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2024-03-28 22:13:55, GGRNA : RefSeq release 222 (Jan, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Rattus norvegicus enolase 1 (Eno1), transcript variant 1, mRNA. (1754 bp)
gatcaagactggtgccccctgccgatctgagcgcctggccaagtacaatcagatccttagaatcgaggaggagctgggcagcaaagccaagtttgccggcaggtccttcaggaaccccctggccaagtaaggcatggaccggagatccctggagctaccagatcctctgtctctgtcatccaggcggctcaaggctggcccagtgcttgcccctcccatgtcactgcttccttagatgtccaccccgaccacctggagccctgctggagcccccagctttgtaatcatgtgatcagtctgaatcattgtttctgtcacctgactttccagctagtgtctggagccctctgaactccagcgtaatctctagggtgcccacaccatcaagactccccccagtggtttacttgcaaaaataaaagctgcagaagcccaaaaaaaaaaaaaaaaaaaaaaaa
position 1585
Synonym: Nne
NM_012554.3 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
Rattus norvegicus enolase 1 (Eno1), transcript variant 2, mRNA. (1803 bp)
gatcaagactggtgccccctgccgatctgagcgcctggccaagtacaatcagatccttagaatcgaggaggagctgggcagcaaagccaagtttgccggcaggtccttcaggaaccccctggccaagtaaggcatggaccggagatccctggagctaccagatcctctgtctctgtcatccaggcggctcaaggctggcccagtgcttgcccctcccatgtcactgcttccttagatgtccaccccgaccacctggagccctgctggagcccccagctttgtaatcatgtgatcagtctgaatcattgtttctgtcacctgactttccagctagtgtctggagccctctgaactccagcgtaatctctagggtgcccacaccatcaagactccccccagtggtttacttgcaaaaataaaagctgcagaagcccaaaaaaaaaaaaaaaaaaaaaaaa
position 1634
Synonym: Nne
NM_001109908.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus enolase 1 (Eno1), transcript variant X1, mRNA. (1639 bp)
gatcaagactggtgccccctgccgatctgagcgcctggccaagtacaatcagatccttagaatcgaggaggagctgggcagcaaagccaagtttgccggcaggtccttcaggaaccccctggccaagtaaggcatggaccggagatccctggagctaccagatcctctgtctctgtcatccaggcggctcaaggctggcccagtgcttgcccctcccatgtcactgcttccttagatgtccaccccgaccacctggagccctgctggagcccccagctttgtaatcatgtgatcagtctgaatcattgtttctgtcacctgactttccagctagtgtctggagccctctgaactccagcgtaatctctagggtgcccacaccatcaagactccccccagtggtttacttgcaaaaataaaagctgcagaagccca
position 1493
Synonym: Nne
XM_039109257.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus enolase 1 (Eno1), transcript variant X2, mRNA. (1666 bp)
gatcaagactggtgccccctgccgatctgagcgcctggccaagtacaatcagatccttagaatcgaggaggagctgggcagcaaagccaagtttgccggcaggtccttcaggaaccccctggccaagtaaggcatggaccggagatccctggagctaccagatcctctgtctctgtcatccaggcggctcaaggctggcccagtgcttgcccctcccatgtcactgcttccttagatgtccaccccgaccacctggagccctgctggagcccccagctttgtaatcatgtgatcagtctgaatcattgtttctgtcacctgactttccagctagtgtctggagccctctgaactccagcgtaatctctagggtgcccacaccatcaagactccccccagtggtttacttgcaaaaataaaagctgcagaagccca
position 1520
Synonym: Nne
XM_039109258.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
PREDICTED: Rattus norvegicus enolase 1 (Eno1), transcript variant X3, mRNA. (1777 bp)
gatcaagactggtgccccctgccgatctgagcgcctggccaagtacaatcagatccttagaatcgaggaggagctgggcagcaaagccaagtttgccggcaggtccttcaggaaccccctggccaagtaaggcatggaccggagatccctggagctaccagatcctctgtctctgtcatccaggcggctcaaggctggcccagtgcttgcccctcccatgtcactgcttccttagatgtccaccccgaccacctggagccctgctggagcccccagctttgtaatcatgtgatcagtctgaatcattgtttctgtcacctgactttccagctagtgtctggagccctctgaactccagcgtaatctctagggtgcccacaccatcaagactccccccagtggtttacttgcaaaaataaaagctgcagaagccca
position 1631
Synonym: Nne
XM_006239444.3 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : http://ggrna.dbcls.jp/rn/seq%3aGTGATCAGTCTGAATCATTGTTTCT
lang : en | div : | spe : rn | query_string : seq:GTGATCAGTCTGAATCATTGTTTCT | format : html | download :

0.000 | 0.000 | search_start;
0.089 | 0.089 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:GTGATCAGTCTGAATCATTGTTTCT)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.104 | 0.014 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:GTGATCAGTCTGAATCATTGTTTCT)?source=Rattus norvegicus (Norway rat)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.104 | 0.001 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]