2024-04-29 01:25:16, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NM_001024365 2026 bp mRNA linear ROD 11-NOV-2023 DEFINITION Rattus norvegicus carboxylesterase-like 1 (Cesl1), mRNA. ACCESSION NM_001024365 XM_576653 VERSION NM_001024365.1 KEYWORDS RefSeq; RefSeq Select. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 2026) AUTHORS Yan B, Yang D, Brady M and Parkinson A. TITLE Rat kidney carboxylesterase. Cloning, sequencing, cellular localization, and relationship to rat liver hydrolase JOURNAL J Biol Chem 269 (47), 29688-29696 (1994) PUBMED 7961958 COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence was derived from BC079129.1. On May 27, 2005 this sequence version replaced XM_576653.1. ##Evidence-Data-START## Transcript exon combination :: BC079129.1 [ECO:0000332] RNAseq introns :: mixed/partial sample support SAMD00155306, SAMD00155307 [ECO:0000350] ##Evidence-Data-END## ##RefSeq-Attributes-START## RefSeq Select criteria :: based on conservation, expression ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..2026 /organism="Rattus norvegicus" /mol_type="mRNA" /db_xref="taxon:10116" /chromosome="19" /map="19q11" gene 1..2026 /gene="Cesl1" /note="carboxylesterase-like 1" /db_xref="GeneID:501232" /db_xref="RGD:1565666" exon 1..82 /gene="Cesl1" /inference="alignment:Splign:2.1.0" misc_feature 65..67 /gene="Cesl1" /note="upstream in-frame stop codon" exon 83..179 /gene="Cesl1" /inference="alignment:Splign:2.1.0" CDS 128..1813 /gene="Cesl1" /EC_number="3.1.1.1" /note="liver carboxylesterase B-1; liver microsomal carboxylesterase" /codon_start=1 /product="liver carboxylesterase B-1 precursor" /protein_id="NP_001019536.1" /db_xref="GeneID:501232" /db_xref="RGD:1565666" /translation="
MCLRSLFLVSLATCVVCGNPSSPPVVDTMKGKVLGKYASLEGVTQSVAVFLGVPFAKPPLGSLRFAPPQPAEPWSFVKNTTTYPPMCSQDATKGQRMNDLLTNRKEKVHLQFSEDCLYLNIYTPADFTKDSRMPVMVWIHGGGLTQGGASTYDGQVLSAYENVVVVAIQYRLGIWGFFSTGDEHSRGNWGHLDQVAALHWVQDNIANFGGDPGSVTIFGESAGGFSVSVLVLSPLSKNLYHRAISESGVVLITELFTKDVRPAAKQIADMAGCKTTTSAIIVHCLRQKTEEELLEIMEKMNLIKLSSQRDTKESYHFLSTVIDDVVLPKDPKEILAEKNFNTVPYIVGINKQECGWLLPTMMRFVPPDVKLDKKMAIMLLEKFASIYGIPEDIIPVAIEKYRKGSDDPIKIRDGILAFIGDALFCIPSVMVSRDHRDAGAPTYVYEYQYYPSFSSPQRPKDVVGDHADDVYSVFGAPILRDGASEEEIKLSKMVMKFWANFARNGNPNGRGLPHWPQYDQKEEYLQIGATTQQSQGLKAEEVAFWTQLLAKRQPQPHHNEL"
sig_peptide 128..181 /gene="Cesl1" /note="/evidence=ECO:0000269|PubMed:8597091; propagated from UniProtKB/Swiss-Prot (Q63010.1)" mat_peptide 182..1810 /gene="Cesl1" /product="Liver carboxylesterase B-1. /id=PRO_0000008582" /note="propagated from UniProtKB/Swiss-Prot (Q63010.1)" misc_feature 191..1762 /gene="Cesl1" /note="Carboxylesterase family; Region: COesterase; pfam00135" /db_xref="CDD:395084" misc_feature 362..364 /gene="Cesl1" /note="N-linked (GlcNAc...) asparagine. /evidence=ECO:0000255; propagated from UniProtKB/Swiss-Prot (Q63010.1); glycosylation site" misc_feature order(548..556,785..793,800..802,1271..1273,1283..1285, 1382..1384,1526..1528,1535..1537) /gene="Cesl1" /note="substrate binding pocket [chemical binding]; other site" /db_xref="CDD:238191" misc_feature order(788..790,1184..1186,1523..1525) /gene="Cesl1" /note="catalytic triad [active]" /db_xref="CDD:238191" misc_feature 1799..1810 /gene="Cesl1" /note="propagated from UniProtKB/Swiss-Prot (Q63010.1); Region: Prevents secretion from ER. /evidence=ECO:0000255|PROSITE-ProRule:PRU10138" exon 180..384 /gene="Cesl1" /inference="alignment:Splign:2.1.0" exon 385..529 /gene="Cesl1" /inference="alignment:Splign:2.1.0" exon 530..663 /gene="Cesl1" /inference="alignment:Splign:2.1.0" exon 664..817 /gene="Cesl1" /inference="alignment:Splign:2.1.0" exon 818..922 /gene="Cesl1" /inference="alignment:Splign:2.1.0" exon 923..1027 /gene="Cesl1" /inference="alignment:Splign:2.1.0" exon 1028..1066 /gene="Cesl1" /inference="alignment:Splign:2.1.0" exon 1067..1207 /gene="Cesl1" /inference="alignment:Splign:2.1.0" exon 1208..1288 /gene="Cesl1" /inference="alignment:Splign:2.1.0" exon 1289..1436 /gene="Cesl1" /inference="alignment:Splign:2.1.0" exon 1437..1568 /gene="Cesl1" /inference="alignment:Splign:2.1.0" exon 1569..1641 /gene="Cesl1" /inference="alignment:Splign:2.1.0" exon 1642..2001 /gene="Cesl1" /inference="alignment:Splign:2.1.0" ORIGIN
caactgtgcagcccggagagtctccaaaacttttcagtctgtaataagaagccccccacctcactaaagctttgcactgcctaccagagtcagagactctattgactggagtatctgcccacgcaagatgtgcctcaggtccctgttcctggtgtccctagcaacctgtgtggtttgtggaaacccctcttcaccacctgtggtggacaccatgaaaggcaaggtcctggggaagtatgccagtttagaaggagtcacacagtctgtagccgtcttcctgggagtcccttttgccaagccccctcttggatctctgaggtttgctccaccacagcctgcagagccctggagcttcgtgaagaacaccaccacctatccacctatgtgctcccaagatgcaacaaaagggcagaggatgaatgatctcctaaccaacagaaaggagaaagtccatctccagttttctgaagattgtctctacctgaatatttacactcctgcagactttacaaaggatagcaggatgccagtgatggtgtggatccatggaggtggactaacacagggcggggcatcaacctatgatggccaggtcctctctgcctatgaaaacgtggtggtagtggccattcaatatcgcctgggcatctggggattcttcagcacaggggatgaacacagcaggggaaactggggtcatttggaccaagtagctgcgctgcactgggtccaggacaacattgccaactttgggggtgacccaggctctgtgaccatctttggagagtcagcaggaggtttcagtgtctctgttcttgtgttgtccccactgtccaagaacctctaccacagggccatttctgagagtggggtggtcctcattactgaattgtttactaaggatgttaggccagccgctaagcaaattgctgatatggctggatgtaaaaccaccacctctgccatcattgttcactgcctgcgtcaaaagacagaagaggagctcttagagatcatggaaaaaatgaatctgattaaactcagttcacaaagggataccaaagagagctaccactttttgtcaactgtgattgacgatgtggtgctgccaaaggacccaaaagagatcctggctgagaagaacttcaacaccgtgccctacattgtgggaatcaacaagcaagagtgtggctggcttctgccaacgatgatgagatttgtaccacctgatgtaaaattggacaagaagatggccattatgctcctggagaaatttgcttccatatatggtataccagaggatattattccagttgctattgagaagtacagaaaaggtagtgatgaccccatcaagatcagagatggaatccttgcctttattggggatgcgttattttgtatcccatcagtgatggtgtcccgtgaccacagagatgctggagctcccacctacgtgtatgagtatcaatactacccaagcttctcatcaccccaaagacccaaggatgtagtaggagaccatgcagatgatgtctactctgtctttggtgccccaattttaagagatggtgcctcagaagaggagatcaagctcagcaagatggtgatgaaattttgggccaactttgctcggaatgggaaccctaatggccgagggctacctcattggccacagtatgaccagaaagaagaatatctgcagattggtgccaccacccagcaatcgcagggactgaaagcagaggaagtggctttttggacacagttactggctaagagacaacctcagccccaccacaatgagctgtgaatgcaagtctctgtcagcttcagaacaagcaagccaagatattgttcttccagtaaagatgtttgtaaatgaaagatggatctggaggatcctgaagaattttgtaatagagacagggagaacccaggaaagagaaatatttgtacttggcatcaatttagagaataaatgacatttttacagttaaaaaaaaaaaaaaaaaaaaaaaaaaaa
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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