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2024-03-29 17:05:21, GGRNA : RefSeq release 222 (Jan, 2024)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Rattus norvegicus crystallin, gamma A (Cryga), mRNA. (618 bp)
JOURNAL Mutat Res 92 (1-2), 181-192 (1982) PUBMED 7088001 acactcaacactgaccatttgctgtcaacaacgatgggaaagatcaccttctacgaggaccgaggcttccagggccgctgctatgagtgcagcagcgactgccccaacctgcagacctacttcagccgctgcaactccatccgcgtggacagtggctgctggatgctctatgagcgacccaactaccagggctaccagtacttcctgcgacgcggggactaccctgactaccagcagtggatgggtttcagcgactccattcgctcctgccgttccattccctataccagctctcacaggataaggctgtacgagagagatgactaccggggccttgtgtctgagctcacggaagactgttcctgcatccacgaccgcttccgcctcaacgagatctactccatgcatgtgctagaaggcagctgggtcctctatgagatgcccaactaccgaggccgccagtacctgctcaggcctggagactacaggcgctaccacgactggggcgccatggatgccaaagtcggctctctgagacgggt...
position 214
NM_001080936.2 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
Rattus norvegicus crystallin, gamma D (Crygd), mRNA. (634 bp)
family JOURNAL J Mol Biol 189 (1), 37-46 (1986) PUBMED 3783678 acactcaactgaaacctcccatccgacccgcaaacaacagccatggggaagatcaccttctatgaggaccgcggcttccagggccgccactatgagtgcagcacagaccactccaacctgcagccctacttcagccgctgcaactctgtgcgcgtggacagtggctgctggatgctctatgagcagcccaacttcacaggctgccagtacttccttcgtcgcggggactaccctgactaccagcagtggatgggtttcagcgactctgtccgctcctgccgcctcatcccccacgccggctcccacaggatcagactgtacgagagggaagattacagaggccagatggtagagttcactgaggactgcccctctctccaggaccgattccacttcaatgagatctactccctcaatgtgctggagggctgctgggtcctctatgagatgaccaactacagggggcgacagtacctgctgaggcccggggagtataggcgctaccacgactggggcgccatgaatgccagggttggc...
position 223
Synonym: Cryg4; Len
NM_033095.2 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
Rattus norvegicus crystallin, gamma C (Crygc), transcript variant 1, mRNA. (617 bp)
of a primordial gene JOURNAL Proc Natl Acad Sci U S A 79 (22), 6876-6880 (1982) PUBMED 6294661 gccagccatggggaagatcaccttctacgaggaccgaggcttccagggccgctgctatgagtgcagcagcgactgccccaacctgcagacctacttcagccgctgcaactccgtccgcgtggacagtggctgctggatgctctatgagcgacccaactaccagggccaccagtacttcctgcgacgcggggactaccctgactaccagcagtggatgggtttcagcgactccattcgctcctgccgcctcatcccccatcagacaggttcccacaggatgcgtctgtatgagaaagaagatcacaaaggcgtcatgatggagctgagtgaagactgctcctgcatccaggaccgcttccacctcagtgaggtgcgctcgctgcacgtgctagagggctgctgggtcctctatgagatgtctaactaccgaggccggcagtatctgctgaggcctcaagagtaccggcgctaccacgactggggcgctgtagatgctaaggcaggc...
position 188
Synonym: Cryg; Cryg3; Len
NM_033483.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
Rattus norvegicus crystallin, gamma C (Crygc), transcript variant 2, mRNA. (618 bp)
gene JOURNAL Proc Natl Acad Sci U S A 79 (22), 6876-6880 (1982) PUBMED 6294661 actgaactcaccacgggtcagccagccatggggaagatcaccttctacgaggaccgaggcttccagggccgctgctatgagtgcagcagcgactgccccaacctgcagacctacttcagccgctgcaactccatccgcgtggacagtggctgctggatgctctatgagcgccccaactaccagggccaccagtacttcctgcgacgcggggactaccctgactaccagcagtggatgggtttcagcgactccattcgctcctgccgcctcatcccccatacaggttcccacaggatgcgtctgtatgagaaagaagatcacaaaggcgtcatgatggagctgagtgaagactgctcctgcatccaggaccgcttccacctcagtgaggtgcgctcgctgcacgtgctagagggctgctgggtcctctatgagatgcctaactaccgaggccggcagtatctgctgaggcctcaagagtaccggcgctaccacgactggggcgctgtagatgctaaggcagg...
position 208
Synonym: Cryg; Cryg3; Len
NM_001081660.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
Rattus norvegicus crystallin, gamma B (Crygb), mRNA. (626 bp)
gene family JOURNAL J Mol Biol 189 (1), 37-46 (1986) PUBMED 3783678 acagctcccagggcatctcttactatcagcgagatgggaaagatcaccttcttcgaggaccgaggcttccagggccgctgctatgagtgcagcagcgactgccccaacctgcagacctacttcagccgctgcaactccgtccgcgtggacagtggctgctggatgctctatgagcgacccaactaccagggccaccagtacttcctgcgacgcggggactaccctgactaccagcagtggatgggtttcagcgactccattcgctcctgccgcctcatcccccaacactcgggcacttacagaatgaggatctacgaaagagatgacttcagaggacaaatgtcagagatcacagacgactgtctctctcttcaggatcgcttccacctcagcgagattcactccctcaatgtaatggagggctgctgggtcctctatgagatgcctagctacagagggcgccagtacctgctgaggccgggagagtacaggagatatcttgactggggggctgcaaacgccaaagttggct...
position 214
Synonym: Cryg2; Len
NM_001109875.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)
Rattus norvegicus crystallin, gamma E (Cryge), mRNA. (633 bp)
Natl Acad Sci U S A 79 (22), 6876-6880 (1982) PUBMED 6294661 acaaccaacagcaccatcccatccgacctgcaaacaacagccatggggaagatcaccttctatgaggaccgcggcttccagggccgccactatgagtgcagcacagaccactccaacctgcagccctacttcagccgctgcaactctgtgcgcgtggacagtggctgctggatgctctatgagcagcccaacttcacaggctgccagtatttccttcgtcgcggggactaccctgactaccagcagtggatgggtttcagcgactctgtccgctcctgccgcctcatcccccactccagctctcacagaatcaggatctacgagcgagaggactacagaggccagatggtggagatcacagacgactgcccccacctgcaggaccgcttccacttcagtgacttccactctttccacgtgatggagggctactgggtcctctatgagatgcccaactaccgggggcggcagtacctgctgaggcctggagaatacaggcgctaccacgactggggcgccatgaatgccagggtaggctc...
position 223
Synonym: Cryg5; Len
NM_173289.1 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)

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Redirect URI : http://ggrna.dbcls.jp/rn/seq%3aGGGGACTACCCTGACTACCAGCAGT
lang : en | div : | spe : rn | query_string : seq:GGGGACTACCCTGACTACCAGCAGT | format : html | download :

0.000 | 0.000 | search_start;
0.085 | 0.085 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:GGGGACTACCCTGACTACCAGCAGT)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.127 | 0.042 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=(nt:GGGGACTACCCTGACTACCAGCAGT)?source=Rattus norvegicus (Norway rat)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.128 | 0.001 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]