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Previous release (v1)
2024-04-20 18:50:16, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001135157 6041 bp mRNA linear ROD 23-MAR-2023
DEFINITION Rattus norvegicus myosin heavy chain 2 (Myh2), mRNA.
ACCESSION NM_001135157 XM_001077462 XM_001077478 XM_001077494 XM_001077511
XM_001077532 XM_001077547 XM_001077568 XM_001077587 XM_001077603
VERSION NM_001135157.1
KEYWORDS RefSeq; RefSeq Select.
SOURCE Rattus norvegicus (Norway rat)
ORGANISM Rattus norvegicus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Rattus.
REFERENCE 1 (bases 1 to 6041)
AUTHORS Sharlo KA, Paramonova II, Lvova ID, Mochalova EP, Kalashnikov VE,
Vilchinskaya NA, Tyganov SA, Konstantinova TS, Shevchenko TF,
Kalamkarov GR and Shenkman BS.
TITLE Plantar Mechanical Stimulation Maintains Slow Myosin Expression in
Disused Rat Soleus Muscle via NO-Dependent Signaling
JOURNAL Int J Mol Sci 22 (3), 1372 (2021)
PUBMED 33573052
REMARK GeneRIF: Plantar Mechanical Stimulation Maintains Slow Myosin
Expression in Disused Rat Soleus Muscle via NO-Dependent Signaling.
Publication Status: Online-Only
REFERENCE 2 (bases 1 to 6041)
AUTHORS Tornavaca O, Chia M, Dufton N, Almagro LO, Conway DE, Randi AM,
Schwartz MA, Matter K and Balda MS.
TITLE ZO-1 controls endothelial adherens junctions, cell-cell tension,
angiogenesis, and barrier formation
JOURNAL J Cell Biol 208 (6), 821-838 (2015)
PUBMED 25753039
REFERENCE 3 (bases 1 to 6041)
AUTHORS Mizui T, Sekino Y, Yamazaki H, Ishizuka Y, Takahashi H, Kojima N,
Kojima M and Shirao T.
TITLE Myosin II ATPase activity mediates the long-term
potentiation-induced exodus of stable F-actin bound by drebrin A
from dendritic spines
JOURNAL PLoS One 9 (1), e85367 (2014)
PUBMED 24465547
REMARK GeneRIF: Data suggest that the myosin-II mediated drebrin A-actin
exodus might be an initial event in chemical long-term potentiation
(LTP) induction, triggering actin polymerization and spine
enlargement.
Publication Status: Online-Only
REFERENCE 4 (bases 1 to 6041)
AUTHORS Liang Y, Cucchetti M, Roncagalli R, Yokosuka T, Malzac A, Bertosio
E, Imbert J, Nijman IJ, Suchanek M, Saito T, Wulfing C, Malissen B
and Malissen M.
TITLE The lymphoid lineage-specific actin-uncapping protein Rltpr is
essential for costimulation via CD28 and the development of
regulatory T cells
JOURNAL Nat Immunol 14 (8), 858-866 (2013)
PUBMED 23793062
REFERENCE 5 (bases 1 to 6041)
AUTHORS Galic M, Jeong S, Tsai FC, Joubert LM, Wu YI, Hahn KM, Cui Y and
Meyer T.
TITLE External push and internal pull forces recruit curvature-sensing
N-BAR domain proteins to the plasma membrane
JOURNAL Nat Cell Biol 14 (8), 874-881 (2012)
PUBMED 22750946
REFERENCE 6 (bases 1 to 6041)
AUTHORS Wylie SR and Chantler PD.
TITLE Myosin IIA drives neurite retraction
JOURNAL Mol Biol Cell 14 (11), 4654-4666 (2003)
PUBMED 12960431
REFERENCE 7 (bases 1 to 6041)
AUTHORS Martinsson T, Oldfors A, Darin N, Berg K, Tajsharghi H, Kyllerman M
and Wahlstrom J.
TITLE Autosomal dominant myopathy: missense mutation (Glu-706 --> Lys) in
the myosin heavy chain IIa gene
JOURNAL Proc Natl Acad Sci U S A 97 (26), 14614-14619 (2000)
PUBMED 11114175
REFERENCE 8 (bases 1 to 6041)
AUTHORS Lieber RL, Bodine SC, Burkholder TJ, Pierotti DJ and Ryan AF.
TITLE Cloning and in situ hybridization of type 2A and 2B rat skeletal
muscle myosin tail region: implications for filament assembly
JOURNAL Biochem Biophys Res Commun 197 (3), 1312-1318 (1993)
PUBMED 8280148
REFERENCE 9 (bases 1 to 6041)
AUTHORS Larsson L and Moss RL.
TITLE Maximum velocity of shortening in relation to myosin isoform
composition in single fibres from human skeletal muscles
JOURNAL J Physiol 472, 595-614 (1993)
PUBMED 8145163
REFERENCE 10 (bases 1 to 6041)
AUTHORS DeNardi C, Ausoni S, Moretti P, Gorza L, Velleca M, Buckingham M
and Schiaffino S.
TITLE Type 2X-myosin heavy chain is coded by a muscle fiber type-specific
and developmentally regulated gene
JOURNAL J Cell Biol 123 (4), 823-835 (1993)
PUBMED 8227143
COMMENT VALIDATED REFSEQ: This record has undergone validation or
preliminary review. The reference sequence was derived from
JACYVU010000220.1.
On or before Sep 25, 2008 this sequence version replaced
XM_001077547.1, XM_001077462.1, XM_001077511.1, XM_001077587.1,
XM_001077478.1, XM_001077603.1, XM_001077532.1, XM_001077494.1,
XM_001077568.1.
Sequence Note: The RefSeq transcript and protein were derived from
genomic sequence to make the sequence consistent with the reference
genome assembly. The genomic coordinates used for the transcript
record were based on alignments.
Publication Note: This RefSeq record includes a subset of the
publications that are available for this gene. Please see the Gene
record to access additional publications.
##RefSeq-Attributes-START##
RefSeq Select criteria :: based on conservation, expression,
longest protein
##RefSeq-Attributes-END##
COMPLETENESS: complete on the 3' end.
PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP
1-22 JACYVU010000220.1 8681596-8681617
23-65 JACYVU010000220.1 8681762-8681804
66-289 JACYVU010000220.1 8683622-8683845
290-433 JACYVU010000220.1 8683951-8684094
434-590 JACYVU010000220.1 8685456-8685612
591-618 JACYVU010000220.1 8686627-8686654
619-733 JACYVU010000220.1 8686737-8686851
734-826 JACYVU010000220.1 8686936-8687028
827-890 JACYVU010000220.1 8687570-8687633
891-989 JACYVU010000220.1 8687752-8687850
990-1093 JACYVU010000220.1 8688569-8688672
1094-1232 JACYVU010000220.1 8689107-8689245
1233-1351 JACYVU010000220.1 8689573-8689691
1352-1501 JACYVU010000220.1 8689783-8689932
1502-1672 JACYVU010000220.1 8690970-8691140
1673-1982 JACYVU010000220.1 8691230-8691539
1983-2062 JACYVU010000220.1 8692182-8692261
2063-2150 JACYVU010000220.1 8693765-8693852
2151-2268 JACYVU010000220.1 8693939-8694056
2269-2392 JACYVU010000220.1 8695419-8695542
2393-2529 JACYVU010000220.1 8695629-8695765
2530-2785 JACYVU010000220.1 8696999-8697254
2786-3028 JACYVU010000220.1 8698653-8698895
3029-3205 JACYVU010000220.1 8699007-8699183
3206-3351 JACYVU010000220.1 8699267-8699412
3352-3442 JACYVU010000220.1 8699494-8699584
3443-3832 JACYVU010000220.1 8699672-8700061
3833-3959 JACYVU010000220.1 8700666-8700792
3960-4078 JACYVU010000220.1 8701745-8701863
4079-4275 JACYVU010000220.1 8701997-8702193
4276-4459 JACYVU010000220.1 8702817-8703000
4460-4625 JACYVU010000220.1 8703081-8703246
4626-4750 JACYVU010000220.1 8703347-8703471
4751-5059 JACYVU010000220.1 8703626-8703934
5060-5263 JACYVU010000220.1 8704019-8704222
5264-5389 JACYVU010000220.1 8704969-8705094
5390-5560 JACYVU010000220.1 8705170-8705340
5561-5665 JACYVU010000220.1 8705424-8705528
5666-5761 JACYVU010000220.1 8705621-8705716
5762-6041 JACYVU010000220.1 8707815-8708094
FEATURES Location/Qualifiers
source 1..6041
/organism="Rattus norvegicus"
/mol_type="mRNA"
/strain="BN"
/db_xref="taxon:10116"
/chromosome="10"
/map="10q24"
gene 1..6041
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/note="myosin heavy chain 2"
/db_xref="GeneID:691644"
/db_xref="RGD:620354"
exon 1..22
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 23..65
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
misc_feature 62..64
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/note="upstream in-frame stop codon"
exon 66..289
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
CDS 86..5914
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/note="myosin, heavy polypeptide 2, skeletal muscle,
adult; 2A myosin heavy chain; myosin heavy chain type IIx;
myosin heavy chain IIa; myosin, heavy chain 2, skeletal
muscle, adult"
/codon_start=1
/product="myosin-2"
/protein_id="NP_001128629.1"
/db_xref="GeneID:691644"
/db_xref="RGD:620354"
/translation="
MSSDSEMAVFGEAAPYLRKSEKERIEAQNRPFDAKTSVFVAEPKESFVKGTIQSKDAGKVTVKTEAGATLTVKEDQIFPMNPPKYDKIEDMAMMTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLPVYNPEVVAAYRGKKRQEAPPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAVTGEKKKEEVTSGKMQGTLEDQIISANPLLEAFGNAKTVRNDNSSRFGKFIRIHFGTTGKLASADIETYLLEKSRVTFQLKAERSYHIFYQITSNKKPELIEMLLITTNPYDYPFVSQGEISVASIDDQEELMATDSAIDILGFTNDEKVSIYKLTGAVMHYGNMKFKQKQREEQAEPDGTEVADKAAYLQGLNSADLLKALCYPRVKVGNEYVTKGQTVEQVTNAVGALAKAMYEKMFLWMVTRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSLEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWTFIDFGMDLAACIELIEKPMGIFSILEEECMFPKATDTSFKNKLYEQHLGKSANFQKPKVVKGKAEAHFSLIHYAGTVDYNITGWLDKNKDPLNETVVGLYQKSSMKTLAYLFSGAQTAEAEASSGGAAKKGAKKKGSSFQTVSALFRENLNKLMTNLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIRICRKGFPSRILYADFKQRYKVLNASAIPEGQYIDSKKASEKLLGSIDIDHTQYKFGHTKVFFKAGLLGLLEEMRDDKLAQLITRTQAMCRGFLARVEYQKMVERRESIFCIQYNIRAFMNVKHWPWMKLFFKIKPLLKSAETEKEMATMKEEFQKTKDELAKSEAKRKELEEKMVSLLKEKNDLQLQVQAEAEGLADAEERCDQLIKTKIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATENKVKNLTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKIKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESIMDIENEKQQLDERLKKKEFEMSNLQSKIEDEQAIGIQLQKKIKELQARIEELEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQKMRRDLEEATLQHEATAATLRKKHADSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNVETVSKAKGNLEKMCRTLEDQVSELKSKEEEQQRLINDLTTQRGRLQTESGEFSRQLDEKEALVSQLSRGKQAFTQQIEELKRQLEEEVKAKNALAHALQSSRHDCDLLREQYEEEQESKAELQRALSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQAAEEHVEAVNAKCASLEKTKQRLQNEVEDLMLDVERTNAACAALDKKQRNFDKILAEWKQKYEETHAELEASQKEARSLGTELFKMKNAYEESLDQLETLKRENKNLQQEISDLTEQIAEGGKRIHELEKIKKQVEQEKCELQAALEEAEASLEHEEGKILRIQLELNQVKSEIDRKIAEKDEEIDQLKRNHIRVVESMQSTLDAEIRSRNDAIRIKKKMEGDLNEMEIQLNHANRMAAEALRNYRNTQGILKDTQLHLDDALRGQEDLKEQLAMVERRANLLQAEIEELRATLEQTERSRKIAEQELLDASERVQLLHTQNTSLINTKKKLETDISQIQGEMEDIVQEARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNMEQTVKDLQLRLDEAEQLALKGGKKQIQKLEARVRELEGEVESEQKRNVEAVKGLRKHERRVKELTYQTEEDRKNILRLQDLVDKLQAKVKSYKRQAEEAEEQSNTNLSKFRKLQHELEEAEERADIAESQVNKLRVKSREVHTKVISEE"
misc_feature 182..316
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/note="Myosin N-terminal SH3-like domain; Region:
Myosin_N; pfam02736"
/db_xref="CDD:426949"
misc_feature 383..2404
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/note="Myosin and Kinesin motor domain; Region:
Motor_domain; cl22853"
/db_xref="CDD:451428"
misc_feature order(464..469,620..643,791..796,1475..1492)
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/note="ATP binding site [chemical binding]; other site"
/db_xref="CDD:276814"
misc_feature 2642..5875
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/note="Myosin tail; Region: Myosin_tail_1; pfam01576"
/db_xref="CDD:426331"
exon 290..433
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 434..590
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 591..618
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 619..733
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 734..826
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 827..890
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 891..989
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 990..1093
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 1094..1232
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 1233..1351
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 1352..1501
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 1502..1672
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 1673..1982
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 1983..2062
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 2063..2150
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 2151..2268
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 2269..2392
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 2393..2529
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 2530..2785
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 2786..3028
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 3029..3205
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 3206..3351
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 3352..3442
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 3443..3832
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 3833..3959
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 3960..4078
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 4079..4275
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 4276..4459
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 4460..4625
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 4626..4750
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 4751..5059
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 5060..5263
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 5264..5389
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 5390..5560
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 5561..5665
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 5666..5761
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
exon 5762..6041
/gene="Myh2"
/gene_synonym="Myh1; Myh2a; MyHC-2A; MyHC-IIA"
/inference="alignment:Splign:2.1.0"
ORIGIN
tcctgctttaaaaagctccaaggaccctcttacttcccagctgcaccttctcatttgccaataagggtctgtgagttcagcagccatgagttccgactctgagatggccgttttcggggaggctgctccttacctccggaagtctgaaaaggagcgaatcgaggcccagaataggccttttgatgccaaaacatctgtctttgtggcggagcccaaggagtcctttgtcaaaggaaccattcagagcaaagacgcagggaaagtgactgtgaaaactgaagcaggagcgaccctgacggtgaaagaagaccagatcttccccatgaaccctcccaagtacgacaagatcgaggacatggccatgatgacccacctccacgagcccgctgtgctgtacaacctcaaagagcgttacgcagcctggatgatctacacctactcgggcctcttctgtgtcactgtcaacccctacaagtggctgccagtgtacaaccctgaggtggtggctgcctaccgtggcaaaaagcgacaggaggccccgccccacatcttctccatctctgacaatgcctaccagttcatgctaactgaccgggagaatcagtcaatcctgatcaccggagaatccggggccgggaagactgtgaacacgaagcgtgtcatccagtactttgcaacaattgcagtcactggggagaaaaagaaggaggaggtgacttctggcaaaatgcaggggaccctggaagatcaaatcatcagtgccaaccctctgctggaggcctttgggaatgccaagaccgtgaggaatgacaactcctctcgctttggtaaattcatcaggattcactttggcaccacggggaaactggcatccgctgacatcgagacatatctgctagagaagtcccgggtcactttccagcttaaggcggaaaggagctaccatatattttatcaaatcacatccaacaagaagccagagctgatcgaaatgctgctgatcaccacaaacccatacgattacccattcgtcagtcaaggggagatcagtgtggccagcattgatgaccaggaagaactgatggccacggatagtgctattgacattctgggctttacaaatgatgaaaaggtctccatctataagctcacgggagctgtgatgcattatgggaacatgaagttcaagcagaagcagcgggaagaacaggctgagccggatggcacggaagtggctgacaaggctgcctatcttcagggtctgaactctgctgacctgctcaaagccctttgttaccccagggtcaaggtcggcaatgagtacgtcaccaaaggccagactgtggagcaggtgaccaacgctgtgggtgccctggccaaggccatgtacgagaagatgttcctgtggatggtcacccgcatcaaccagcagctggacaccaagcagcccaggcagtacttcatcggggtcttggacatcgctggctttgagatctttgatttcaacagcctggagcagctgtgcatcaacttcaccaacgagaaactgcaacagtttttcaaccaccacatgttcgtgctggagcaggaggagtacaagaaggaaggcatcgagtggaccttcatcgacttcgggatggacctggcggcctgcatcgagctcatcgagaagccgatgggcatcttctccatcctggaagaggagtgcatgttccccaaggcgacagacacctccttcaagaacaagctgtatgaacagcatcttggaaagtccgccaacttccagaagcctaaggtggtcaaaggcaaagccgaggcccacttctccctcatccactatgcgggcaccgtggattacaacatcactggctggctggacaagaacaaggaccccctgaatgagaccgtggtggggctgtaccagaagtcttcaatgaaaactcttgcttacctcttctctggagctcaaactgctgaagcagaggcaagtagtggtggagctgccaagaaaggtgctaagaagaaagggtcctccttccagacagtgtctgccctgttcagagagaacttgaacaagctgatgaccaacctcaggagcacccaccctcattttgtgaggtgtatcatccccaatgaaaccaagacacctggtgccatggagcacgaactggtcctgcaccagctgaggtgtaacggggtgctagaaggcatccgcatctgcaggaaggggttccccagcaggatcctctacgcagacttcaagcagagatacaaggtgttaaatgcaagtgccatccctgagggtcagtacatagatagcaagaaggcttctgagaagctccttggctccatcgacattgaccacactcagtataagtttggtcacaccaaggtctttttcaaagctggtcttctggggctcctagaggagatgagagatgacaagttggcccagctgattacccggacgcaggccatgtgcagagggttcttggcaagagtggagtaccagaagatggtggagcgaagagagtccatcttctgcatccagtacaacatccgcgccttcatgaacgtcaagcactggccctggatgaaactcttcttcaagatcaaaccactgctgaagagcgctgagaccgagaaggagatggccaccatgaaggaggagttccagaaaaccaaggatgaacttgccaaatcggaggcaaagaggaaggaacttgaagaaaagatggtgtccctgttgaaagaaaaaaatgacttgcaactccaagttcaggctgaagctgaaggcttggctgatgctgaggaaagatgcgaccagctgatcaaaaccaaaatccagctggaggccaaaatcaaagaggtgactgagagagctgaggatgaggaagagatcaacgccgagctcacggccaagaagaggaagctggaggacgagtgctcagagctgaagaaagacatcgatgaccttgagctgacactggccaaggttgagaaggagaagcacgccacggagaacaaggtgaaaaacctcacagaggagatggcgggcctggacgaaaccatcgccaagctgaccaaggagaagaaggccctgcaggaggcccaccagcagaccctggatgacctgcaggcagaggaggacaaagtcaacaccctgaccaaagccaaaatcaagctggaacagcaagtggatgatcttgaagggtccttggagcaagaaaagaagcttcgcatggacctagaaagagccaagagaaaacttgagggtgacttgaagttagcccaggagtccatcatggacattgaaaatgagaaacagcagcttgatgaaaggctcaaaaagaaagagtttgaaatgagcaacctgcagagcaagatcgaggatgagcaggccatcggcattcaactgcagaagaagatcaaggagttgcaggctcgcattgaggagctggaggaggaaatcgaggcagagcgggcctccagggccaaagcagagaagcagcgctctgacctctcccgggaactggaggagatcagcgagcggctggaagaagccggcggggccacttcagcccagatcgagatgaacaagaagagagaggccgagttccagaaaatgcgcagggacctggaggaggccaccctgcagcacgaagccacagcagccaccctgaggaagaagcacgcggacagcgtggctgagctcggggagcagattgacaacctgcagcgggtgaagcagaagctggagaaggagaagagcgagatgaagatggagatcgacgacctcgctagtaatgtagagacagtgtctaaggccaagggaaacctagagaagatgtgccgcaccctggaggaccaggtgagtgagctgaagtcgaaggaggaggaacaacagcgcctgatcaacgacctgaccacccagagaggacgcctgcagaccgaatccggtgaattttcccggcagcttgatgagaaggaagcgctggtttctcagttatcaaggggcaagcaagcatttacccaacagattgaggagctgaagaggcagctggaagaggaagtaaaggccaagaacgcgctagcccacgccctgcagtcctcccgccatgactgtgacctgcttcgggaacagtacgaggaggagcaggaatctaaggccgagctgcagagggcgctgtccaaggccaacagtgaggtggcccagtggaggaccaaatatgagacggatgccatccagcgcacggaggagctggaggaggccaagaaaaagctggctcagcgtctgcaggcggctgaggagcacgtagaagccgtgaacgccaagtgtgcttccctggagaagactaagcagcggttgcagaacgaggtggaggacctcatgctggacgtagagaggaccaacgctgcctgtgctgccctggacaagaagcagagaaacttcgacaagatcctggcagagtggaagcagaagtatgaggaaacacatgctgagctggaggcatcccagaaggaagcccgctccctgggtactgagctcttcaagatgaagaacgcctacgaggagtccctggatcagctggaaaccctgaagcgagagaataagaacttacagcaggagatttctgacctcacggaacagattgcagaaggaggaaagcgcatccacgaactggagaaaataaagaaacaagtcgaacaagagaagtgtgaacttcaggctgctctagaagaagcagaggcatctctggagcacgaggagggaaagatcctgcgcatccagctggagctgaaccaagtcaagtctgagatcgacaggaagattgctgagaaggatgaggagatcgaccagctgaagagaaaccacattcgagtcgtggagtccatgcaaagcacgctggacgccgagatcaggagcaggaacgacgccatcaggatcaagaagaagatggagggagatctcaatgagatggaaatccagctgaaccacgccaaccgcatggctgctgaggccctgagaaactacaggaacacccaaggcatcctcaaggacacccagctgcacctggatgacgctctccggggccaggaggacctgaaggagcagctggccatggtggagcgcagagccaacctgctgcaggctgagatcgaggagctgcgggccactctggagcagactgagaggagcaggaagattgcagagcaggaactgctggacgccagtgagcgcgtgcagctcctccacacccagaacaccagcctcatcaacaccaagaagaagctggagacagacatttcccagatccagggagagatggaggacatcgtccaggaagcccgcaatgcagaagagaaggccaagaaagccatcactgacgccgccatgatggcggaggagctgaagaaggagcaggacaccagcgcccatctggagcggatgaagaagaacatggagcagacggtgaaggacctgcaactgcgtctggacgaggctgagcagctggcgctgaagggcggcaagaagcagatccagaaactggaggccagagtgcgtgaactggagggtgaggtagagagtgagcagaagcggaatgttgaggctgtcaaagggcttcgaaaacacgagaggcgagtgaaggagcttacttaccagacagaagaagaccgaaaaaatatcctcaggcttcaagatttggtggataaactccaagcaaaagtaaaatcttacaagagacaagctgaggaggctgaggaacaatccaacacaaatctatccaagttccgcaagctgcagcatgagctggaggaagccgaggagcgggctgacatcgccgagtcccaggtcaacaagctgcgggtgaagagccgcgaggttcacactaaagtcataagtgaagagtaaggcagctctgatgctgtagaatgaccgaagagaggcacaaaatgtgaagcctttggtcatgtccccatgtgattctatttaatcctattgtaaggaaataaagagcccaagttctttgcaagcaata
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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