ver.2
Home
|
Help
|
Advanced search
Previous release (v1)
2026-10-05 17:46:28, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS NM_001427256 6382 bp mRNA linear ROD 03-APR-2024
DEFINITION Rattus norvegicus collagen type IV alpha 2 chain (Col4a2), mRNA.
ACCESSION NM_001427256 XM_039095257
VERSION NM_001427256.1
KEYWORDS RefSeq; RefSeq Select.
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 6382)
AUTHORS Sugiyama,A., Kaisho,M., Okada,M., Otani,K. and Yamawaki,H.
TITLE Decreased Expression of Canstatin in Rat Model of
Monocrotaline-Induced Pulmonary Arterial Hypertension: Protective
Effect of Canstatin on Right Ventricular Remodeling
JOURNAL Int J Mol Sci 21 (18), 6797 (2020)
PUBMED 32947968
REMARK GeneRIF: Decreased Expression of Canstatin in Rat Model of
Monocrotaline-Induced Pulmonary Arterial Hypertension: Protective
Effect of Canstatin on Right Ventricular Remodeling.
Publication Status: Online-Only
REFERENCE 2 (bases 1 to 6382)
AUTHORS Wen,Y., Yang,H., Wu,J., Wang,A., Chen,X., Hu,S., Zhang,Y., Bai,D.
and Jin,Z.
TITLE COL4A2 in the tissue-specific extracellular matrix plays important
role on osteogenic differentiation of periodontal ligament stem
cells
JOURNAL Theranostics 9 (15), 4265-4286 (2019)
PUBMED 31285761
REMARK GeneRIF: Wnt/beta-catenin pathway was found to play an important
role in the negative regulation of osteogenesis through COL4A2.
Publication Status: Online-Only
REFERENCE 3 (bases 1 to 6382)
AUTHORS Kanazawa,Y., Ikegami,K., Sujino,M., Koinuma,S., Nagano,M., Oi,Y.,
Onishi,T., Sugiyo,S., Takeda,I., Kaji,H. and Shigeyoshi,Y.
TITLE Effects of aging on basement membrane of the soleus muscle during
recovery following disuse atrophy in rats
JOURNAL Exp Gerontol 98, 153-161 (2017)
PUBMED 28803135
REFERENCE 4 (bases 1 to 6382)
AUTHORS Rannikmae,K., Sivakumaran,V., Millar,H., Malik,R., Anderson,C.D.,
Chong,M., Dave,T., Falcone,G.J., Fernandez-Cadenas,I.,
Jimenez-Conde,J., Lindgren,A., Montaner,J., O'Donnell,M., Pare,G.,
Radmanesh,F., Rost,N.S., Slowik,A., Soderholm,M., Traylor,M.,
Pulit,S.L., Seshadri,S., Worrall,B.B., Woo,D., Markus,H.S.,
Mitchell,B.D., Dichgans,M., Rosand,J. and Sudlow,C.L.M.
CONSRTM Stroke Genetics Network (SiGN), METASTROKE Collaboration, and
International Stroke Genetics Consortium (ISGC)
TITLE COL4A2 is associated with lacunar ischemic stroke and deep ICH:
Meta-analyses among 21,500 cases and 40,600 controls
JOURNAL Neurology 89 (17), 1829-1839 (2017)
PUBMED 28954878
REFERENCE 5 (bases 1 to 6382)
AUTHORS Hixson,J.E., Jun,G., Shimmin,L.C., Wang,Y., Yu,G., Mao,C.,
Warren,A.S., Howard,T.D., Heide,R.S.V., Van Eyk,J., Wang,Y. and
Herrington,D.M.
TITLE Whole Exome Sequencing to Identify Genetic Variants Associated with
Raised Atherosclerotic Lesions in Young Persons
JOURNAL Sci Rep 7 (1), 4091 (2017)
PUBMED 28642624
REMARK Publication Status: Online-Only
REFERENCE 6 (bases 1 to 6382)
AUTHORS Shindo,T., Manabe,I., Fukushima,Y., Tobe,K., Aizawa,K.,
Miyamoto,S., Kawai-Kowase,K., Moriyama,N., Imai,Y., Kawakami,H.,
Nishimatsu,H., Ishikawa,T., Suzuki,T., Morita,H., Maemura,K.,
Sata,M., Hirata,Y., Komukai,M., Kagechika,H., Kadowaki,T.,
Kurabayashi,M. and Nagai,R.
TITLE Kruppel-like zinc-finger transcription factor KLF5/BTEB2 is a
target for angiotensin II signaling and an essential regulator of
cardiovascular remodeling
JOURNAL Nat Med 8 (8), 856-863 (2002)
PUBMED 12101409
REFERENCE 7 (bases 1 to 6382)
AUTHORS Nagai,N., Nakano,K., Sado,Y., Naito,I., Gunduz,M., Tsujigiwa,H.,
Nagatsuka,H., Ninomiya,Y. and Siar,C.H.
TITLE Localization of type IV collagen a 1 to a 6 chains in basement
membrane during mouse molar germ development
JOURNAL Int J Dev Biol 45 (7), 827-831 (2001)
PUBMED 11732842
REFERENCE 8 (bases 1 to 6382)
AUTHORS Bhatt,R.S., Tomoda,T., Fang,Y. and Hatten,M.E.
TITLE Discoidin domain receptor 1 functions in axon extension of
cerebellar granule neurons
JOURNAL Genes Dev 14 (17), 2216-2228 (2000)
PUBMED 10970885
REFERENCE 9 (bases 1 to 6382)
AUTHORS Kamphaus,G.D., Colorado,P.C., Panka,D.J., Hopfer,H.,
Ramchandran,R., Torre,A., Maeshima,Y., Mier,J.W., Sukhatme,V.P. and
Kalluri,R.
TITLE Canstatin, a novel matrix-derived inhibitor of angiogenesis and
tumor growth
JOURNAL J Biol Chem 275 (2), 1209-1215 (2000)
PUBMED 10625665
REFERENCE 10 (bases 1 to 6382)
AUTHORS Grande,J.P., Melder,D.C., Kluge,D.L. and Wieben,E.D.
TITLE Structure of the rat collagen IV promoter
JOURNAL Biochim Biophys Acta 1309 (1-2), 85-88 (1996)
PUBMED 8950183
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
JAXUCZ010000016.1.
On Jan 17, 2024 this sequence version replaced XM_039095257.1.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##Evidence-Data-START##
Transcript exon combination :: SRR26643429.51306.1,
SRR26643299.59668.1 [ECO:0000332]
RNAseq introns :: single sample supports all introns
SAMN16676787, SAMN16676788
[ECO:0000348]
##Evidence-Data-END##
##RefSeq-Attributes-START##
RefSeq Select criteria :: based on single protein-coding transcript
##RefSeq-Attributes-END##
COMPLETENESS: full length.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-237 JAXUCZ010000016.1 84885284-84885520 c
238-326 JAXUCZ010000016.1 84884890-84884978 c
327-381 JAXUCZ010000016.1 84884713-84884767 c
382-462 JAXUCZ010000016.1 84845543-84845623 c
463-597 JAXUCZ010000016.1 84802105-84802239 c
598-642 JAXUCZ010000016.1 84801739-84801783 c
643-759 JAXUCZ010000016.1 84798240-84798356 c
760-831 JAXUCZ010000016.1 84796947-84797018 c
832-867 JAXUCZ010000016.1 84795769-84795804 c
868-930 JAXUCZ010000016.1 84795397-84795459 c
931-966 JAXUCZ010000016.1 84793652-84793687 c
967-1008 JAXUCZ010000016.1 84791838-84791879 c
1009-1101 JAXUCZ010000016.1 84790316-84790408 c
1102-1137 JAXUCZ010000016.1 84789575-84789610 c
1138-1188 JAXUCZ010000016.1 84789066-84789116 c
1189-1233 JAXUCZ010000016.1 84788410-84788454 c
1234-1287 JAXUCZ010000016.1 84784153-84784206 c
1288-1354 JAXUCZ010000016.1 84783379-84783445 c
1355-1465 JAXUCZ010000016.1 84782736-84782846 c
1466-1615 JAXUCZ010000016.1 84782169-84782318 c
1616-1708 JAXUCZ010000016.1 84778032-84778124 c
1709-1863 JAXUCZ010000016.1 84777370-84777524 c
1864-1936 JAXUCZ010000016.1 84774851-84774923 c
1937-2043 JAXUCZ010000016.1 84774656-84774762 c
2044-2245 JAXUCZ010000016.1 84772981-84773182 c
2246-2305 JAXUCZ010000016.1 84772602-84772661 c
2306-2362 JAXUCZ010000016.1 84771332-84771388 c
2363-2470 JAXUCZ010000016.1 84770712-84770819 c
2471-2692 JAXUCZ010000016.1 84769199-84769420 c
2693-2854 JAXUCZ010000016.1 84767290-84767451 c
2855-3025 JAXUCZ010000016.1 84765456-84765626 c
3026-3169 JAXUCZ010000016.1 84764534-84764677 c
3170-3292 JAXUCZ010000016.1 84761412-84761534 c
3293-3474 JAXUCZ010000016.1 84760947-84761128 c
3475-3538 JAXUCZ010000016.1 84760657-84760720 c
3539-3613 JAXUCZ010000016.1 84760443-84760517 c
3614-3721 JAXUCZ010000016.1 84760003-84760110 c
3722-3829 JAXUCZ010000016.1 84759619-84759726 c
3830-3901 JAXUCZ010000016.1 84758515-84758586 c
3902-4027 JAXUCZ010000016.1 84757665-84757790 c
4028-4144 JAXUCZ010000016.1 84756991-84757107 c
4145-4306 JAXUCZ010000016.1 84755854-84756015 c
4307-4405 JAXUCZ010000016.1 84755671-84755769 c
4406-4552 JAXUCZ010000016.1 84755204-84755350 c
4553-4669 JAXUCZ010000016.1 84754949-84755065 c
4670-4861 JAXUCZ010000016.1 84753788-84753979 c
4862-5148 JAXUCZ010000016.1 84752684-84752970 c
5149-6382 JAXUCZ010000016.1 84749672-84750905 c
FEATURES Location/Qualifiers
source 1..6382
/organism="Rattus norvegicus"
/mol_type="mRNA"
/strain="BN"
/db_xref="taxon:10116"
/chromosome="16"
/map="16q12.5"
gene 1..6382
/gene="Col4a2"
/note="collagen type IV alpha 2 chain"
/db_xref="GeneID:306628"
/db_xref="RGD:1308085"
exon 1..237
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 238..326
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
misc_feature 268..270
/gene="Col4a2"
/note="upstream in-frame stop codon"
CDS 283..5406
/gene="Col4a2"
/note="procollagen, type IV, alpha 2; alpha-2 collagen
type IV; collagen alpha-2(IV) chain; collagen, type IV,
alpha 2"
/codon_start=1
/product="collagen alpha-2(IV) chain precursor"
/protein_id="NP_001414185.1"
/db_xref="GeneID:306628"
/db_xref="RGD:1308085"
/translation="
MDRVRFSASGLPLRGWLLLATVTVGLLAQSVLGGVKKSDVPCGGRDCSGGCQCFPEKGARGQPGEVGPQGYNGPPGLQGFPGLQGRKGDKGERGAPGPTGPKGDVGARGVSGFPGADGIPGHPGQGGPRGRPGYDGCNGTRGDAGPQGPSGTGGFPGLPGPQGPKGQKGEPYALSKEDRDKYRGEPGEPGSVGYQGPPGRPGPIGQMGPMGAPGRPGPPGPPGPKGQPGNRGLGFYGEKGEKGDVGQPGPNGIPSDITLIGPTPSTYHPDMYKGEKGSQGEPGIPGITLKGEEGIMGFPGTRGFPGLDGEKGVSGQKGSRGLDGFQGPSGPRGPKGERGELGPPGPPAYSPHPSLAKGARGDPGFQGAHGEPGSRGEPGDPGPVGPPGLSIGDEDSKRGLPGEMGPKGFSGEPGPSAYYPGPPGADGKPGPQGLPGPAGPPGPDGFLFGLKGSEGRVGYPGPSGFPGGRGQKGWKGEAGDCQCGQVIPGLPGLPGPKGFPGVNGEFGKKGDQGDPGLHGIPGFPGFKGAPGIAGAPGPKGVKGDSRTITTKGERGQPGIPGVHGMKGDDGVPGRDGLDGFPGLPGPPGDGIKGPPGDAGLPGTPGTKGFPGEVGPPGQGLPGPKGERGFPGDAGLPGPPGFPGPPGLPGTPGQADCDTGVKRPIGGGQQVVIQPGCVEGPAGSPGQPGPPGPTGAKGIRGIPGFPGASGEQGLKGFPGDPGREGFPGPPGFMGPRGSKGAPGLPGPDGPPGPIGLPGPAGPPGDRGIPGEVLGAQPGARGDAGLPGQPGLKGFPGEIGAPGFRGSQGMPGMPGLKGQPGFPGPSGQPGLSGPPGQHGFPGAPGREGPLGLPGSPGLGGLPGDRGEPGEPGEPGPVGMKGVSGDRGDAGVSGERGHPGSPGFKGMAGMPGIPGQKGDRGSPGMDGFQGMLGLKGRPGFPGIKGEAGFFGVPGLKGLPGEPGVKGNRGDRGPPGPPPLILPGMKDIKGEKGDEGPMGLKGYLGLKGIQGMPGVPGLSGIPGLPGRPGFIKGAKGDIGVPGTPGLPGFPGVSGPPGITGFPGFTGSRGEKGTPGVAGVFGETGPTGDFGDIGDTVDLPGSPGLKGERGVTGIPGLKGLFGEKGAEGDVGFPGITGMAGAQGSPGLKGQTGFPGLTGLQGPQGEPGRIGIPGDKGDFGWPGVPGRPGIPGIRGISGLHGLPGTKGFPGSPGVDAHGDPGFPGPTGDRGDRGEANTLPGPVGAPGQKGEQGIPGERGPVGSPGLQGFPGISPPSNISGLPGDVGAPGIFGLQGYQGPPGPPGPNALPGIKGDEGSSGAAGFPGEKGWVGDPGPQGQPGVHGLPGEKGPKGEQGFMGNTGPSGAVGDRGPKGPKGDQGFPGAPGSMGSPGIPGIPQKIAVQPGTMGPQGRRGLPGALGEMGPQGPPGDPGFRGAPGKAGPQGRGGVSAVPGFRGDQGPMGHQGPIGQEGEPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSYWLSTTAPLPMMPVAEEEIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYFANKYSFWLTTIPEQNFQSTPSADTLKAGLIRTHISRCQVCMKNL"
sig_peptide 283..381
/gene="Col4a2"
/inference="COORDINATES: ab initio prediction:SignalP:6.0"
misc_feature 448..585
/gene="Col4a2"
/note="Collagen triple helix repeat (20 copies); Region:
Collagen; pfam01391"
/db_xref="CDD:460189"
misc_feature <526..>1326
/gene="Col4a2"
/note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
Region: gly_rich_SclB; NF038329"
/db_xref="CDD:468478"
misc_feature <1201..>2115
/gene="Col4a2"
/note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
Region: gly_rich_SclB; NF038329"
/db_xref="CDD:468478"
misc_feature <2371..>3162
/gene="Col4a2"
/note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
Region: gly_rich_SclB; NF038329"
/db_xref="CDD:468478"
misc_feature <2899..>3540
/gene="Col4a2"
/note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
Region: gly_rich_SclB; NF038329"
/db_xref="CDD:468478"
misc_feature 3685..3849
/gene="Col4a2"
/note="Collagen triple helix repeat (20 copies); Region:
Collagen; pfam01391"
/db_xref="CDD:460189"
misc_feature <3952..>4695
/gene="Col4a2"
/note="LPXTG-anchored collagen-like adhesin Scl2/SclB;
Region: gly_rich_SclB; NF038329"
/db_xref="CDD:468478"
misc_feature 4735..5052
/gene="Col4a2"
/note="C-terminal tandem repeated domain in type 4
procollagen; Region: C4; pfam01413"
/db_xref="CDD:460201"
misc_feature 5065..5397
/gene="Col4a2"
/note="C-terminal tandem repeated domain in type 4
procollagen; Region: C4; pfam01413"
/db_xref="CDD:460201"
exon 327..381
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 382..462
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 463..597
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 598..642
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 643..759
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 760..831
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 832..867
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 868..930
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 931..966
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 967..1008
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 1009..1101
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 1102..1137
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 1138..1188
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 1189..1233
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 1234..1287
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 1288..1354
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 1355..1465
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 1466..1615
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 1616..1708
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 1709..1863
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 1864..1936
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 1937..2043
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 2044..2245
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 2246..2305
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 2306..2362
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 2363..2470
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 2471..2692
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 2693..2854
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 2855..3025
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 3026..3169
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 3170..3292
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 3293..3474
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 3475..3538
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 3539..3613
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 3614..3721
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 3722..3829
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 3830..3901
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 3902..4027
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 4028..4144
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 4145..4306
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 4307..4405
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 4406..4552
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 4553..4669
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 4670..4861
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 4862..5148
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
exon 5149..6382
/gene="Col4a2"
/inference="alignment:Splign:2.1.0"
ORIGIN
acttggtgtcgcagggagtccgaacgccggggctctgcgctccgcacccagctcttcccgcgccccgattccacgagccccttggctcgccaatcccgggcaagcaccggcaaggcacgccggggccgggaatccggcgcccaccaagcggagccaggcaggcctggccgccagtgtgtcgcgagccaacgcttcagcaggggcccatgagcgccggcagcagctcctgaccccgaggttaggaagggatcgagccgagcctagagctgaaagactgggatcatggaccgagtgcggttctcagcctctggtcttcccctgagagggtggctgctgctggcgactgtgacagtggggctcctggctcagagcgtcttggggggggtgaagaagtcggatgtgccctgcggagggagagactgcagtgggggctgccagtgcttcccggagaaaggagcacggggtcagccaggggaagtgggcccccaggggtacaatgggcccccagggttgcaaggattcccaggactacagggccgcaaaggagacaagggtgaacggggagctcctggaccaactggaccaaaaggagatgtgggagcgagaggcgtctctggattccccggtgcagatggaattcctgggcacccagggcaaggtggaccccgtggaagaccgggctacgatggttgcaatggaaccagaggagacgccgggccacagggaccctctggaactgggggcttccctggcctccctgggccccaaggacccaaggggcagaaaggcgaaccttacgcactctcgaaagaggaccgtgacaaatatcggggtgagcctggagagcctggctcggtcggctaccaggggcctcctggccgcccagggccaataggacagatgggtcccatgggagcacctggaagaccgggaccaccaggaccccctggacccaaaggacaaccaggcaaccgaggactgggtttttacggagagaagggtgaaaagggtgacgtaggacagccaggacccaatgggatcccatctgacatcacactcattgggcccacgccatcaacgtatcacccggatatgtacaagggtgaaaagggaagtcaaggagagccagggatacccggcataaccttaaaaggcgaggaaggcatcatgggattcccaggaacacggggttttcctggccttgatggagaaaaaggagtctcaggacagaaaggaagcagaggcctggatggtttccaaggccccagtggaccccgaggacccaagggagaacggggagaactaggacccccaggacctccagcctactcaccccatccatccctggcaaaaggtgccagaggtgacccaggattccaaggtgctcatggggagccaggaagccgaggcgagccaggagaccctggacccgtggggcccccaggcctgtccattggagatgaagattcaaagagaggccttccaggggagatgggacccaaaggcttctcgggagagccaggaccctcggcatactatcccggcccaccaggagctgatggaaaaccaggtccccaaggactccccgggcccgcaggcccacctggaccagatggcttcctgtttggcctgaaaggatcagaagggagagtgggttaccccgggccttcaggtttcccaggaggtcgagggcagaaaggatggaaaggtgaagctggagattgccagtgcggccaggtcatcccgggtctcccgggactgccgggacccaaaggttttcctggcgtcaatggggagtttggaaagaaaggtgaccaaggagacccaggcctgcacgggatccctgggttcccgggattcaagggagccccgggcatcgctggagctcctggacccaaaggagtaaagggagactctagaacaatcactaccaaaggtgagcgaggacagccaggtatccctggtgtgcatgggatgaaaggtgatgacggtgtcccgggacgtgacgggctggatggattccctggcctgccgggtcctccgggcgatggcatcaaagggcctccaggggacgcaggtctccctggcacacctggaaccaagggcttcccaggagaagtgggtcctccaggacagggcttacccggcccgaaaggtgaacgtggtttccctggagacgccggactgcctggacctccaggcttcccgggtcctccaggtctcccaggaacaccgggtcaggcagattgtgacacgggtgtgaaaagacctattggaggcggccagcaagtggtcattcagccaggttgtgttgaaggccctgcaggatcacctggccagccaggacccccaggtcccacaggtgccaaaggcatccgaggcatcccaggattcccaggagcttctggagaacaagggctcaagggctttccaggagacccaggccgagaaggtttcccagggcccccagggttcatgggaccccgaggatccaaaggtgccccaggcctccctggcccagatggacccccaggccccattggacttccagggccagctggaccccctggggacagaggaattccaggagaagtgctaggggcccagcctggggcccggggagatgctggactaccaggacagcctgggctaaaagggttcccaggagaaatcggagcacctggattcagaggaagccaagggatgcccgggatgccagggctcaaaggtcagccaggcttcccaggaccttcgggacagccaggactgtctgggcccccaggacaacatggattcccaggagctcctggacgagaggggcctttggggctgccaggctcccctggccttggaggtttgcctggagacaggggtgagcctggtgagcctggtgagcctggccctgtgggcatgaaaggtgtgtctggggacagaggcgacgccggtgtgtcaggcgagcgtggtcatcctggaagccctggatttaaaggaatggcggggatgcccggtatccctgggcagaaaggcgatcgagggtcacctggaatggacggcttccagggcatgttgggacttaagggaagacccggcttcccaggaatcaagggagaggctggattcttcggagtccctggtttgaagggcctgcctggcgagccaggtgttaaaggaaaccgaggggatcggggccccccaggaccacctcctctaatcctgccggggatgaaggacatcaagggagaaaagggagatgaagggccgatgggtctgaaaggctacttgggcttaaaaggcatccaaggaatgcctggggtccctgggctctctggaatccctgggctacctggaaggcctggcttcatcaaaggagccaagggagacatcggagtcccaggcacaccaggtttaccaggatttcctggggtatctggcccccctggaattaccgggttcccaggattcacaggaagccggggcgagaagggtactccaggagtagcaggggtttttggagagactggccccaccggggactttggtgatatcggagacactgtggacttaccaggaagcccaggcctgaagggggaacggggagtcaccggaatcccaggtctcaagggactctttggagagaaaggagctgagggtgacgttggatttcctgggataacaggcatggctggggctcaaggctctcctggacttaaaggacagacaggcttcccggggctcacagggctgcaagggccacagggagagcccggacggatcggaatacctggtgacaagggtgatttcggctggccaggggtacctggtagaccaggcatcccgggaatccgagggatcagcggattacatggcctgccaggcaccaaaggcttccctggatccccaggtgtcgatgcccatggtgacccagggttcccaggccccactggagacaggggtgaccggggagaggccaacacacttccaggccctgtaggagctccagggcagaaaggggagcagggaatcccaggggaacgtggcccagtcggaagcccaggacttcagggttttcctggtatttctccaccatccaacatctctgggttacctggtgatgtgggggcaccaggaatatttggcttgcaaggctaccaaggccctccaggaccaccggggccaaatgcacttcctggaatcaaaggagatgaggggagctcgggagctgcaggtttccccggagagaaaggatgggttggtgacccagggccccagggccagcctggtgttcacggtcttccaggggagaaagggcccaagggtgagcaaggattcatgggcaacactgggccctctggggccgtgggtgacagaggccccaaaggacccaaaggtgaccaaggattcccaggtgctcctggctctatgggatccccaggcatcccgggcatcccccagaagattgctgtccagcctgggaccatgggtccccagggcaggagaggccttcccggtgcactgggagagatggggcctcagggccctcctggagatccaggtttccgaggggcccccggcaaggccggtccccagggcagaggtggtgtgtctgctgttccagggttccggggagaccaagggcccatgggacaccagggtccgattggccaggaaggggagccaggccgtccagggagcccaggcctgccagggatgccaggccgcagcgtaagcattggctacctcctggtgaagcacagccagacggaccaggaacccatgtgccccgtgggcatgaacaagctctggagtgggtacagcctgctgtatttcgagggccaggagaaagcacataatcaggacctggggctggcgggctcctgcctggcacgcttcagcaccatgcccttcctgtactgcaatccgggtgacgtctgctactacgccagccgcaacgacaagtcctactggctctccaccacggccccactgcccatgatgcccgtagctgaggaggaaatcaaaccctacatcagccgctgttcggtgtgtgaggctccggccgtggccattgctgtccacagccaagatgtctctataccccactgccccgctgggtggcggagtttgtggatcggatattcattcctcatgcacactgcagctggggacgaaggcggtggccagtcactggtgtcgccaggcagctgtctggaggacttccgtgcaacaccatttatcgagtgtaacgggggccgtgggacctgccattacttcgctaacaagtacagcttctggctgaccacaattcctgagcagaacttccagagcacaccatccgctgacacgctcaaggccggcctcatccgcacccacatcagccgctgccaagtgtgcatgaagaatctgtgagccgtccaccctgccggccagcagctgtgtggggaggccactttggtgcttatccttttgtatttgtttcaattttgtttgagacattgtctcacttttcatccccgtctagcctggaattaagtaacccaggctggcctccaatttgtggcaaacctcctgcctcagcttcccagatgctgggattacgggcatgggccaccacacccagcttggtgcttactcttaacttattacctcagatgccgaccccaaagttgatcttagtatttttctttaaaaacaaaactaccaaagcaattctgcactagcactcataccaaccatctgtcagcaaatgggcactacttcctctgggctctagcagccatgggccacagccctgctaacacccacctcctaaagccaacacctcggagcagcccatggacccctcaccctgtaggacataaacatcatgccaccaggtgtacccaacaatagctgtctgtgtgccctgcttccactggcagcagggggctcagcttccttcagtcttgtcctagaatggggccgagtctaagggacagcagagactgtggccagtgatagctggggctcactgacacctgctcccacccaaggatgcatgcagtgtgctctatctcgtcctggtttcttggcagaggggaaagtggcacttccaaatccatagccgccacctcataagtccccatatgttggcccctgcctttctaagcccctaacagtagctggcacatggctctgtctctagccaaaccccagggaaggagacatctctctagtcctcaccagcatcggttggaagatactctaagcaagtcattcacagtggtgtcctacaacccgtgtcaccccaaaccccccccacacacacacacacaaccttgttccctgcagccagctgttctgtgactttcctatgtaacaccacaaataaaagatattctaagta
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]