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2021-04-23 23:38:24, GGRNA : RefSeq release 205 (Mar, 2021)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Rattus norvegicus similar to RIKEN cDNA 9530003J23 (RGD1306474), mRNA. (1265 bp)
tggcctcaaactcagagaaccgtctgcctctgcctccagagtgctggtcttaaaggcttacaccaccatcaccacccagctacctagtgtgattatcatttgatgataagcctagatttttcagcttgtgagtgaaactgaagtggtagagtatttctctaactccttgcttttcaaatgcttctctaacatgccattctccttcaacaaaggaactcaggtttaatcatgaacaatggactcttcctcatacacacacacacacacacacacacacacacacacacacacacacacacacacactcagcttaggcaaaactcacagctatggtggtatctgatcccttcgtctgtttgaactactccaaaaaccttaaagttgtccactgttgggtaaggcaacatttgcaaaggtgacttctaaatgactgaactcaggagacttagctgttgttttcctgtactgacctttggctgcggcgtttgcctgacgtgcttgagaaataaatgtacccctgcttgtgaca
position 840 846 894 906 966 1030 1042 1054 1060 1066 1072 1150 1156 1210 1216 1222
Synonym: Lyzf1
NM_001108746.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/rn/rc_AI639105_at
lang : en | div : | spe : rn | query_string : rc_AI639105_at | format : html | download :

0.000 | 0.000 | search_start;
0.089 | 0.089 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TTGCCTGACGTGCTTGAGAAATAAA)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.099 | 0.009 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TGGCTGCGGCGTTTGCCTGACGTGC)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.112 | 0.014 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TGATAAGCCTAGATTTTTCAGCTTG)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.123 | 0.011 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TGAACAATGGACTCTTCCTCATACA)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.134 | 0.011 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TCTAACTCCTTGCTTTTCAAATGCT)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.143 | 0.009 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TCAGCTTAGGCAAAACTCACAGCTA)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.154 | 0.011 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:GTATCTGATCCCTTCGTCTGTTTGA)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.164 | 0.010 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:GCCTAGATTTTTCAGCTTGTGAGTG)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.172 | 0.008 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:CTTTTCAAATGCTTCTCTAACATGC)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.184 | 0.012 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:CTTCTAAATGACTGAACTCAGGAGA)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.194 | 0.010 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:CGGCGTTTGCCTGACGTGCTTGAGA)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.203 | 0.010 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:ATGGTGGTATCTGATCCCTTCGTCT)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.214 | 0.011 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:AGGTGACTTCTAAATGACTGAACTC)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.250 | 0.036 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:ACAGCTATGGTGGTATCTGATCCCT)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.260 | 0.009 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:ACACACACACACTCAGCTTAGGCAA)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.268 | 0.008 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:AAACTCACAGCTATGGTGGTATCTG)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.291 | 0.023 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TTGCCTGACGTGCTTGAGAAATAAA)%26(nt:TGGCTGCGGCGTTTGCCTGACGTGC)%26(nt:TGATAAGCCTAGATTTTTCAGCTTG)%26(nt:TGAACAATGGACTCTTCCTCATACA)%26(nt:TCTAACTCCTTGCTTTTCAAATGCT)%26(nt:TCAGCTTAGGCAAAACTCACAGCTA)%26(nt:GTATCTGATCCCTTCGTCTGTTTGA)%26(nt:GCCTAGATTTTTCAGCTTGTGAGTG)%26(nt:CTTTTCAAATGCTTCTCTAACATGC)%26(nt:CTTCTAAATGACTGAACTCAGGAGA)%26(nt:CGGCGTTTGCCTGACGTGCTTGAGA)%26(nt:ATGGTGGTATCTGATCCCTTCGTCT)%26(nt:AGGTGACTTCTAAATGACTGAACTC)%26(nt:ACAGCTATGGTGGTATCTGATCCCT)%26(nt:ACACACACACACTCAGCTTAGGCAA)%26(nt:AAACTCACAGCTATGGTGGTATCTG)?source=Rattus norvegicus (Norway rat)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.292 | 0.001 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]