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2024-03-28 20:07:51, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       NM_001126294            3368 bp    mRNA    linear   ROD 21-MAR-2023
DEFINITION  Rattus norvegicus DNA damage-induced apoptosis suppressor (Ddias),
            mRNA.
ACCESSION   NM_001126294 XM_001062994 XM_574490
VERSION     NM_001126294.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3368)
  AUTHORS   Won KJ, Im JY, Yun CO, Chung KS, Kim YJ, Lee JS, Jung YJ, Kim BK,
            Song KB, Kim YH, Chun HK, Jung KE, Kim MH and Won M.
  TITLE     Human Noxin is an anti-apoptotic protein in response to DNA damage
            of A549 non-small cell lung carcinoma
  JOURNAL   Int J Cancer 134 (11), 2595-2604 (2014)
   PUBMED   24214091
REFERENCE   2  (bases 1 to 3368)
  AUTHORS   Nakaya N, Hemish J, Krasnov P, Kim SY, Stasiv Y, Michurina T,
            Herman D, Davidoff MS, Middendorff R and Enikolopov G.
  TITLE     noxin, a novel stress-induced gene involved in cell cycle and
            apoptosis
  JOURNAL   Mol Cell Biol 27 (15), 5430-5444 (2007)
   PUBMED   17515607
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC166470.1.
            
            On or before Jul 13, 2008 this sequence version replaced
            XM_574490.2, XM_001062994.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC166470.1, EV774624.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..3368
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q32"
     gene            1..3368
                     /gene="Ddias"
                     /gene_synonym="noxin; RGD1559690"
                     /note="DNA damage-induced apoptosis suppressor"
                     /db_xref="GeneID:499204"
                     /db_xref="RGD:1559690"
     exon            1..72
                     /gene="Ddias"
                     /gene_synonym="noxin; RGD1559690"
                     /inference="alignment:Splign:2.1.0"
     exon            73..156
                     /gene="Ddias"
                     /gene_synonym="noxin; RGD1559690"
                     /inference="alignment:Splign:2.1.0"
     exon            157..285
                     /gene="Ddias"
                     /gene_synonym="noxin; RGD1559690"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    164..166
                     /gene="Ddias"
                     /gene_synonym="noxin; RGD1559690"
                     /note="upstream in-frame stop codon"
     CDS             173..2824
                     /gene="Ddias"
                     /gene_synonym="noxin; RGD1559690"
                     /note="nitric oxide-inducible gene protein"
                     /codon_start=1
                     /product="DNA damage-induced apoptosis suppressor protein"
                     /protein_id="NP_001119766.1"
                     /db_xref="GeneID:499204"
                     /db_xref="RGD:1559690"
                     /translation="
MNRRRKFLFASVLALQNSSFIYPSCQRCFSRIFLESKRFTCPKCGCTGDAESANYRYRLSLKVAESNTLFVITVFGSCLDTYFGLTATGLHRYLKDSSKIPETLDSGRTQSLLTTAVEKCFVGQSFVFGVTNFGDVCGHHSNCSNFQQPCCKHRGEVRTLVASQIVLPDPRVTGFTVIDYLHPLLHRKHHCDSQDHSSQSLTSDHSDSEFNSIQGSGNTSWVLESSREDFFRFWQPSLELTSTDSHITSNDDFPPSEQLVASGTPTQNGHCVSFSEVTSSNNCHDSLQSLWSFVSCMDKNNTTGKLGEELGLLSPICSSCHESRLTDSNFFPSQMQKPFKEHNLECYSKAEKNDYSQYDIPCYQHREVNTTILQQGSSAFSLSSLKPEETASASQKSDSLIWDDIPFSESLNKFLAVVESEIAVAEIDTQNRKQGTDNSTDKCHKNYSRLSLTPLRDTRALNTPPFGLRSSQAMRENSRREAFFYNSKSSSSSQIQRESHPDKAAAAVSIGSNRSDISKDFLPDTCSSALFTSSDDMEASISQKRTSGVLQQRNEISCRLRTSISDCSDLSNSCFTGCEEKSHSGTKEKLAIQNCSKKYNDVSDLHKLENKRSYRWPEKQDDNFTISRKLTYPLETFRGSPKSISKEKPYRPSNNNLTQSSSADHEGSYNASADLFDDFAKDKDTETEITKLPQDILLPLEASCTENYPINENCNHPSQKLSLQSISPSEYQRPSSQSDSECDFEESQEDFVPCSQSTPVAGFHQRIHGLNGASKILPSFYSHLNANYKNTNISPLTGKCQATPTCPKNVKTSTQKLNHCPAAECLENDMDEWVPPTTKKVFISDVCGLRVTCLRKCLAVHYSPDQKELPRKKLIKVTHKTNK"
     misc_feature    194..580
                     /gene="Ddias"
                     /gene_synonym="noxin; RGD1559690"
                     /note="Replication protein A, class 2b aminoacyl-tRNA
                     synthetases, and related proteins with
                     oligonucleotide/oligosaccharide (OB) fold; Region:
                     RPA_2b-aaRSs_OBF_like; cl09930"
                     /db_xref="CDD:447862"
     exon            286..447
                     /gene="Ddias"
                     /gene_synonym="noxin; RGD1559690"
                     /inference="alignment:Splign:2.1.0"
     exon            448..565
                     /gene="Ddias"
                     /gene_synonym="noxin; RGD1559690"
                     /inference="alignment:Splign:2.1.0"
     exon            566..3340
                     /gene="Ddias"
                     /gene_synonym="noxin; RGD1559690"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
ttggagagcggctgtccgggaggccggagttccttcatggttgcccgggcttgcctgggtcctttgcttcagataaaattttaagtgcctcccattatgccaagaagggccaggttttggatgacttcaattaccaatagagactgctgtcctagggacaagatagaggcacatgaatagaagacggaaattcctttttgcctcagtacttgctctccagaattcgagttttatatatccatcatgtcaaaggtgcttctccaggatattccttgagtccaaaaggtttacttgtcccaagtgtggctgtaccggtgatgctgagagtgccaactacagatatagactgtccttgaaagtggcagagtccaacacgttatttgtcattactgtgtttgggagctgcttagatacttattttggactcactgctactggtttacacaggtaccttaaggattctagtaaaatcccagaaaccctggacagtggtagaactcagagcctgttgaccacagcagtagaaaagtgttttgttggacaaagctttgtgtttggagtaacgaactttggagatgtatgtggacaccattccaattgcagtaacttccagcagccttgctgtaagcacagaggagaagtcaggacactcgtagcctcccagatcgtcctgcctgacccgcgtgttacaggcttcactgtcattgactatttacatccgcttttacacaggaaacatcactgtgactctcaggaccatagcagccagtcactcacttcagatcactcagacagcgagttcaacagcatacagggctctgggaatacatcctgggttttggagtctagcagagaggactttttcagattctggcagccatctcttgagctgacgtctactgattcacacataacatctaatgatgacttcccaccttcagaacagctcgtggccagtggtactcctacccaaaacggacactgcgtctccttctctgaggtcactagttctaacaactgccacgattccctccagagtttatggagctttgtttcttgtatggacaagaataatacaacaggaaagttgggtgaagaattaggtttactgagtccaatttgcagcagttgtcatgaaagtagactgactgactctaattttttcccttcacaaatgcaaaaaccctttaaggaacataatttagaatgctatagtaaagcagaaaaaaatgattactcccagtatgatatcccatgttaccagcatcgtgaagtaaataccaccattcttcaacagggatcttctgcattttcattgtcatcactgaaacccgaagaaacagcgagtgcttcccagaagtctgactccttgatttgggatgatataccattctctgaaagcctgaacaagtttctagcagttgttgaaagtgagattgctgtagctgagatagatactcagaatagaaagcagggtacagataacagcactgataaatgccacaaaaactacagcagattatcattgactcctctgagagatactagagccttaaatacgccgcctttcggcttaaggtcatcacaagcaatgagagaaaactcaaggagagaggccttcttttataacagtaagtctagttcaagttctcaaatccaaagagaatcacatccagacaaggcagcagcggctgtctctataggcagtaataggagcgatatctccaaggattttctaccagatacttgttcatcagctctgtttacatcttcagatgacatggaagcctccattagccaaaagaggactagtggggtcctgcaacaaaggaatgaaatttcgtgcaggctcagaacctcaataagtgactgttctgatctcagtaacagctgttttactggatgtgaagaaaaatcgcattcaggaacaaaagaaaaattggcaatacaaaactgttctaaaaaatacaatgatgtttctgatcttcacaaattagaaaataagcggagttatagatggccggaaaagcaagatgacaatttcacaattagccggaaactcacatatcctttagagacctttcgcgggagcccaaaaagcatatcaaaagaaaagccttataggcctagcaataataacttaacacaaagttcttctgctgatcatgaaggcagctacaatgcttctgctgatctttttgatgattttgctaaagataaggacactgaaacagaaattaccaaactaccgcaagatattttgttaccactggaagcatcttgcacagaaaattatcctataaatgagaactgcaaccatccttcacaaaaactctccttgcaaagcatatcaccctcagagtatcaaagaccaagctctcagtcagactcagaatgtgattttgaagaaagccaagaagactttgttccatgttcacagtcaactccagttgcaggcttccaccaaagaattcatggcttaaatggtgcttccaaaatactgccttccttctattcacatcttaatgctaattataaaaacacaaacatttctcctctaactggcaaatgtcaagccaccccaacctgcccaaagaatgtaaaaacatctacgcagaagctcaaccactgccctgctgctgagtgccttgaaaatgatatggatgaatgggtcccccctactactaaaaaagtatttatttcagatgtttgtggattgagagtcacgtgtttaagaaaatgccttgctgtccattattcccctgaccaaaaagagttaccaaggaagaaactgataaaagtcacacataaaaccaacaaataattaagaagttaaagactatattttgtaccaataattacaaaaccaaaagtgtcttaagtgtgattgtaaatgatcaggctgaaagtaggaaaagtccatttggggatggcctttcaggagtcaagtggaagtcatcttcccttttcataatacttcagtgtctgataaaaaaagtacttggtttactcaaagtatttccatataaagtcataggaatccagttcccagaaattttaagcaatggcaaatctatttggaaatttttgctttcactgatacagagagcagtctatattttgaacacttacagaaagtcattaatagaaaatggactgtactgtgtgctgttggatctttcaagattttcaccatggctttttttttcctccagaatactgtaatttagataactgagcacttttccttacattgactgtattaatatgttggttttgtatatttaaaagtatttgttaaaatatagacatacagaaataaagtctttacaaattaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]