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Previous release (v1)
2024-04-29 11:28:58, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_039079851 12122 bp mRNA linear ROD 11-JUN-2023
DEFINITION PREDICTED: Rattus norvegicus plectin (Plec), transcript variant
X22, mRNA.
ACCESSION XM_039079851
VERSION XM_039079851.1
DBLINK BioProject: PRJNA677964
KEYWORDS RefSeq.
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_051342.1) annotated using gene prediction method: Gnomon,
supported by mRNA and EST evidence.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Updated annotation
Annotation Name :: GCF_015227675.2-RS_2023_06
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.1
Annotation Method :: Best-placed RefSeq; Gnomon;
cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 06/06/2023
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..12122
/organism="Rattus norvegicus"
/mol_type="mRNA"
/strain="BN/NHsdMcwi"
/db_xref="taxon:10116"
/chromosome="7"
/sex="male"
/tissue_type="kidney"
/country="USA: Wisconsin, Milwaukee, Medical College of
Wisconsin"
/collection_date="2019-03-08"
/collected_by="Rebecca Schilling"
gene 1..12122
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="plectin; Derived by automated computational
analysis using gene prediction method: Gnomon. Supporting
evidence includes similarity to: 2 mRNAs, 58 ESTs, 42 long
SRA reads, 8 Proteins, and 100% coverage of the annotated
genomic feature by RNAseq alignments, including 9 samples
with support for all annotated introns"
/db_xref="GeneID:64204"
/db_xref="RGD:621649"
CDS 224..10957
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/codon_start=1
/product="plectin isoform X20"
/protein_id="XP_038935779.1"
/db_xref="GeneID:64204"
/db_xref="RGD:621649"
/translation="
MVAGMLMPLDQLRAIYEVLFREGVMVAKKDRRPRSLHPHVPGVTNLQVMRAMTSLKARGLVRETFAWCHFYWYLTNEGIDHLRQYLHLPPEIVPASLQRVRRPVAMVMPARRRSPHVQTMQGPLGCPPKRGPLPAEDPAREERQVYRRKEREEGAPETPVVSATIVGTLARPGPEPTPATDERDRVQKKTFTKWVNKHLIKHWRAEAQRHISDLYEDLRDGHNLISLLEVLSGDSLPRERDVIRSVRLPREKGRMRFHKLQNVQIALDYLRHRQVKLVNIRNDDIADGNPKLTLGLIWTIILHFQISDIQVSGQSEDMTAKEKLLLWSQRMVEGYQGLRCDNFTTSWRDGRLFNAIIHRHKPMLIDMNKVYRQTNLENLDQAFSVAERDLGVTRLLDPEDVDVPQPDEKSIITYVSSLYDAMPRVPGAQDGVRANELQLRWQEYRELVLLLLQWIRHHTAAFEERKFPSSFEEIEILWCQFLKFKETELPAKEADKNRSKGIYQSLEGAVQAGQLKIPPGYHPLDVEKEWGKLHVAILEREKQLRSEFERLECLQRIVSKLQMEAGLCEEQLNQADSLLQSDIRLLASGKAAQRAGEVERDLDKADGMIRLLFNDVQTLKDGRHPQGEQMYRRVYRLHERLVAIRTEYNLRLKAGVGAPVTQVTLQSTQRRPELEDSTLRYLHDLLAWVEENQRRIDGAEWGVDLPSVEAQLGSHRGMHQSIEEFRAKIERARNDESQLSPATRGAYRDCLGRLDLQYAKLLNSSKARLRSLESLHGFVAAATKELMWLNEKEEEEVGFDWSDRNTNMAAKKESYSALMRELEMKEKKIKEIQNTGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKENTAYFQFFSDVREAEEQLQKLQETLRRKYSCDRSITVTRLEDLLQDAQDEKEQLNEYKGHLSGLAKRAKAIVQLKPRNPAHPVRGHVPLLAVCDYKQVEVTVHKGDQCQLVGPAQPFHWKVLGGSSSEAAVPSVCFLVPPPNQEAQEAVARLEAQHQALVTLWHQLHVDMKSLLAWQSLNRDIQLIRSWSLVTFRTLKPEEQRQALRNLELHYQAFLRDSQDAGGFGPEDRLVAEREYGSCSRHYQQLLQSLEQGEQEESRCQRCISELKDIRLQLEACETRTVHRLRLPLDKDPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLALPEPSPAAPTLRSELELTLGKLEQVRSLSAIYLEKLKTISLVIRSTQGAEEVLKTHEEHLKEAQAVPATLQELEVTKASLKKLRAQAEAQQPVFNTLRDELRGAQEVGERLQQRHGERDVEVERWRERVTQLLERWQAVLAQTDVRQRELEQLGRQLRYYRESADPLSSWLQDAKSRQEQIQAVPIANSQAAREQLRQEKALLEEIERHGEKVEECQKFAKQYINAIKDYELQLITYKAQLEPVASPAKKPKVQSGSESVIQEYVDLRTRYSELTTLTSQYIKFISETLRRMEEEEMQTVQQEQILQETQALQKSFLSEKDSLLQRERFIEQEKAKLEQLFQDEVAKAKQLQEEQQRQQQQMEQEKQELVASMEEARRRQREAEEGVRRKQEELQRLEQQRQQQEKLLAEENQRLRERLQRLEEEHRAALAHSEEIATSQAAATKALPNGRDALDGPSMEAEPEYTFEGLRQKVPAQQLQEAGILSMEELQRLTQGHTTVAELTQREDVHRYLKGGSSIAGLLLKPTNEKLSVYTALQRQLLSPGTALILLEAQAASGFLLDPVRNRRLTVNEAVKEGVVGPELHHKLLSAERAVTGYKDPYTGEQISLFQAMKKDLIVRDHGIRLLEAQIATGGIIDPVHSHRVPVDVAYQRGYFDEEMNRVLADPSDDTKGFFDPNTHENLTYLQLLERCVEDPETGLRLLPLTDKAAKGGELVYTDTEARDVFEKATVSAPFGKFQGKTVTIWEIINSEYFTAEQRRDLLRQFRTGRITVEKIIKIVITVVEEHERKGQLCFEGLRALVPAAELLDSGVISHEVYQQLQRGERSVREVAEADEVRQALRGTSVIAGVWLEEAGQKLSIYEALRRDLLQPEVAVALLEAQAGTGHIIDPATSARLTVDEAVRAGLVGPEMHEKLLSAEKAVTGYRDPYSGQSVSLFQALKKGLIPREQGLRLLDAQLSTGGIVDPSKSHRVPLDVAYARGYLDKETNRALTSPRDDARVYLDPSTREPVTYSQLQQRCRSDQLTGLSLLPLSEKAVRARQEEVYSELQARETLEKAKVEVPVGGFKGRALTVWELISSEYFTEEQRQELLRQFRTGKVTVEKVIKILITIVEEVETQRQERLSFSGLRAPVPASELLASKILSRTQFEQLKDGKTSVKDLSEVGSVRTLLQGSGCLAGIYLEDSKEKVTIYEAMRRGLLRPSTATLLLEAQAATGFLVDPVRNQRLYVHEAVKAGVVGPELHEKLLSAEKAVTGYKDPYSGSTISLFQAMKKGLVLRDHAIRLLEAQIATGGIIDPVHSHRLPVDVAYQRGYFDEEMNRVLADPSDDTKGFFDPNTHENLTYLQLLERCVEDPETGLRLLPLRGAEKTEVVETTQVYTEEETRRAFEETQIDIPGGGSHGGSSMSLWEVMQSDMIPEDQRARLMADFQAGRVTKERMIIIIIEIIEKTEIIRQQNLASYDYVRRRLTAEDLYEARIISLETYNLFREGTKSLREVLEMESAWRYLYGTGSVAGVYLPGSRQTLTIYQALKKGLLSAEVARLLLEAQAATGFLLDPVKGERLTVDEAVRKGLVGPELHDRLLSAERAVTGYRDPYTEQPISLFQAMKKELIPAEEALRLLDAQLATGGIVDPRLGFHLPLEVAYQRGYLNKDTHDQLSEPSEVRSYVDPSTDERLSYTQLLKRCRRDDNSGQMLLPLSDARKLTFRGLRKQITVEELVRSQVMDEATALQLQEGLTSIEEVTKNLQKFLEGTSCIAGVFVDATKERLSVYQAMKKGIIRPGTAFELLEAQAATGYVIDPIKGLKLTVEEAVRMGIVGPEFKDKLLSAERAVTGYKDPYSGKLISLFQAMKKGLILKDHGIRLLEAQIATGGIIDPEESHRLPVEVAYKRGLFDEEMNEILTDPSDDTKGFFDPNTEENLTYLQLMERCITDPQTGLCLLPLKEKKRERKTSSKSSVRKRRVVIVDPETGKEMSVYEAYRKGLIDHQTYLELSEQECEWEEITISSSDGVVKSMIIDRRSGRQYDIDDAITKNLIDRSALDQYRAGTLSITEFADMLSGNAGGFRSRSSSVGSSSSYPISSAVPRTQLASWSDPTEETGPVAGILDTETLEKVSITEAMHRNLVDNITGQRLLEAQACTGGIIDPSTGERFPVTEAVNKGLVDKIMVDRINLAQKAFCGFEDPRTKTKMSAAQALKKGWLYYEAGQRFLEVQYLTGGLIEPDTPGRVSLDEALQRGTVDARTAQKLRDVSAYSKYLTCPKTKLKISYKDALDRSMVEEGTGLRLLEAAAQSSKGYYSPYSVSGSGSTAGSRTGSRTGSRAGSRRGSFDATGSGFSMTFSSSSYSSSGYGRRYASGPSASLGGPESAVA"
misc_feature 242..520
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin/S10 domain; Region: S10_plectin; pfam03501"
/db_xref="CDD:427337"
misc_feature 773..1138
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="first calponin homology (CH) domain found in the
plectin/dystonin/MACF1 family; Region: CH_PLEC-like_rpt1;
cd21188"
/db_xref="CDD:409037"
misc_feature order(782..784,794..796,995..997,1001..1006,1013..1018,
1022..1024,1049..1075,1088..1090,1094..1099,1103..1108,
1115..1120,1127..1129)
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="putative actin binding site [polypeptide binding];
other site"
/db_xref="CDD:409037"
misc_feature 1175..1492
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="second calponin homology (CH) domain found in
plectin and similar proteins; Region: CH_PLEC_rpt2;
cd21238"
/db_xref="CDD:409087"
misc_feature order(1181..1183,1193..1195,1343..1345,1349..1354,
1361..1366,1370..1372,1397..1423,1442..1444,1448..1453,
1457..1462,1469..1474,1481..1483)
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="putative actin binding site [polypeptide binding];
other site"
/db_xref="CDD:409087"
misc_feature order(1265..1267,1274..1276,1334..1345,1349..1354)
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="polypeptide substrate binding site [polypeptide
binding]; other site"
/db_xref="CDD:409087"
misc_feature 1991..>3016
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="chromosome segregation protein SMC, primarily
archaeal type; Region: SMC_prok_A; TIGR02169"
/db_xref="CDD:274009"
misc_feature 2546..3082
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Spectrin repeats, found in several proteins
involved in cytoskeletal structure; family members include
spectrin, alpha-actinin and dystrophin; the spectrin
repeat forms a three helix bundle with the second helix
interrupted by proline in some sequences; Region: SPEC;
cd00176"
/db_xref="CDD:238103"
misc_feature 2855..2872
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="linker region [active]"
/db_xref="CDD:238103"
misc_feature 3071..3271
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="SH3 domain; Region: SH3_10; pfam17902"
/db_xref="CDD:407754"
misc_feature 3374..3607
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Spectrin like domain; Region: Spectrin_like;
pfam18373"
/db_xref="CDD:436447"
misc_feature <3770..>4918
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="DNA repair exonuclease SbcCD ATPase subunit
[Replication, recombination and repair]; Region: SbcC;
COG0419"
/db_xref="CDD:223496"
misc_feature 3998..4570
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Spectrin repeats, found in several proteins
involved in cytoskeletal structure; family members include
spectrin, alpha-actinin and dystrophin; the spectrin
repeat forms a three helix bundle with the second helix
interrupted by proline in some sequences; Region: SPEC;
cd00176"
/db_xref="CDD:238103"
misc_feature 4307..4324
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="linker region [active]"
/db_xref="CDD:238103"
misc_feature 5384..5500
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: Plectin; pfam00681"
/db_xref="CDD:425816"
misc_feature 5498..5614
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: Plectin; pfam00681"
/db_xref="CDD:425816"
misc_feature 5609..5719
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: PLEC; smart00250"
/db_xref="CDD:197605"
misc_feature 5726..5842
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: Plectin; pfam00681"
/db_xref="CDD:425816"
misc_feature 6362..6475
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: PLEC; smart00250"
/db_xref="CDD:197605"
misc_feature 6482..6598
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: Plectin; pfam00681"
/db_xref="CDD:425816"
misc_feature 6593..6703
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: PLEC; smart00250"
/db_xref="CDD:197605"
misc_feature 6710..6826
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: Plectin; pfam00681"
/db_xref="CDD:425816"
misc_feature 7361..7477
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: Plectin; pfam00681"
/db_xref="CDD:425816"
misc_feature 7475..7591
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: Plectin; pfam00681"
/db_xref="CDD:425816"
misc_feature 7586..7681
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: PLEC; smart00250"
/db_xref="CDD:197605"
misc_feature 7703..7819
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: Plectin; pfam00681"
/db_xref="CDD:425816"
misc_feature 8363..8473
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: PLEC; smart00250"
/db_xref="CDD:197605"
misc_feature 8480..8596
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: Plectin; pfam00681"
/db_xref="CDD:425816"
misc_feature 8591..8701
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: PLEC; smart00250"
/db_xref="CDD:197605"
misc_feature 8708..8824
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: Plectin; pfam00681"
/db_xref="CDD:425816"
misc_feature 9089..9202
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: PLEC; smart00250"
/db_xref="CDD:197605"
misc_feature 9209..9325
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: Plectin; pfam00681"
/db_xref="CDD:425816"
misc_feature 9320..9415
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: PLEC; smart00250"
/db_xref="CDD:197605"
misc_feature 9437..9553
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: Plectin; pfam00681"
/db_xref="CDD:425816"
misc_feature <9740..9826
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: Plectin; pfam00681"
/db_xref="CDD:425816"
misc_feature 10136..10237
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: PLEC; smart00250"
/db_xref="CDD:197605"
misc_feature 10244..10360
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: Plectin; pfam00681"
/db_xref="CDD:425816"
misc_feature 10472..10588
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: Plectin; pfam00681"
/db_xref="CDD:425816"
misc_feature 10580..10693
/gene="Plec"
/gene_synonym="Pcn; Plec1; Pltn"
/note="Plectin repeat; Region: PLEC; smart00250"
/db_xref="CDD:197605"
ORIGIN
tcagacaggcagccttgccggcgcaggaattcacggagcaaggctctggagccacactgcccccgagcttgcgcccttgtgcccttgtgcttagaacccgagcctgcctgcctacttgccagtggcccctgccgcatcctgtgccaaaggagcctcatcagcctcctggctgtgccccacctgctgtcctcacccggtgctgaccggcaggcttccagcagccatggtggctggcatgctcatgccactggaccagcttcgggccatctatgaggtgctctttcgtgagggggtgatggttgccaagaaggaccggcgaccccgaagcctgcatccccatgtgcccggcgtcaccaatctacaggtcatgcgtgccatgacctcgctgaaagctcggggcctggtgcgggagacctttgcctggtgccacttctactggtacctgaccaacgagggcatcgaccacctacgccagtacctacacctgccaccggagatcgtacctgcctctctgcagcgtgtgcgccgccctgttgccatggtgatgcctgcacgtcgtcgctccccccatgtgcagaccatgcaaggtcccttaggctgtccaccaaagaggggccctctgccagctgaggaccctgcccgggaggagcggcaggtctatcgcaggaaggagcgtgaggaaggggcacctgaaacccctgtggtgtctgccaccatcgtggggaccctggccaggccaggcccagagcccaccccagccacagatgaacgagaccgtgtgcagaagaaaactttcaccaagtgggtcaataaacaccttatcaagcactggagggcagaggctcaaaggcacatcagtgacctgtatgaagacctccgtgatggccacaacctcatctccctgctggaagtcctctcaggagacagcctgccgagggagcgggacgtaatcaggagtgtacgcctgccccgagagaaggggaggatgcgtttccacaagctgcaaaacgttcagattgccctggactatctccgacatcggcaggtgaagttggtgaacatcagaaatgatgacatcgccgatggcaaccccaagctgaccctgggcctgatctggacaatcatcctgcacttccagatctcagacattcaggtgagcggccagtccgaggacatgacagccaaggagaagctgctgctgtggtctcagcgtatggtagagggctaccaaggcctgcgctgtgacaacttcaccaccagctggcgcgacggccggctcttcaatgctatcatccacaggcacaagcccatgctcatagacatgaataaagtgtaccgacagaccaacctggagaacctagaccaggccttctccgtggcagagcgggacctgggagttaccaggctcctggacccagaagatgtggatgtccctcagcctgatgagaagtccatcatcacctacgtttcatccctgtatgatgccatgccccgtgtgccgggcgcacaggatggagtgagggccaatgagctgcagcttcgttggcaagagtaccgggagcttgtgctgctgctgctacagtggatccggcaccacaccgctgcttttgaggagcgcaagttcccctccagctttgaggagattgagatcctatggtgccagtttctgaagttcaaggagacagaacttcctgccaaggaggcagacaagaaccggtccaaaggcatctaccagtctttggagggagcagtacaagcaggccagctcaagattccccctggctaccacccgctagacgtggaaaaggagtggggcaagctgcacgtggccatcctggagcgggagaagcaactccggagcgagtttgagaggctggagtgtcttcagcgcattgtgagcaagctacagatggaggctgggctatgtgaggagcagctgaaccaggccgattccctactgcagtcggatattcggctgctggcctcaggcaaggcggcacagcgggctggggaagtggagagagacctggacaaggctgatggtatgatccggctgttgttcaatgatgtgcagacccttaaagatgggcggcatccacagggtgaacagatgtaccggagggtgtatcgtctgcatgagcgcctggtagccatccgcactgaatacaacctccggctgaaggcaggggtgggtgcccctgtgacccaggtgaccctgcagagcacacagaggcgcccagagctagaggactccacactgcgttacctgcacgacctgctggcatgggtggaggagaaccagcgtcgaatagacggtgctgagtggggcgtggacttgcccagtgtagaggcacagctgggcagccaccgaggcatgcatcagtctattgaggaattccgggccaagatcgagcgggctcggaatgatgagagccagctctcccctgccacccgaggtgcctaccgagactgcctgggccgcctggacctgcagtatgcaaagctgctgaactcctccaaggcccgcctccggtccctggagagcttgcatgggtttgtggcggcagctaccaaggagctgatgtggctgaatgagaaggaagaggaagaagtgggctttgattggagtgaccgcaacaccaacatggctgccaagaaagaaagttactcggccctgatgcgtgagctggagatgaaggaaaagaaaattaaggagatccagaacacgggggacaggttgctgcgggaagaccatcctgcccggcccacagtggagtccttccaggctgccctgcagacacagtggagctggatgctgcagctgtgttgctgcattgaagcgcacttgaaagagaacacagcctacttccagttcttctcagatgttcgggaggctgaggaacagttgcagaaactacaggagacgttacgcaggaagtacagctgtgaccgctccatcactgtcacaaggcttgaggacctgctgcaggatgcccaggatgagaaggagcaactgaatgagtacaaagggcacctctcaggcctggccaagcgggccaaggctattgtgcagctgaagccacgcaaccctgcccaccctgtgcggggtcacgtgcccctgctagctgtgtgtgactacaagcaggtggaggtgactgtgcacaagggtgaccaatgccagctggtgggccctgcccagccgttccactggaaggtgctcggtggttccagcagtgaggctgccgtgccttctgtgtgctttcttgtgccgccacccaaccaggaggcccaggaagctgttgctaggctggaggcccagcatcaggccctggttactctgtggcaccagcttcacgtggacatgaagagtcttctggcatggcagagcctcaatcgtgacatacagctcatccggtcctggtccctagtcacgttccgcacgctgaagcccgaggagcagcggcaagctctgcgcaacctggagttgcactaccaggccttccttcgagacagccaggacgctggtggctttgggcccgaggaccggctggtggcagagcgcgaatatggatcttgtagtcgccactaccagcagctgctacaaagcctggagcagggtgagcaggaggagtctcgctgtcagcgatgcatctcggagctcaaggacattcggctgcaactggaggcctgtgagactcggactgtgcaccgtctgcggctgccactggataaagaccccgcacgggagtgtgcccagcgcatcgctgagcaacagaaagcacaggctgaggtggaggggctgggcaagggagttgcccggctgtctgctgaggctgagaaagttctggccttgccagagccgtcacctgctgcaccaactctgcgctcggagttggaattgaccctgggcaagctggaacaggtcagaagcctgtctgccatctacttggagaaactcaagaccatcagcttggtaattcgcagtacccagggggctgaggaggtgcttaaaacacacgaggagcacctgaaggaggcccaggccgtgcctgccacactccaagagctcgaagtcaccaaggcttcactaaagaagctgcgggcccaggcggaggcacagcagcctgtattcaacaccctacgagatgagctgaggggggcacaggaagttggtgaacggctacagcagcggcatggtgagcgggacgtggaagtagagcgctggcgagaacgtgtcactcagttgctggagcgctggcaggctgtgctagcccagactgatgtgcggcagcgggagcttgaacagctgggccgccaacttcgctactaccgtgaaagtgcggatccgctgagctcctggctgcaggatgccaagagccggcaagagcagatccaggctgtgccaatagccaacagtcaggctgcacgagaacagctgcgccaggagaaggccctgctggaggagattgagcgccatggtgagaaggttgaggagtgccagaagtttgctaagcagtacatcaatgcaatcaaggactatgagctccagctgatcacctacaaggctcagcttgaacctgtggcctcccccgccaagaagcccaaggttcagtctggatcggagagcgtcatccaggagtacgtggatctgcgtacacgctacagtgagctgaccacactcacgagtcagtacatcaagttcatcagtgagacactgcgccgcatggaagaggaagagatgcagactgtgcagcaggagcagatactgcaggagacacaggccctgcagaagagctttctctctgagaaggacagcttgctgcaacgcgaacgcttcatcgagcaggagaaggccaagctggagcagcttttccaggacgaggtggcaaaagcaaaacagctgcaggaggagcagcagcggcagcagcagcagatggagcaggaaaagcaggagctggtggccagcatggaggaggcccggaggcggcagcgtgaggcag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//
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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