGNC:30723"
/db_xref="MIM:613481"
/translation="
MNPPAAFLAGRQNIGSEVEISTIEKQRKELQLLIGELKDRDKELNDMVAVHQQQLLSWEEDRQKVLTLEERCSKLEGELHKRTEIIRSLTKKVKALESNQMECQTALQKTQLQLQEMAQKATHSSLLSEDLEARNETLSNTLVELSAQVGQLQAREQALTTMIKLKDKDIIEAVNHIADCSGKFKMLEHALRDAKMAETCIVKEKQDYKQKLKALKIEVNKLKEDLNEKTTENNEQREEIIRLKQEKSCLHDELLFTVEREKRKDELLNIAKSKQERTNSELHNLRQIYVKQQSDLQFLNFNVENSQELIQMYDSKMEESKALDSSRDMCLSDLENNHPKVDIKREKNQKSLFKDQKFEAMLVQQNRSDKSSCDECKEKKQQIDTVFGEKSVITLSSIFTKDLVEKHNLPWSLGGKTQIEPENKITLCKIHTKSPKCHGTGVQNEGKQPSETPTLSDEKQWHDVSVYLGLTNCPSSKHPEKLDVECQDQMERSEISCCQKNEACLGESGMCDSKCCHPSNFIIEAPGHMSDVEWMSIFKPSKMQRIVRLKSGCTCSESICGTQHDSPASELIAIQDSHSLGSSKSALREDETESSSNKKNSPTSLLIYKDAPAFNEKASIVLPSQDDFSPTSKLQRLLAESRQMVTDLELSTLLPISHENLTGSATNKSEVPEESAQKNTFVSY
"
misc_feature <232..>1023
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/note="chromosome segregation protein SMC, common
bacterial type; Region: SMC_prok_B; TIGR02168"
/db_xref="CDD:162739"
misc_feature 2062..2076
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q6P9F0.2);
Region: LXXLL motif 1"
misc_feature 2110..2124
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/experiment="experimental evidence, no additional details
recorded"
/note="propagated from UniProtKB/Swiss-Prot (Q6P9F0.2);
Region: LXXLL motif 2"
variation 170
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:12227055"
variation 174
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="g"
/db_xref="dbSNP:369682662"
exon 199..391
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/inference="alignment:Splign:1.39.8"
variation 204
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:61956960"
variation 205
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:374092851"
variation 234
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:151048978"
variation 241
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:150571965"
variation 250
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:374508446"
variation 296
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:150209191"
variation 346
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:139160168"
variation 350
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:140576142"
variation 362
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="g"
/db_xref="dbSNP:367722748"
variation 373
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:200927471"
variation 374
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:187710081"
exon 392..558
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/inference="alignment:Splign:1.39.8"
variation 407
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:201788426"
variation 415
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="c"
/db_xref="dbSNP:369606370"
variation 431
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:376082452"
variation 434
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:372877789"
variation 474
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:376000949"
variation 477
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:147096647"
variation 528
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:145920110"
variation 552
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:139405893"
variation 555
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:149651954"
exon 559..660
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/inference="alignment:Splign:1.39.8"
variation 570
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="c"
/db_xref="dbSNP:144393165"
variation 584
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:58131754"
variation 595
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:371220451"
variation 626
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:201035846"
exon 661..832
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/inference="alignment:Splign:1.39.8"
variation 690
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:115194113"
variation 705
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:202102090"
variation 719
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:369692800"
variation 726
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:367893523"
variation 737
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:141243392"
variation 753
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:145960478"
variation 772
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:370209442"
variation 776
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="c"
/db_xref="dbSNP:202205961"
variation 783
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="g"
/replace="t"
/db_xref="dbSNP:199854554"
variation 809
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:368758447"
variation 828
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:79659982"
exon 833..934
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/inference="alignment:Splign:1.39.8"
variation 858
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:369757219"
variation 864
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:368390008"
variation 869
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="c"
/db_xref="dbSNP:372331925"
variation 872
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:143361087"
variation 915
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:113175341"
variation 916
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:375333901"
exon 935..1023
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/inference="alignment:Splign:1.39.8"
variation 947
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:79287693"
variation 973
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="g"
/replace="t"
/db_xref="dbSNP:146255239"
variation 1009
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:139198472"
exon 1024..1139
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/inference="alignment:Splign:1.39.8"
variation 1047
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:369637049"
variation 1093
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:373556095"
variation 1100
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="t"
/db_xref="dbSNP:78361567"
variation 1116
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="g"
/db_xref="dbSNP:189466786"
variation 1139
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:369413638"
exon 1140..1868
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/inference="alignment:Splign:1.39.8"
variation 1147
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:375704989"
variation 1149
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:370023254"
variation 1177
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:373036488"
variation 1186
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:188186254"
variation 1194
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:145104217"
variation 1225
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:201433522"
variation 1244
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:141587850"
variation 1246
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:192803603"
variation 1254
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:61735889"
variation 1316
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:201538122"
variation 1319
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:147898872"
variation 1343
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="c"
/db_xref="dbSNP:17855031"
variation 1344
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:61740012"
variation 1407
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:147086755"
variation 1426
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:148126897"
variation 1439
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:374651077"
variation 1441
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:370837800"
variation 1447
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:141048617"
variation 1481
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="g"
/db_xref="dbSNP:199705995"
variation 1494
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:150261986"
variation 1577
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:368745484"
variation 1580
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:138955637"
variation 1584
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:149451449"
variation 1617
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:200798716"
variation 1623
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:201037164"
variation 1638
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:145950256"
variation 1680
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:375118548"
variation 1685
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="g"
/db_xref="dbSNP:376779932"
variation 1694
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:138584723"
variation 1727
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:370139805"
variation 1737
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:369870434"
variation 1738
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="g"
/db_xref="dbSNP:141689290"
variation 1739
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:376712102"
variation 1740
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:150075525"
variation 1755
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:371690932"
variation 1756
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:75175797"
variation 1833
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="c"
/db_xref="dbSNP:199891405"
variation 1845
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:201564203"
exon 1869..2013
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/inference="alignment:Splign:1.39.8"
variation 1884
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:373242049"
variation 1917
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="g"
/replace="t"
/db_xref="dbSNP:200012251"
variation 1937
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:142626019"
variation 1938
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:377321233"
variation 1993
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="g"
/replace="t"
/db_xref="dbSNP:201866869"
exon 2014..2163
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/inference="alignment:Splign:1.39.8"
variation 2049
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:202236225"
variation 2054
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:200979651"
variation 2068
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:371482324"
variation 2099
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:55716280"
variation 2126
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="g"
/db_xref="dbSNP:143536297"
variation 2129
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:376927819"
variation 2136
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="t"
/db_xref="dbSNP:374420339"
exon 2164..2257
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/inference="alignment:Splign:1.39.8"
variation 2230
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="g"
/replace="t"
/db_xref="dbSNP:200202162"
variation 2253
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="g"
/db_xref="dbSNP:202202427"
exon 2258..3216
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/inference="alignment:Splign:1.39.8"
variation 2265
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:372780491"
variation 2273
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace=""
/replace="g"
/db_xref="dbSNP:142613451"
variation 2315
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="g"
/db_xref="dbSNP:375300897"
variation 2316
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:369582885"
variation 2350
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:373050690"
variation 2531
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:376644444"
variation 2532
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:77166802"
variation 2591..2593
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace=""
/replace="c"
/db_xref="dbSNP:11386478"
variation 2591
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="g"
/replace="t"
/db_xref="dbSNP:199687133"
variation 2646
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="c"
/db_xref="dbSNP:189477057"
variation 2712
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:192618034"
variation 2726
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:371534338"
variation 2751
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="g"
/replace="t"
/db_xref="dbSNP:140885543"
STS 2780..2899
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/standard_name="RH98639"
/db_xref="UniSTS:89096"
variation 2794
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="g"
/db_xref="dbSNP:112414182"
variation 2802
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="t"
/db_xref="dbSNP:144960017"
variation 3101
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="c"
/replace="t"
/db_xref="dbSNP:376826347"
variation 3142
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:10773627"
variation 3188
/gene="CCDC62"
/gene_synonym="CT109; ERAP75; TSP-NY"
/replace="a"
/replace="g"
/db_xref="dbSNP:188691888"
ORIGIN
gtgggcaccaggcaggcggttggagtacggggcgggggtcggccgagggcgcggggccccggggctccgggctcgcccccgccgctcggggcaggcgcgccgatggcgtttctgaggtgacgccgcccacaccgggcttctccgggggcggaggaaacacctatgaaccctccggcagccttccttgccgggcgccagaacatcgggtcagaagttgagatttccactatcgagaaacaacggaaggagctgcagttgctcattggagaattaaaagatcgagataaagagctcaatgacatggttgcagtgcaccagcaacagcttctttcatgggaagaggatcggcagaaagtgttgacactggaagaacgttgcagcaaattagaaggtgaactacataaaagaactgaaataatcaggtcactcacgaagaaggtaaaagctcttgaatccaatcaaatggaatgccaaacagctctccaaaagacccaactacagcttcaggaaatggctcaaaaggcaacgcattcttctcttctctctgaagaccttgaggctagaaacgaaactctcagcaacacgttagtggaactttctgcccaggtaggacagctacaagctcgagaacaagctcttacgacaatgataaagctaaaggacaaagatattattgaggcagttaatcacattgcagattgttcgggtaaatttaaaatgctagagcatgccctacgtgatgccaagatggcggagacttgtattgtgaaagaaaagcaagattataagcagaaattgaaggcacttaagattgaagtcaacaaactaaaagaggacctcaatgaaaagacgacagaaaataatgagcaacgagaagagatcattcgcctcaagcaagagaaaagttgcctgcacgatgaattgctttttactgtagagagagaaaagaggaaagatgaattgcttaatattgcgaagtcaaagcaagaacgcacaaattcagaactgcacaatctgagacagatttatgtaaaacaacagagtgatctgcagtttcttaatttcaatgtggaaaattctcaggaattaatacagatgtatgactcaaagatggaggaatcaaaggctctggactccagcagagacatgtgtttatcagaccttgaaaataaccacccaaaagtcgatattaagagggaaaaaaatcagaagtcactgtttaaggaccagaaatttgaagccatgttggttcagcaaaataggtcagacaagagctcttgcgatgaatgcaaagagaagaaacaacagatcgatactgtgtttggggagaaaagtgtaattacgctgtcatccatattcaccaaagacttagtagagaaacacaacctcccttggtctctgggaggaaaaacccagattgaacccgaaaacaaaattacattgtgcaagatccacacaaaatcaccaaaatgtcatggcactggggttcagaacgaaggaaaacaaccctcagaaacacccactttatctgatgagaagcagtggcatgatgtcagtgtttacctgggcctgaccaactgtccaagttcaaaacatccagaaaagctggatgtagaatgtcaagatcagatggaaaggtccgaaatctcatgctgccagaaaaatgaagcctgtctgggcgaaagtggcatgtgtgactccaagtgctgccacccgagtaacttcataattgaagccccaggccacatgtctgacgtggagtggatgagtattttcaagccttccaaaatgcagagaattgtccgcctcaaatctgggtgcacctgttcagaaagcatctgtggcacacaacatgactccccggcaagtgagctaattgccatccaagattcccactctttgggttcttcaaaatctgccttgagagaagatgagacggagtcctcttccaataaaaagaactcacctacgagtttgttaatctacaaagatgcaccagcattcaatgaaaaggcttcaattgtgttaccctcccaggatgatttctcgcccacgagcaagctccagcgtttgctggcggaatctcgtcagatggtgacggacctggagctgagcacactgctgcccatcagccatgagaatctcactggcagtgccacaaataagtcagaggtcccagaagagtcagctcaaaaaaatacctttgtcagttattgaaggaaacaaaaggcaacttcagtattcatcgtgatcacgaatttctcatctatgtggaaggcagaaagcagacaccaatactgaatgaatacttaaccgtaaaactgaaagaggattctagttcttcataaacggcacttaattccagctgggagcagaactagaaagttaatttttaaacatctacacttcattttcaagttaaccatttttgtgctgaagaaatattttcatgtgtaagaaagtagaccttattgtacatatagaaagttggaattatgctaagaatgaaaaagacttctctgtaaagatacggactacagttaaatgctagagaagctctttaaaaatgtgaatgtcaaatagagaaagaaccctgcatagaaagtgctgttttaactatctgatttttaaaaaatctgtgcatacatttaaattctaaacaatagcttatcagagtcagctcaaaatatatgagaaacagtattctctcatggttttagcttttgactttgctgtgtaaatagacataaggtgctttgatataaaatataaaatgtaactggaaaatagctcgaggtccttctgtcccaagctgagcagagccccatctttctgggtctatattagtcccacctactgacacaaacaaaagcttgctggaagatcgagttttagacgcatttttaaaaatcttaaagactaaaacacttccattttaacttgtaaagtaatttaattttttaaagattatactatatgcctctgtgtcttctctaaaagaatagatcaacttcagtccataaaagatatttttaatattaaagaaaaaatatgtttccttggtttctttttattttacaggagtaaaataaggaaggaacgttcatcactttaaactgaacctggcaagttaatttcctcaggaatggggatgtatttttttaagcattgcagatatcaaagttctattgtgctgaataaatgcccctttgttaaaaaaaaaaaaaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:84660 -> Cellular component: GO:0005634 [nucleus] evidence: IDA
GeneID:84660 -> Cellular component: GO:0005730 [nucleolus] evidence: IDA
GeneID:84660 -> Cellular component: GO:0005737 [cytoplasm] evidence: IEA
GeneID:84660 -> Cellular component: GO:0005886 [plasma membrane] evidence: IDA
by
@meso_cacase at
DBCLS
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