2024-05-04 23:18:25, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001126294 3368 bp mRNA linear ROD 21-MAR-2023 DEFINITION Rattus norvegicus DNA damage-induced apoptosis suppressor (Ddias), mRNA. ACCESSION NM_001126294 XM_001062994 XM_574490 VERSION NM_001126294.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 3368) AUTHORS Won KJ, Im JY, Yun CO, Chung KS, Kim YJ, Lee JS, Jung YJ, Kim BK, Song KB, Kim YH, Chun HK, Jung KE, Kim MH and Won M. TITLE Human Noxin is an anti-apoptotic protein in response to DNA damage of A549 non-small cell lung carcinoma JOURNAL Int J Cancer 134 (11), 2595-2604 (2014) PUBMED 24214091 REFERENCE 2 (bases 1 to 3368) AUTHORS Nakaya N, Hemish J, Krasnov P, Kim SY, Stasiv Y, Michurina T, Herman D, Davidoff MS, Middendorff R and Enikolopov G. TITLE noxin, a novel stress-induced gene involved in cell cycle and apoptosis JOURNAL Mol Cell Biol 27 (15), 5430-5444 (2007) PUBMED 17515607 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC166470.1. On or before Jul 13, 2008 this sequence version replaced XM_574490.2, XM_001062994.1. ##Evidence-Data-START## Transcript exon combination :: BC166470.1, EV774624.1 [ECO:0000332] RNAseq introns :: single sample supports all introns SAMEA5760383, SAMEA5760389 [ECO:0000348] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on single protein-coding transcript ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..3368 /organism="Rattus norvegicus" /mol_type="mRNA" /db_xref="taxon:10116" /chromosome="1" /map="1q32" gene 1..3368 /gene="Ddias" /gene_synonym="noxin; RGD1559690" /note="DNA damage-induced apoptosis suppressor" /db_xref="GeneID:499204" /db_xref="RGD:1559690" exon 1..72 /gene="Ddias" /gene_synonym="noxin; RGD1559690" /inference="alignment:Splign:2.1.0" exon 73..156 /gene="Ddias" /gene_synonym="noxin; RGD1559690" /inference="alignment:Splign:2.1.0" exon 157..285 /gene="Ddias" /gene_synonym="noxin; RGD1559690" /inference="alignment:Splign:2.1.0" misc_feature 164..166 /gene="Ddias" /gene_synonym="noxin; RGD1559690" /note="upstream in-frame stop codon" CDS 173..2824 /gene="Ddias" /gene_synonym="noxin; RGD1559690" /note="nitric oxide-inducible gene protein" /codon_start=1 /product="DNA damage-induced apoptosis suppressor protein" /protein_id="NP_001119766.1" /db_xref="GeneID:499204" /db_xref="RGD:1559690" /translation="
MNRRRKFLFASVLALQNSSFIYPSCQRCFSRIFLESKRFTCPKCGCTGDAESANYRYRLSLKVAESNTLFVITVFGSCLDTYFGLTATGLHRYLKDSSKIPETLDSGRTQSLLTTAVEKCFVGQSFVFGVTNFGDVCGHHSNCSNFQQPCCKHRGEVRTLVASQIVLPDPRVTGFTVIDYLHPLLHRKHHCDSQDHSSQSLTSDHSDSEFNSIQGSGNTSWVLESSREDFFRFWQPSLELTSTDSHITSNDDFPPSEQLVASGTPTQNGHCVSFSEVTSSNNCHDSLQSLWSFVSCMDKNNTTGKLGEELGLLSPICSSCHESRLTDSNFFPSQMQKPFKEHNLECYSKAEKNDYSQYDIPCYQHREVNTTILQQGSSAFSLSSLKPEETASASQKSDSLIWDDIPFSESLNKFLAVVESEIAVAEIDTQNRKQGTDNSTDKCHKNYSRLSLTPLRDTRALNTPPFGLRSSQAMRENSRREAFFYNSKSSSSSQIQRESHPDKAAAAVSIGSNRSDISKDFLPDTCSSALFTSSDDMEASISQKRTSGVLQQRNEISCRLRTSISDCSDLSNSCFTGCEEKSHSGTKEKLAIQNCSKKYNDVSDLHKLENKRSYRWPEKQDDNFTISRKLTYPLETFRGSPKSISKEKPYRPSNNNLTQSSSADHEGSYNASADLFDDFAKDKDTETEITKLPQDILLPLEASCTENYPINENCNHPSQKLSLQSISPSEYQRPSSQSDSECDFEESQEDFVPCSQSTPVAGFHQRIHGLNGASKILPSFYSHLNANYKNTNISPLTGKCQATPTCPKNVKTSTQKLNHCPAAECLENDMDEWVPPTTKKVFISDVCGLRVTCLRKCLAVHYSPDQKELPRKKLIKVTHKTNK"
misc_feature 194..580 /gene="Ddias" /gene_synonym="noxin; RGD1559690" /note="Replication protein A, class 2b aminoacyl-tRNA synthetases, and related proteins with oligonucleotide/oligosaccharide (OB) fold; Region: RPA_2b-aaRSs_OBF_like; cl09930" /db_xref="CDD:447862" exon 286..447 /gene="Ddias" /gene_synonym="noxin; RGD1559690" /inference="alignment:Splign:2.1.0" exon 448..565 /gene="Ddias" /gene_synonym="noxin; RGD1559690" /inference="alignment:Splign:2.1.0" exon 566..3340 /gene="Ddias" /gene_synonym="noxin; RGD1559690" /inference="alignment:Splign:2.1.0" ORIGIN
ttggagagcggctgtccgggaggccggagttccttcatggttgcccgggcttgcctgggtcctttgcttcagataaaattttaagtgcctcccattatgccaagaagggccaggttttggatgacttcaattaccaatagagactgctgtcctagggacaagatagaggcacatgaatagaagacggaaattcctttttgcctcagtacttgctctccagaattcgagttttatatatccatcatgtcaaaggtgcttctccaggatattccttgagtccaaaaggtttacttgtcccaagtgtggctgtaccggtgatgctgagagtgccaactacagatatagactgtccttgaaagtggcagagtccaacacgttatttgtcattactgtgtttgggagctgcttagatacttattttggactcactgctactggtttacacaggtaccttaaggattctagtaaaatcccagaaaccctggacagtggtagaactcagagcctgttgaccacagcagtagaaaagtgttttgttggacaaagctttgtgtttggagtaacgaactttggagatgtatgtggacaccattccaattgcagtaacttccagcagccttgctgtaagcacagaggagaagtcaggacactcgtagcctcccagatcgtcctgcctgacccgcgtgttacaggcttcactgtcattgactatttacatccgcttttacacaggaaacatcactgtgactctcaggaccatagcagccagtcactcacttcagatcactcagacagcgagttcaacagcatacagggctctgggaatacatcctgggttttggagtctagcagagaggactttttcagattctggcagccatctcttgagctgacgtctactgattcacacataacatctaatgatgacttcccaccttcagaacagctcgtggccagtggtactcctacccaaaacggacactgcgtctccttctctgaggtcactagttctaacaactgccacgattccctccagagtttatggagctttgtttcttgtatggacaagaataatacaacaggaaagttgggtgaagaattaggtttactgagtccaatttgcagcagttgtcatgaaagtagactgactgactctaattttttcccttcacaaatgcaaaaaccctttaaggaacataatttagaatgctatagtaaagcagaaaaaaatgattactcccagtatgatatcccatgttaccagcatcgtgaagtaaataccaccattcttcaacagggatcttctgcattttcattgtcatcactgaaacccgaagaaacagcgagtgcttcccagaagtctgactccttgatttgggatgatataccattctctgaaagcctgaacaagtttctagcagttgttgaaagtgagattgctgtagctgagatagatactcagaatagaaagcagggtacagataacagcactgataaatgccacaaaaactacagcagattatcattgactcctctgagagatactagagccttaaatacgccgcctttcggcttaaggtcatcacaagcaatgagagaaaactcaaggagagaggccttcttttataacagtaagtctagttcaagttctcaaatccaaagagaatcacatccagacaaggcagcagcggctgtctctataggcagtaataggagcgatatctccaaggattttctaccagatacttgttcatcagctctgtttacatcttcagatgacatggaagcctccattagccaaaagaggactagtggggtcctgcaacaaaggaatgaaatttcgtgcaggctcagaacctcaataagtgactgttctgatctcagtaacagctgttttactggatgtgaagaaaaatcgcattcaggaacaaaagaaaaattggcaatacaaaactgttctaaaaaatacaatgatgtttctgatcttcacaaattagaaaataagcggagttatagatggccggaaaagcaagatgacaatttcacaattagccggaaactcacatatcctttagagacctttcgcgggagcccaaaaagcatatcaaaagaaaagccttataggcctagcaataataacttaacacaaagttcttctgctgatcatgaaggcagctacaatgcttctgctgatctttttgatgattttgctaaagataaggacactgaaacagaaattaccaaactaccgcaagatattttgttaccactggaagcatcttgcacagaaaattatcctataaatgagaactgcaaccatccttcacaaaaactctccttgcaaagcatatcaccctcagagtatcaaagaccaagctctcagtcagactcagaatgtgattttgaagaaagccaagaagactttgttccatgttcacagtcaactccagttgcaggcttccaccaaagaattcatggcttaaatggtgcttccaaaatactgccttccttctattcacatcttaatgctaattataaaaacacaaacatttctcctctaactggcaaatgtcaagccaccccaacctgcccaaagaatgtaaaaacatctacgcagaagctcaaccactgccctgctgctgagtgccttgaaaatgatatggatgaatgggtcccccctactactaaaaaagtatttatttcagatgtttgtggattgagagtcacgtgtttaagaaaatgccttgctgtccattattcccctgaccaaaaagagttaccaaggaagaaactgataaaagtcacacataaaaccaacaaataattaagaagttaaagactatattttgtaccaataattacaaaaccaaaagtgtcttaagtgtgattgtaaatgatcaggctgaaagtaggaaaagtccatttggggatggcctttcaggagtcaagtggaagtcatcttcccttttcataatacttcagtgtctgataaaaaaagtacttggtttactcaaagtatttccatataaagtcataggaatccagttcccagaaattttaagcaatggcaaatctatttggaaatttttgctttcactgatacagagagcagtctatattttgaacacttacagaaagtcattaatagaaaatggactgtactgtgtgctgttggatctttcaagattttcaccatggctttttttttcctccagaatactgtaatttagataactgagcacttttccttacattgactgtattaatatgttggttttgtatatttaaaagtatttgttaaaatatagacatacagaaataaagtctttacaaattaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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