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2025-05-09 17:09:32, GGRNA : RefSeq release 60 (20130726)
LOCUS NM_001207033 6019 bp mRNA linear PRI 12-MAY-2013
DEFINITION Homo sapiens ring finger protein 40, E3 ubiquitin protein ligase
(RNF40), transcript variant 2, mRNA.
ACCESSION NM_001207033
VERSION NM_001207033.1 GI:333440439
KEYWORDS RefSeq.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6019)
AUTHORS Chernikova,S.B., Razorenova,O.V., Higgins,J.P., Sishc,B.J.,
Nicolau,M., Dorth,J.A., Chernikova,D.A., Kwok,S., Brooks,J.D.,
Bailey,S.M., Game,J.C. and Brown,J.M.
TITLE Deficiency in mammalian histone H2B ubiquitin ligase Bre1
(Rnf20/Rnf40) leads to replication stress and chromosomal
instability
JOURNAL Cancer Res. 72 (8), 2111-2119 (2012)
PUBMED 22354749
REMARK GeneRIF: We show that Bre1 (human BRE1A/B (RNF20/40) and mouse
Bre1a/b (Rnf20/40)) acts as an important suppressor of chromosomal
instability
REFERENCE 2 (bases 1 to 6019)
AUTHORS Jaaskelainen,T., Makkonen,H., Visakorpi,T., Kim,J., Roeder,R.G. and
Palvimo,J.J.
TITLE Histone H2B ubiquitin ligases RNF20 and RNF40 in androgen signaling
and prostate cancer cell growth
JOURNAL Mol. Cell. Endocrinol. 350 (1), 87-98 (2012)
PUBMED 22155569
REMARK GeneRIF: our results suggest that RNF20 and RNF40, either via
ubiquitylation of H2B or other targets, are coupled to the
proliferation of prostate cancer cells.
REFERENCE 3 (bases 1 to 6019)
AUTHORS Kari,V., Shchebet,A., Neumann,H. and Johnsen,S.A.
TITLE The H2B ubiquitin ligase RNF40 cooperates with SUPT16H to induce
dynamic changes in chromatin structure during DNA double-strand
break repair
JOURNAL Cell Cycle 10 (20), 3495-3504 (2011)
PUBMED 22031019
REMARK GeneRIF: RNF40 cooperates with SUPT16H to induce dynamic changes in
chromatin structure during DNA double-strand break repair.
REFERENCE 4 (bases 1 to 6019)
AUTHORS Shiloh,Y., Shema,E., Moyal,L. and Oren,M.
TITLE RNF20-RNF40: A ubiquitin-driven link between gene expression and
the DNA damage response
JOURNAL FEBS Lett. 585 (18), 2795-2802 (2011)
PUBMED 21827756
REMARK GeneRIF: Studies indicate that H2B monoubiquitylation is driven
primarily by an E3 ubiquitin ligase composed of the two RING finger
proteins RNF20 and RNF40.
Review article
REFERENCE 5 (bases 1 to 6019)
AUTHORS Chernikova,S.B., Dorth,J.A., Razorenova,O.V., Game,J.C. and
Brown,J.M.
TITLE Deficiency in Bre1 impairs homologous recombination repair and cell
cycle checkpoint response to radiation damage in mammalian cells
JOURNAL Radiat. Res. 174 (5), 558-565 (2010)
PUBMED 20738173
REMARK GeneRIF: the observed defects in the radiation response of
Bre1a/b-deficient cells
REFERENCE 6 (bases 1 to 6019)
AUTHORS Kim,J., Guermah,M., McGinty,R.K., Lee,J.S., Tang,Z., Milne,T.A.,
Shilatifard,A., Muir,T.W. and Roeder,R.G.
TITLE RAD6-Mediated transcription-coupled H2B ubiquitylation directly
stimulates H3K4 methylation in human cells
JOURNAL Cell 137 (3), 459-471 (2009)
PUBMED 19410543
REFERENCE 7 (bases 1 to 6019)
AUTHORS Zhu,B., Zheng,Y., Pham,A.D., Mandal,S.S., Erdjument-Bromage,H.,
Tempst,P. and Reinberg,D.
TITLE Monoubiquitination of human histone H2B: the factors involved and
their roles in HOX gene regulation
JOURNAL Mol. Cell 20 (4), 601-611 (2005)
PUBMED 16307923
REMARK GeneRIF: Formation of trimeric complex UbcH6 and RNF20/40 with PAF
stimulates histone 2B monoubiquitination activity in vitro
REFERENCE 8 (bases 1 to 6019)
AUTHORS Chin,L.S., Vavalle,J.P. and Li,L.
TITLE Staring, a novel E3 ubiquitin-protein ligase that targets syntaxin
1 for degradation
JOURNAL J. Biol. Chem. 277 (38), 35071-35079 (2002)
PUBMED 12121982
REMARK GeneRIF: Functional Analysis of the rat counterpart
REFERENCE 9 (bases 1 to 6019)
AUTHORS Wen,H. and Ao,S.
TITLE RBP95, a novel leucine zipper protein, binds to the retinoblastoma
protein
JOURNAL Biochem. Biophys. Res. Commun. 275 (1), 141-148 (2000)
PUBMED 10944455
COMMENT REVIEWED REFSEQ: This record has been curated by NCBI staff. The
reference sequence was derived from AC106886.3, AB014561.1,
AK291666.1 and AI373490.1.
Summary: The protein encoded by this gene contains a RING finger, a
motif known to be involved in protein-protein and protein-DNA
interactions. This protein was reported to interact with the tumor
suppressor protein RB1. Studies of the rat counterpart suggested
that this protein may function as an E3 ubiquitin-protein ligase,
and facilitate the ubiquitination and degradation of syntaxin 1,
which is an essential component of the neurotransmitter release
machinery. Multiple alternatively spliced transcript variants
encoding different isoforms have been found for this gene.
[provided by RefSeq, May 2011].
Transcript Variant: This variant (2) has an alternate splice site
in the coding region, compared to variant 1. The resulting isoform
(2) lacks an internal aa, compared to isoform 1.
Sequence Note: This RefSeq record was created from transcript and
genomic sequence data to make the sequence consistent with the
reference genome assembly. The genomic coordinates used for the
transcript record were based on transcript alignments.
##Evidence-Data-START##
Transcript exon combination :: AK291666.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
ERS025084, ERS025091 [ECO:0000348]
##Evidence-Data-END##
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-728 AC106886.3 140545-141272
729-1918 AB014561.1 1-1190
1919-4021 AK291666.1 1209-3311
4022-5609 AC106886.3 153246-154833
5610-6019 AI373490.1 1-410 c
FEATURES Location/Qualifiers
source 1..6019
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/chromosome="16"
/map="16p11.2-p11.1"
gene 1..6019
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/note="ring finger protein 40, E3 ubiquitin protein
ligase"
/db_xref="GeneID:9810"
/db_xref="HGNC:16867"
/db_xref="MIM:607700"
exon 1..749
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/inference="alignment:Splign:1.39.8"
variation 56
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:201918052"
variation 102
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:181301950"
variation 216
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:142652932"
variation 243
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:368063124"
variation 293
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:114846242"
variation 380
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/replace="t"
/db_xref="dbSNP:62057185"
variation 519
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:374039649"
variation 666..667
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace=""
/replace="g"
/db_xref="dbSNP:141812412"
variation 667..668
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace=""
/replace="c"
/db_xref="dbSNP:199859165"
variation 671..672
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace=""
/replace="c"
/db_xref="dbSNP:376493317"
variation 672..673
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace=""
/replace="t"
/db_xref="dbSNP:111298574"
variation 673
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="c"
/db_xref="dbSNP:3812999"
misc_feature 731..733
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/note="upstream in-frame stop codon"
variation 743
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:185778178"
exon 750..952
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/inference="alignment:Splign:1.39.8"
variation 766
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:112478319"
variation 776
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:1550477"
variation 785
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:373061072"
variation 792
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="g"
/db_xref="dbSNP:141744543"
CDS 821..3823
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/EC_number="6.3.2.-"
/note="isoform 2 is encoded by transcript variant 2; BRE1
E3 ubiquitin ligase homolog B; 95 kDa retinoblastoma
protein binding protein; Rb-associated protein; E3
ubiquitin-protein ligase BRE1B; BRE1-B; 95 kDa
retinoblastoma-associated protein"
/codon_start=1
/product="E3 ubiquitin-protein ligase BRE1B isoform 2"
/protein_id="NP_001193962.1"
/db_xref="GI:333440440"
/db_xref="GeneID:9810"
/db_xref="HGNC:16867"
/db_xref="MIM:607700"
/translation="
MSGPGNKRAAGDGGSGPPEKKLSREEKTTTTLIEPIRLGGISSTEEMDLKVLQFKNKKLAERLEQRQACEDELRERIEKLEKRQATDDATLLIVNRYWAQLDETVEALLRCHESQGELSSAPEAPGTQEGPTCDGTPLPEPGTSELRDPLLMQLRPPLSEPALAFVVALGASSSEEVELELQGRMEFSKAAVSRVVEASDRLQRRVEELCQRVYSRGDSEPLSEAAQAHTRELGRENRRLQDLATQLQEKHHRISLEYSELQDKVTSAETKVLEMETTVEDLQWDIEKLRKREQKLNKHLAEALEQLNSGYYVSGSSSGFQGGQITLSMQKFEMLNAELEENQELANSRMAELEKLQAELQGAVRTNERLKVALRSLPEEVVRETGEYRMLQAQFSLLYNESLQVKTQLDEARGLLLATKNSHLRHIEHMESDELGLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMRHLISSLQNHNHQLKGDAQRYKRKLREVQAEIGKLRAQASGSAHSTPNLGHPEDSGVSAPAPGKEEGGPGPVSTPDNRKEMAPVPGTTTTTTSVKKEELVPSEEDFQGITPGAQGPSSRGREPEARPKRELREREGPSLGPPPVASALSRADREKAKVEETKRKESELLKGLRAELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKAKAEVDELRSRIRELEERDRRESKKIADEDALRRIRQAEEQIEHLQRKLGATKQEEEALLSEMDVTGQAFEDMQEQNGRLLQQLREKDDANFKLMSERIKANQIHKLLREEKDELGEQVLGLKSQVDAQLLTVQKLEEKERALQGSLGGVEKELTLRSQALELNKRKAVEAAQLAEDLKVQLEHVQTRLREIQPCLAESRAAREKESFNLKRAQDISRLRRKLEKQRKVEVYADADEILQEEIKEYKARLTCPCCNTRKKDAVLTKCFHVFCFECVRGRYEARQRKCPKCNAAFGAHDFHRIYIS
"
misc_feature 3650..3781
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/note="Zinc finger, C3HC4 type (RING finger); Region:
zf-C3HC4_2; pfam13923"
/db_xref="CDD:206094"
misc_feature 3656..3787
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/note="RING-finger (Really Interesting New Gene) domain, a
specialized type of Zn-finger of 40 to 60 residues that
binds two atoms of zinc; defined by the 'cross-brace'
motif C-X2-C-X(9-39)-C-X(1-3)-
H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved
in...; Region: RING; cd00162"
/db_xref="CDD:29102"
misc_feature order(3659..3661,3665..3667,3704..3706,3710..3712,
3719..3721,3728..3730,3764..3766,3773..3775)
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/note="cross-brace motif; other site"
/db_xref="CDD:29102"
variation 866
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="g"
/db_xref="dbSNP:369284201"
variation 895
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="g"
/db_xref="dbSNP:147367477"
variation 907
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:140084956"
variation 925
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:376522975"
exon 953..1120
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/inference="alignment:Splign:1.39.8"
variation 995
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:370365187"
variation 1039
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="g"
/db_xref="dbSNP:200779294"
variation 1041
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:201672722"
variation 1106
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="g"
/db_xref="dbSNP:200908487"
variation 1111
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:373736477"
exon 1121..1262
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/inference="alignment:Splign:1.39.8"
variation 1131
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="g"
/db_xref="dbSNP:143962429"
variation 1141
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:369988056"
variation 1146
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="t"
/db_xref="dbSNP:150696859"
variation 1182
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:199734395"
variation 1186
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="g"
/replace="t"
/db_xref="dbSNP:139969532"
variation 1211
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:149784534"
variation 1249
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:201302145"
exon 1263..1469
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/inference="alignment:Splign:1.39.8"
variation 1276
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:145704561"
variation 1285
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:141178194"
variation 1300
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:368256665"
variation 1309
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="g"
/replace="t"
/db_xref="dbSNP:368184098"
variation 1370
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:372421097"
variation 1400
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:370831334"
variation 1401
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:144298537"
variation 1421
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:370199075"
variation 1431
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:370463722"
variation 1434
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:200779544"
variation 1436
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="g"
/replace="t"
/db_xref="dbSNP:146569480"
variation 1447
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:140350331"
variation 1455
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:150302561"
variation 1462
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:142610348"
exon 1470..1591
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/inference="alignment:Splign:1.39.8"
variation 1494
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:373834012"
variation 1501
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:151018120"
variation 1512
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:186930335"
variation 1525
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:190164026"
variation 1577
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:146029900"
variation 1578
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="g"
/replace="t"
/db_xref="dbSNP:140880093"
exon 1592..1738
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/inference="alignment:Splign:1.39.8"
variation 1601
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:150097902"
variation 1621
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:138667885"
variation 1624
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:141073737"
variation 1678
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:146962748"
variation 1689
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:137974994"
exon 1739..1813
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/inference="alignment:Splign:1.39.8"
variation 1784
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:372843648"
exon 1814..1933
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/inference="alignment:Splign:1.39.8"
variation 1821
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:377699074"
variation 1833
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:368108030"
variation 1848
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:371218349"
variation 1860..1861
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace=""
/replace="c"
/db_xref="dbSNP:368733858"
variation 1861
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:199925281"
variation 1864
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="c"
/db_xref="dbSNP:374715678"
variation 1866
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:200311831"
variation 1894
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:368724386"
variation 1903
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="g"
/db_xref="dbSNP:372294624"
variation 1909
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:376829087"
variation 1913
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:369472935"
exon 1934..2113
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/inference="alignment:Splign:1.39.8"
variation 1940
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:148387316"
variation 1944
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:200109677"
variation 1974
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:201085414"
variation 1975
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:368897397"
variation 1983
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="c"
/db_xref="dbSNP:202224486"
variation 1985
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:201147023"
variation 1991
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:141581063"
variation 2002
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:150892446"
variation 2053
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="g"
/db_xref="dbSNP:139539933"
variation 2057
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:371891868"
variation 2072
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:377042428"
variation 2101
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:369667427"
exon 2114..2249
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/inference="alignment:Splign:1.39.8"
variation 2115
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="g"
/db_xref="dbSNP:201408415"
variation 2119
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:148540364"
variation 2138
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="c"
/db_xref="dbSNP:376887402"
variation 2145
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:146102570"
variation 2172
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:370050962"
variation 2173
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:200241748"
variation 2181
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:373531132"
variation 2208
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:11556801"
exon 2250..2371
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/inference="alignment:Splign:1.39.8"
variation 2344
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:140066306"
variation 2370
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="t"
/db_xref="dbSNP:375382763"
exon 2372..2799
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/inference="alignment:Splign:1.39.8"
variation 2376
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="g"
/replace="t"
/db_xref="dbSNP:371336064"
variation 2379
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:375339639"
variation 2437
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:369888244"
variation 2446
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:149944221"
variation 2450
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:144994266"
variation 2451
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:145317847"
variation 2455
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:201945156"
variation 2468
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:142220777"
variation 2495
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:147842419"
variation 2528
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:373535706"
variation 2570
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="g"
/db_xref="dbSNP:181567820"
variation 2571
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:376394465"
variation 2593
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="g"
/replace="t"
/db_xref="dbSNP:12448366"
variation 2598
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:138041260"
variation 2624
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:370636384"
variation 2639
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="g"
/db_xref="dbSNP:372397361"
variation 2663
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:140772506"
variation 2664
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:7195142"
variation 2676
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:377015847"
variation 2702
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:200704225"
variation 2707
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:368718461"
variation 2708
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:371990879"
variation 2710
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="g"
/replace="t"
/db_xref="dbSNP:376313170"
variation 2719
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="g"
/replace="t"
/db_xref="dbSNP:11556800"
variation 2727
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:372740746"
variation 2756
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:375038841"
variation 2758
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:199751420"
variation 2772
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:369150602"
variation 2787
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:148854241"
exon 2800..2917
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/inference="alignment:Splign:1.39.8"
variation 2821
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="c"
/replace="g"
/db_xref="dbSNP:200021839"
variation 2857
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:138894221"
variation 2901
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:199511804"
variation 2910
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="c"
/db_xref="dbSNP:373318017"
exon 2918..3067
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/inference="alignment:Splign:1.39.8"
variation 2930
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:149396723"
variation 2937
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:368428563"
variation 2943
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:369928310"
variation 2999
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:200484566"
variation 3011
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:146398674"
variation 3028
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:201471588"
exon 3068..3280
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/inference="alignment:Splign:1.39.8"
variation 3070
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:369635997"
variation 3148
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:368729037"
variation 3162
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:76896762"
variation 3199
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="g"
/replace="t"
/db_xref="dbSNP:377035892"
variation 3253
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:369744162"
variation 3254
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="g"
/replace="t"
/db_xref="dbSNP:11556799"
variation 3277
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:201232201"
exon 3281..3406
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/inference="alignment:Splign:1.39.8"
variation 3281
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace=""
/replace="c"
/db_xref="dbSNP:34418731"
variation 3289
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:138471194"
variation 3313
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:4889506"
variation 3343
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:372670313"
variation 3346
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:142343572"
variation 3370
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:201957029"
variation 3386
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:368542250"
exon 3407..3547
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/inference="alignment:Splign:1.39.8"
variation 3465
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="g"
/db_xref="dbSNP:140097440"
exon 3548..3646
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/inference="alignment:Splign:1.39.8"
variation 3601
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:61754473"
variation 3610
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:373316806"
variation 3611
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:201668303"
exon 3647..6016
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/inference="alignment:Splign:1.39.8"
variation 3648
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:370853213"
variation 3658
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:199808715"
variation 3662
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="c"
/db_xref="dbSNP:373895036"
variation 3712
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:375969920"
variation 3731
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:370299929"
variation 3769..3770
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace=""
/replace="g"
/db_xref="dbSNP:35083725"
variation 3778
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:373727066"
variation 3781
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:79828087"
variation 3831
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:367793448"
variation 3834
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:1048622"
variation 3838
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:201807199"
variation 3839
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace=""
/replace="c"
/db_xref="dbSNP:35676536"
variation 3855
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:72793383"
variation 3871
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:369342812"
variation 4062
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="g"
/replace="t"
/db_xref="dbSNP:112016949"
variation 4111
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:147181313"
variation 4203
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="c"
/db_xref="dbSNP:370917350"
variation 4212
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:11642862"
variation 4528
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="t"
/db_xref="dbSNP:189434372"
variation 4573
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace=""
/replace="g"
/db_xref="dbSNP:138074304"
STS 4603..4724
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/standard_name="RH103172"
/db_xref="UniSTS:97505"
variation 4768..4769
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace=""
/replace="ggggggg"
/db_xref="dbSNP:146030134"
variation 4770
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="g"
/replace="t"
/db_xref="dbSNP:201124775"
variation 4774
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="g"
/db_xref="dbSNP:139144017"
variation 4847
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:143079612"
variation 4852
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:371727012"
variation 4915
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:181540872"
variation 4933
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="t"
/db_xref="dbSNP:368844573"
variation 5055
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="g"
/db_xref="dbSNP:185087026"
variation 5098
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:376360885"
variation 5103
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:11640414"
variation 5116
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:374375536"
variation 5185
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="g"
/db_xref="dbSNP:190427175"
variation 5280
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="g"
/db_xref="dbSNP:373487580"
variation 5295
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:376441594"
variation 5315
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:3747486"
variation 5665
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:139244585"
variation 5728
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:201312074"
variation 5828
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:76853104"
variation 5849
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:372130434"
variation 5945
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:150074195"
variation 5946
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:114343697"
polyA_signal 5994..5999
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
variation 5997
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="a"
/replace="g"
/db_xref="dbSNP:181903935"
variation 6014
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
/replace="c"
/replace="t"
/db_xref="dbSNP:144385617"
polyA_site 6016
/gene="RNF40"
/gene_synonym="BRE1B; RBP95; STARING"
ORIGIN
acactcgcacgcgtccgcgcggccgacccatgcactgagctgcgatccttccccgcttcccgccgcagctcggagagatgttcaagctccgactgcaccctcattcccaaaaagtggctggtcttgcggttgagcatctcgccgctcttccgtgccgcgaggcgccccgggctcccgccgcctaggttccaggacagccagcgctcggtcggcggctaccaaggccgggcccgttcgcctcgctccggccaatctacgcgcggagaggcgcggcggggcgaatccgtgggggcgtctccctccgtctcaacggcgacggttgccaagggggcttgtgagggaaggaaggcggaaagcgcaggctcacgccagtgggagcgaagagaacgcgcagatacgtgagaagttgcgagtgcccacctgggcgccctctcttccaggttgctaatacgagggccggtgctgtcctccaggctgggaagtgggagcgcggtgtcagttactatgggaactgcctcttggccaatcaccgagagaaagaggaggtgtttgggaagaagccagaggacccgagtggcgggaccaagcgtaaccaatagaagcagaagataaagaagtttcctcacatccggggctgcctttggcgcctgcgccctgcgcaccgttggggggggggcagtggcgtccagtgacgcccagtgacgtccggtgaaatccaagatggcggcgctaggctgaccctcctgctggtgacggaagtaccgcctcctcccgtctgacgcccctcaggggaccctgcatcgctccagccgccgcggccatgtctgggccaggcaacaaacgcgccgccggcgacgggggctcagggcccccggaaaagaagctgagtcgtgaggagaagaccaccacgactcttatcgagcccattcgtcttggaggcatctcttccacggaggagatggacctgaaggtactacagttcaagaacaagaaactggcagagcggctggaacaacggcaggcttgtgaagatgaactccgagaacgaattgagaagttggagaagcggcaggccacagatgatgccacactcctcatcgtcaatcgctactgggcccagctggatgaaactgtggaagcccttctccgatgccatgagagccagggggagctgtcttcagcgcctgaggcacctgggacccaggaggggccaacatgtgatgggactcctctcccagagccggggacatcagagctgagagaccccttgctgatgcagctgcggccccctctcagtgagccggccttggcttttgtggtggcactgggtgccagcagcagtgaggaggtggagctggagctgcaaggccgaatggagttctccaaggcagctgtgtctcgtgtggtagaggcctcagaccgcctacagcgccgggtggaggaactctgtcagcgagtgtacagccgaggggacagtgagcccctcagtgaggcggctcaggcacacacccgagagctgggccgtgagaaccggcgactgcaggacttggccactcagctgcaggagaaacaccaccgcatctcattggagtactccgagctccaggataaagtgacatcggcagagaccaaggtgctggagatggagacaacagtggaggacttgcagtgggacatcgagaagctgcggaagcgagagcaaaagctcaataagcacctggcagaggccttagagcagcttaactctggctactatgtatctgggagctcctcaggcttccaggggggccagatcacactcagcatgcagaagtttgagatgctgaatgcagagttagaggaaaaccaggaactggccaacagccgtatggcagagctggagaaactgcaggccgaacttcagggggctgtgcggaccaatgagcgcctcaaggtggccctgcggagccttcctgaggaggtagtgcgggagacgggggagtaccgcatgctgcaggcccaattctcactgctctacaacgagtctctgcaagtgaagacccagctagacgaggctcggggcctgctgctggccacaaagaactcccacctgcgacacatcgagcacatggagagcgacgagctggggctgcagaagaagctacgcacagaggtcattcagctggaggacacgctggcccaggtacgcaaggagtatgagatgctgcgcatcgagtttgagcagaatctggcggccaacgagcaggcggggcccatcaaccgtgagatgcgccacctgattagtagtcttcaaaaccacaaccaccagctaaaaggggacgcccagcgatacaagcggaagcttcgagaagtacaagctgagattggcaagctccgggcccaggccagtggctctgcccactccacccccaacctgggccacccagaggattctggcgtcagtgccccagccccagggaaagaggagggtgggccaggccctgtcagtacccccgacaacagaaaggagatggctccagtgcctggcaccaccactactaccacttcagtgaagaaggaggagctggtcccctctgaagaggacttccagggtataacccctggggcccagggcccttcctcccggggccgagaacctgaggccaggcccaagcgggagcttcgggaacgggaaggtcccagcctaggacctccacctgtagcctccgctctctcaagggctgatcgggagaaggccaaggtggaagaaaccaagcggaaggaatcagaactcctcaagggtctccgagcagagctcaagaaggcccaggagagccagaaggagatgaaactgctgctggatatgtacaagtcagcgcccaaggagcagcgggataaggtgcagctcatggcagcggaacgcaaggctaaggccgaggttgatgagctgcggagccgcatccgggaattggaggagagggatcgaagggagagcaagaagatcgcggatgaggatgccctgcggcgcattcggcaggcagaggagcagatagaacacctgcagcgcaagctgggtgccaccaagcaggaggaggaggctctgctctcagagatggatgtgacaggtcaggcttttgaggacatgcaggaacagaacgggcggctgctacagcagttgcgggaaaaggatgatgccaactttaagctaatgtcagagcggatcaaggccaaccagattcacaagctgctgcgggaggagaaggatgagttgggcgagcaggtccttggcctcaagtcccaggtggatgcccagctgctgactgtgcagaagctggaggagaaggagcgagccttgcagggcagcctcgggggtgtggagaaggagctgacgctgcgcagccaagccctggagctcaacaagcggaaggctgtagaagccgcccagctggccgaggacctgaaggtgcagctggagcacgtgcagactcggctgcgggagatccagccctgcctggcagagagccgggctgctcgtgagaaagagagcttcaacctcaagagggctcaggacatctcacggctgcggcgcaagctggaaaagcagaggaaggtggaggtctacgcagatgccgacgaaatcctccaggaggagatcaaggagtacaaggcgcggttgacctgcccctgctgtaacacccgcaagaaggatgcagtccttaccaagtgcttccacgttttctgcttcgagtgcgtgcggggccgctatgaggcccgccagaggaagtgccccaagtgcaacgcggcctttggtgcccacgacttccatcgtatctacatcagctgaacctgaaactcaggggactctggaacaccatggaccctgggggctgtgcccccatctcctccccaccccaggtctagtggccccaccctccattccggaccccatgggcccagcccctgcccatctagttggtttggggaccctggtgcatgctagtgggcatgggatcagccaagcttcgttccatcttttcctaaaggtcagagctgcagcctagggggcactgccctacagaaaaggtctgcctgagaggcctgaggagcccagagcacttgactgagcttcccggaaactggccctaacctgtctgtctccgtggatgcatcctaaccctaaggaaaattccccaggctgtgatctaccctagagaaggctcgctccctgcctactggctcacaaatgaggaccagtgagccatgtccttgttccttgtttgagactgggctgcaggccccaggaagactttccttcacccaccatccccctaacctcggcagggcttctgtcctgtggagttccctggacaccttggtctggctcttgtgccaagggctgaaggaggtaccctcttggcagatgggggcatcacttgcttcctttgggaagctctaaggttgctgcagtcaccttcctcatcttgcaggtgctgaaccaacatcatcagtttctattctaatcaggccccttcccaatctccatttctctgccaagcccatttacccccacctcatgcatcccaaggctctactgggtccctggacctaaccctgctttcatcctggtggccttaactacagtggaggtggaacttcccaggaggggaagggacagaccagccccagccgctgggccaacttccaatcattccagctagaagagcttccccctgacaccctgtgactgagcctgtgtcctgtctgcctgcccagccatgctccatcggctgtgagggcagtgcccggagaggccagagggttggagctgcagggacccgtttggacccacagcctctgttctagagatgcttgtataggctgttaattgtgatgaataaacgttcaaccctcggcctgcagccagagtagccaggccgcgcaccccaaatgtagtcccccgattttagctgcagcagctgagcagcactttgctggcttggtgtgagcctgggagggctcagacttaacggccggcagggatcccggactgggcctgaaggggagagcgtggtggtcgtcgcggagccgcctgtcctgctcccaccgaccccggtctgaccacgtccttggctgtcatggccgggggatgccgggactcctcgggctgcatcctgggaagtgtagttcctggtccgcacatggttaggaggttctcggagagagagctagtttcccggttgcgctggccaaaggccggcctgaactggatcctgcggaccgcttctcagcggcttcacccccacaccactcgaatgcacagatcgggacacctcagctgggtgacttccctcgttgcaatcggcctcgggagcggtgcggcgtgtaccgagcggcgcccctgggctcagcgcgctgcaggcgccccgggcggatccttcaccgaggcaggactggggctggcgccagagccggtgcggagcggtgttggttcaggcgctggcgacagtgctatggccacggcaggggccgcgtgcgtctcagcggtggcgccttcggaccctattggcgcccgggacttaagcggggccgccgctgctggaccaggacgaactggagaaggagacgcgggccgccacggtgacctcgggcgtagggccggcggcggcgggcacgctggtggaagcgcgggccgcggcaggggaggacatcgggccgcagagaaagtgccgatggcctggggcagcggtgcgagggtgggaaaaacgcaggatattgcatcatagagacgcggccaccttcgcccctggagagcgccagtctcaggagcgccgcaccggtcacgggtggaggtcagccaggcctccgtaagcgcggtccccttccaggagtagccttcgcctgggctcttgagtagatgccaagtaattccgcatcgtctctctagatatctgcgctaaaggccacccggtctccttatcagaggggcaaaactctcctcgtgggtcttcatacctaataaaagtcggcatcaaaccacaaa
//
ANNOTATIONS from NCBI Entrez Gene (20130726):
GeneID:9810 -> Molecular function: GO:0004842 [ubiquitin-protein ligase activity] evidence: IDA
GeneID:9810 -> Molecular function: GO:0005515 [protein binding] evidence: IPI
GeneID:9810 -> Molecular function: GO:0008270 [zinc ion binding] evidence: IEA
GeneID:9810 -> Molecular function: GO:0017075 [syntaxin-1 binding] evidence: IEA
GeneID:9810 -> Molecular function: GO:0031625 [ubiquitin protein ligase binding] evidence: IPI
GeneID:9810 -> Molecular function: GO:0032403 [protein complex binding] evidence: IEA
GeneID:9810 -> Molecular function: GO:0042803 [protein homodimerization activity] evidence: IPI
GeneID:9810 -> Biological process: GO:0006511 [ubiquitin-dependent protein catabolic process] evidence: ISS
GeneID:9810 -> Biological process: GO:0010390 [histone monoubiquitination] evidence: IDA
GeneID:9810 -> Biological process: GO:0033523 [histone H2B ubiquitination] evidence: IDA
GeneID:9810 -> Cellular component: GO:0000151 [ubiquitin ligase complex] evidence: IDA
GeneID:9810 -> Cellular component: GO:0005634 [nucleus] evidence: IDA
GeneID:9810 -> Cellular component: GO:0005730 [nucleolus] evidence: IDA
GeneID:9810 -> Cellular component: GO:0005737 [cytoplasm] evidence: IDA
GeneID:9810 -> Cellular component: GO:0005886 [plasma membrane] evidence: IDA
GeneID:9810 -> Cellular component: GO:0033503 [HULC complex] evidence: IDA
GeneID:9810 -> Cellular component: GO:0043005 [neuron projection] evidence: ISS
ANNOTATIONS from NCBI Entrez Gene (20130726):
NP_001193962 -> EC 6.3.2.-
by
@meso_cacase at
DBCLS
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