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2021-01-24 05:03:41, GGRNA : RefSeq release 203 (Nov, 2020)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Rattus norvegicus neuronal differentiation 1 (Neurod1), mRNA. (1834 bp)
attgctgcaaagtgcaaatactcgaagcttcaagggatatatgtatttattgtcgttactgcctttggaagaaacaggggatcaaagttcctgttcaccttatctattgttttctatagctcttctattttaaaaaataatagtacagtaaagtaaaaaaggaaaatgtgtaccacgaatttcgtgtagctgtattcagatcgtattaattatctgatcgggataaaaaaatcaagcaataattaggatctatgcaatttttaaactagtaatgggccaattaaagtatatataaatatatatttttcaaccagcattttactacttgttacctttcccatgccgaattattttgttgtgattttgtacagaatttttaatgactttttataacgtggatttcctattttaaaaccatgcagcttcatcaatttttatacatatcagaaaagtagaattatatctaatttatacaaaaataatttaactaatttaaaccagcagaaaagtgcttagaaagttattgcgttgccttagcacttctttcttctctaattgtaaaaaaaaaaaaaaaaaaaaaaaaag
position 1305 1327 1332 1414 1418 1423 1428 1551 1555 1561 1571 1658 1740 1770 1775 1781
NM_019218.2 - Rattus norvegicus (Norway rat) - NCBI - UCSC - RefEx(expression)

Data Export:

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Debug Info:

Redirect URI : http://ggrna.dbcls.jp/rn/D82074_g_at
lang : en | div : | spe : rn | query_string : D82074_g_at | format : html | download :

0.000 | 0.000 | search_start;
0.096 | 0.096 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TTCAACCAGCATTTTACTACTTGTT)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.106 | 0.010 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TTATTGCGTTGCCTTAGCACTTCTT)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.116 | 0.010 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TTACTGCCTTTGGAAGAAACAGGGG)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.128 | 0.011 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TTAAAACCATGCAGCTTCATCAATT)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.138 | 0.010 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TGTACCACGAATTTCGTGTAGCTGT)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.148 | 0.010 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:GGGATCAAAGTTCCTGTTCACCTTA)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.158 | 0.011 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:GCGTTGCCTTAGCACTTCTTTCTTC)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.169 | 0.010 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:CTACTTGTTACCTTTCCCATGCCGA)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.179 | 0.010 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:CCTTAGCACTTCTTTCTTCTCTAAT)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.188 | 0.009 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:CAGCATTTTACTACTTGTTACCTTT)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.197 | 0.009 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:CACGAATTTCGTGTAGCTGTATTCA)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.206 | 0.009 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:CAAAGTTCCTGTTCACCTTATCTAT)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.214 | 0.008 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:ATTTTTCAACCAGCATTTTACTACT)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.225 | 0.011 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:ATTTCGTGTAGCTGTATTCAGATCG)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.235 | 0.010 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:ATTTAAACCAGCAGAAAAGTGCTTA)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.243 | 0.009 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:AATGTGTACCACGAATTTCGTGTAG)?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.267 | 0.024 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=(nt:TTCAACCAGCATTTTACTACTTGTT)%26(nt:TTATTGCGTTGCCTTAGCACTTCTT)%26(nt:TTACTGCCTTTGGAAGAAACAGGGG)%26(nt:TTAAAACCATGCAGCTTCATCAATT)%26(nt:TGTACCACGAATTTCGTGTAGCTGT)%26(nt:GGGATCAAAGTTCCTGTTCACCTTA)%26(nt:GCGTTGCCTTAGCACTTCTTTCTTC)%26(nt:CTACTTGTTACCTTTCCCATGCCGA)%26(nt:CCTTAGCACTTCTTTCTTCTCTAAT)%26(nt:CAGCATTTTACTACTTGTTACCTTT)%26(nt:CACGAATTTCGTGTAGCTGTATTCA)%26(nt:CAAAGTTCCTGTTCACCTTATCTAT)%26(nt:ATTTTTCAACCAGCATTTTACTACT)%26(nt:ATTTCGTGTAGCTGTATTCAGATCG)%26(nt:ATTTAAACCAGCAGAAAAGTGCTTA)%26(nt:AATGTGTACCACGAATTTCGTGTAG)?source=Rattus norvegicus (Norway rat)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.268 | 0.001 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]