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Previous release (v1)
2026-06-21 13:51:41, GGRNA : RefSeq release 233 (Jan, 2026)
Summary:
Results:
Matches are highlighted with green background.
Overlapping matches are dark colored.
Eif2c2" /note="protein argonaute; Provisional; Region: PLN03202" /db_xref="CDD:215631" misc_feature 1080..1097 /gene="Ago2" /gene_synonym="eIF2C 2; Eif2c2" /note="propagated from UniProtKB/Swiss-Prot (Q9QZ81.2); Region: Interaction with guide RNA. /evidence=ECO:0000250" misc_feature 1308..1310 /gene="Ago2" /gene_synonym="eIF2C 2; Eif2c2" /note="Phosphoserine. /evidence=ECO:0000250|UniProtKB:Q9UKV8; propagated from UniProtKB/Swiss-Prot (Q9QZ81.2); phosphorylation site" misc_feature 1323..2600 /gene="Ago2" /gene_synonym="eIF2C 2; Eif2c2" /note="PIWI domain, Argonaute-like subfamily. Argonaute is...
misc_feature 261..485 /gene="Ago1" /gene_synonym="Eif2c1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 513..665 /gene="Ago1" /gene_synonym="Eif2c1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 666..1028 /gene="Ago1" /gene_synonym="Eif2c1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and...
misc_feature 448..702 /gene="Ago4" /gene_synonym="Eif2c4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 733..885 /gene="Ago4" /gene_synonym="Eif2c4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 886..1248 /gene="Ago4" /gene_synonym="Eif2c4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and...
misc_feature 212..601 /gene="Ago4" /gene_synonym="Eif2c4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 632..784 /gene="Ago4" /gene_synonym="Eif2c4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 785..1135 /gene="Ago4" /gene_synonym="Eif2c4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and...
misc_feature 298..690 /gene="Ago1" /gene_synonym="Eif2c1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 718..870 /gene="Ago1" /gene_synonym="Eif2c1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 871..1233 /gene="Ago1" /gene_synonym="Eif2c1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and...
misc_feature 221..373 /gene="Ago1" /gene_synonym="Eif2c1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 374..736 /gene="Ago1" /gene_synonym="Eif2c1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order...
misc_feature 279..503 /gene="Ago2" /gene_synonym="eIF2C 2; Eif2c2" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 531..683 /gene="Ago2" /gene_synonym="eIF2C 2; Eif2c2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 684..1046 /gene="Ago2" /gene_synonym="eIF2C 2; Eif2c2" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the...
misc_feature 228..380 /gene="Ago1" /gene_synonym="Eif2c1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 381..743 /gene="Ago1" /gene_synonym="Eif2c1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order...
misc_feature 177..518 /gene="Ago1" /gene_synonym="Eif2c1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(312..314,357..359,399..401,411..413,465..467, 486..488,492..494) /gene="Ago1" /gene_synonym="Eif2c1" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_...
misc_feature 174..515 /gene="Ago3" /gene_synonym="Eif2c3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(309..311,354..356,396..398,408..410,462..464, 483..485,489..491) /gene="Ago3" /gene_synonym="Eif2c3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239212" misc_...
misc_feature 6283..6624 /gene="Ago3" /gene_synonym="Eif2c3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(6418..6420,6463..6465,6505..6507,6517..6519, 6571..6573,6592..6594,6598..6600) /gene="Ago3" /gene_synonym="Eif2c3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD...
misc_feature 6319..6660 /gene="Ago3" /gene_synonym="Eif2c3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and Zwille; Region: PAZ_argonaute_like; cd02846" /db_xref="CDD:239212" misc_feature order(6454..6456,6499..6501,6541..6543,6553..6555, 6607..6609,6628..6630,6634..6636) /gene="Ago3" /gene_synonym="Eif2c3" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD...
LOCUS XM_063287444 5008 bp mRNA linear ROD 22-FEB-2024 DEFINITION PREDICTED: Rattus norvegicus argonaute RISC component 4 (Ago4), transcript variant X5, mRNA. ACCESSION XM_063287444 VERSION XM_063287444.1 DBLINK BioProject: PRJNA1074393 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM...misc_feature 151..1227 /gene="Ago4" /gene_synonym="Eif2c4" /note="PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-terminal portion of Argonaute and consists of two subdomains, one of...
LOCUS XR_005504456 2148 bp RNA linear ROD 22-FEB-2024 DEFINITION PREDICTED: Rattus norvegicus argonaute RISC catalytic component 3 (Ago3), transcript variant X4, misc_RNA. ACCESSION XR_005504456 VERSION XR_005504456.2 DBLINK BioProject: PRJNA1074393 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is...
LOCUS XM_063287443 1535 bp mRNA linear ROD 22-FEB-2024 DEFINITION PREDICTED: Rattus norvegicus argonaute RISC component 4 (Ago4), transcript variant X4, mRNA. ACCESSION XM_063287443 VERSION XM_063287443.1 DBLINK BioProject: PRJNA1074393 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from...
misc_feature 459..848 /gene="Ago4" /gene_synonym="Eif2c4" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 879..1031 /gene="Ago4" /gene_synonym="Eif2c4" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1032..1394 /gene="Ago4" /gene_synonym="Eif2c4" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and...
LOCUS XM_063287442 5408 bp mRNA linear ROD 22-FEB-2024 DEFINITION PREDICTED: Rattus norvegicus argonaute RISC component 4 (Ago4), transcript variant X3, mRNA. ACCESSION XM_063287442 VERSION XM_063287442.1 DBLINK BioProject: PRJNA1074393 KEYWORDS RefSeq. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from...
LOCUS XM_039110020 16113 bp mRNA linear ROD 22-FEB-2024 DEFINITION PREDICTED: Rattus norvegicus argonaute RISC catalytic component 3 (Ago3), transcript variant X5, mRNA. ACCESSION XM_039110020 VERSION XM_039110020.2 DBLINK BioProject: PRJNA1074393 KEYWORDS RefSeq. SOURCE Rattus norvegicus...note="PAZ domain; Region: PAZ; pfam02170" /db_xref="CDD:460472" misc_feature 1859..3136 /gene="Ago3" /gene_synonym="Eif2c3" /note="PIWI domain, Argonaute-like subfamily. Argonaute is the central component of the RNA-induced silencing complex (RISC) and related complexes. The PIWI domain is the C-...
misc_feature 468..752 /gene="Ago3" /gene_synonym="Eif2c3" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 780..932 /gene="Ago3" /gene_synonym="Eif2c3" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 933..1295 /gene="Ago3" /gene_synonym="Eif2c3" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and...
misc_feature 303..695 /gene="Ago1" /gene_synonym="Eif2c1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 723..875 /gene="Ago1" /gene_synonym="Eif2c1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 876..1238 /gene="Ago1" /gene_synonym="Eif2c1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and...
misc_feature 303..695 /gene="Ago1" /gene_synonym="Eif2c1" /note="N-terminal domain of argonaute; Region: ArgoN; pfam16486" /db_xref="CDD:465134" misc_feature 723..875 /gene="Ago1" /gene_synonym="Eif2c1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 876..1238 /gene="Ago1" /gene_synonym="Eif2c1" /note="PAZ domain, argonaute_like subfamily. Argonaute is part of the RNA-induced silencing complex (RISC), and is an endonuclease that plays a key role in the RNA interference pathway. The PAZ domain has been named after the proteins Piwi,Argonaut, and...
db_xref="GeneID:102466617" /db_xref="miRBase:MI0021533" /db_xref="RGD:7489047" ORIGIN // REFERENCE 1 (bases 1 to 64) AUTHORS Polikepahad,S. and Corry,D.B. TITLE Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2 JOURNAL Nucleic Acids Res 41 (2), 1164-1177 (2013) PUBMED 23185045 REFERENCE 2 (bases 1 to 64) AUTHORS Clokie,S.J., Lau,P., Kim,H.H., Coon,S.L. and Klein,D.C. TITLE MicroRNAs in the pineal gland: miR-483 regulates melatonin synthesis by targeting arylalkylamine N-acetyltransferase...
and preimplantation embryos JOURNAL Nucleic Acids Res 41 (10), 5483-5493 (2013) PUBMED 23571754 REFERENCE 4 (bases 1 to 85) AUTHORS Polikepahad,S. and Corry,D.B. TITLE Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2 JOURNAL Nucleic Acids Res 41 (2), 1164-1177 (2013) PUBMED 23185045 REFERENCE 5 (bases 1 to 85) AUTHORS Kumarswamy,R., Lyon,A.R., Volkmann,I., Mills,A.M., Bretthauer,J., Pahuja,A., Geers-Knorr,C., Kraft,T., Hajjar,R.J., Macleod,K.T., Harding,S.E. and Thum,T. TITLE SERCA2a gene...
neurological recovery. Erratum:[PLoS One. 2014;9(7):e104465] Publication Status: Online-Only REFERENCE 3 (bases 1 to 95) AUTHORS Polikepahad,S. and Corry,D.B. TITLE Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2 JOURNAL Nucleic Acids Res 41 (2), 1164-1177 (2013) PUBMED 23185045 REFERENCE 4 (bases 1 to 95) AUTHORS Repetto,E., Briata,P., Kuziner,N., Harfe,B.D., McManus,M.T., Gherzi,R., Rosenfeld,M.G. and Trabucchi,M. TITLE Let-7b/c enhance the stability of a tissue-specific mRNA during...
misc_feature 2193 /gene="Tnrc6b" /gene_synonym="Cbl27" /note="serine-rich protein; Region: ser_rich_anae_1; NF033849" /db_xref="CDD:468206" misc_feature 3250..3585 /gene="Tnrc6b" /gene_synonym="Cbl27" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 4369..5205 /gene="Tnrc6b" /gene_synonym="Cbl27" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 5209..5457 /gene="Tnrc6b" /gene_synonym="Cbl27" /note="RNA recognition motif (RRM) found in vertebrate trinucleotide repeat-containing gene 6B protein...
and Pitx3 JOURNAL Development 140 (16), 3373-3384 (2013) PUBMED 23863478 REMARK Erratum:[Development. 2013 Oct;140(19):4116] REFERENCE 5 (bases 1 to 1234) AUTHORS Garcia-Perez,D., Saez-Belmonte,F., Laorden,M.L., Nunez,C. and Milanes,M.V. TITLE Morphine administration modulates expression of Argonaute 2 and dopamine-related transcription factors involved in midbrain dopaminergic neurons function JOURNAL Br J Pharmacol 168 (8), 1889-1901 (2013) PUBMED 23215787 REFERENCE 6 (bases 1 to 1234) AUTHORS Lebel,M., Gauthier,Y., Moreau,A. and Drouin,J. TITLE Pitx3 activates mouse tyrosine hydroxylase...
JOURNAL PLoS One 8 (4), e62786 (2013) PUBMED 23646144 REMARK Publication Status: Online-Only REFERENCE 5 (bases 1 to 70) AUTHORS Polikepahad,S. and Corry,D.B. TITLE Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2 JOURNAL Nucleic Acids Res 41 (2), 1164-1177 (2013) PUBMED 23185045 REFERENCE 6 (bases 1 to 70) AUTHORS Linsen,S.E., de Wit,E., de Bruijn,E. and Cuppen,E. TITLE Small RNA expression and strain specificity in the rat JOURNAL BMC Genomics 11, 249 (2010) PUBMED 20403161 REMARK...
antagonizes its activity in muscle cell-specific alternative splicing JOURNAL J Cell Biol 193 (3), 509-520 (2011) PUBMED 21518792 REFERENCE 5 (bases 1 to 1444) AUTHORS Lin,J.C. and Tarn,W.Y. TITLE RNA-binding motif protein 4 translocates to cytoplasmic granules and suppresses translation via argonaute2 during muscle cell differentiation JOURNAL J Biol Chem 284 (50), 34658-34665 (2009) PUBMED 19801630 REFERENCE 6 (bases 1 to 1444) AUTHORS Kar,A., Havlioglu,N., Tarn,W.Y. and Wu,J.Y. TITLE RBM4 interacts with an intronic element and stimulates tau exon 10 inclusion JOURNAL J Biol Chem...
Zampa,F., Sumer,S. and Schratt,G. TITLE A large-scale functional screen identifies Nova1 and Ncoa3 as regulators of neuronal miRNA function JOURNAL EMBO J 34 (17), 2237-2254 (2015) PUBMED 26105073 REMARK GeneRIF: Nova1 and Ncoa3 stimulate miRNA function by different mechanisms that converge on Argonaute (Ago) proteins, core components of the miRNA-induced silencing complex (miRISC). REFERENCE 6 (bases 1 to 7096) AUTHORS Eom,T., Zhang,C., Wang,H., Lay,K., Fak,J., Noebels,J.L. and Darnell,R.B. TITLE NOVA-dependent regulation of cryptic NMD exons controls synaptic protein levels after seizure...
misc_feature 6419..6748 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 6755..6868 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 6992..7672 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 7697..8461 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="TNRC6-PABC binding...
misc_feature 423..752 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 759..872 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 1023..1700 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 1725..2489 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="TNRC6-PABC binding domain...
misc_feature 741..1070 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 1077..1190 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 1341..2018 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 2043..2807 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="TNRC6-PABC binding...
misc_feature 845..1174 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 1181..1294 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 1445..2122 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 2147..2911 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="TNRC6-PABC binding...
Zampa,F., Sumer,S. and Schratt,G. TITLE A large-scale functional screen identifies Nova1 and Ncoa3 as regulators of neuronal miRNA function JOURNAL EMBO J 34 (17), 2237-2254 (2015) PUBMED 26105073 REMARK GeneRIF: Nova1 and Ncoa3 stimulate miRNA function by different mechanisms that converge on Argonaute (Ago) proteins, core components of the miRNA-induced silencing complex (miRISC). REFERENCE 6 (bases 1 to 6922) AUTHORS Eom,T., Zhang,C., Wang,H., Lay,K., Fak,J., Noebels,J.L. and Darnell,R.B. TITLE NOVA-dependent regulation of cryptic NMD exons controls synaptic protein levels after seizure...
misc_feature 6420..6749 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 6756..6869 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 7020..7697 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 7722..8486 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="TNRC6-PABC binding...
misc_feature 634..963 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 970..1083 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="UBA domain found in trinucleotide repeat-containing gene 6C protein (TNRC6C) and similar proteins; Region: UBA_TNR6C; cd14283" /db_xref="CDD:270469" misc_feature 1234..1911 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 1936..2700 /gene="Tnrc6c" /gene_synonym="RGD1310027" /note="TNRC6-PABC binding domain...
misc_feature 369..647 /gene="Piwil1" /note="GAGE protein; Region: GAGE; pfam05831" /db_xref="CDD:461753" misc_feature 1011..1154 /gene="Piwil1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1158..1574 /gene="Piwil1" /note="This domain is named PAZ after the proteins Piwi Argonaut and Zwille; Region: PAZ; smart00949" /db_xref="CDD:198017" misc_feature order(1290..1292,1329..1331,1353..1355,1365..1367, 1419..1421,1467..1469,1473..1475) /gene="Piwil1" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239211"...
misc_feature 847..1125 /gene="Piwil1" /note="GAGE protein; Region: GAGE; pfam05831" /db_xref="CDD:461753" misc_feature 1489..1632 /gene="Piwil1" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1636..2052 /gene="Piwil1" /note="This domain is named PAZ after the proteins Piwi Argonaut and Zwille; Region: PAZ; smart00949" /db_xref="CDD:198017" misc_feature order(1768..1770,1807..1809,1831..1833,1843..1845, 1897..1899,1945..1947,1951..1953) /gene="Piwil1" /note="nucleic acid-binding interface [nucleotide binding]; other site" /db_xref="CDD:239211"...
Zampa,F., Sumer,S. and Schratt,G. TITLE A large-scale functional screen identifies Nova1 and Ncoa3 as regulators of neuronal miRNA function JOURNAL EMBO J 34 (17), 2237-2254 (2015) PUBMED 26105073 REMARK GeneRIF: Nova1 and Ncoa3 stimulate miRNA function by different mechanisms that converge on Argonaute (Ago) proteins, core components of the miRNA-induced silencing complex (miRISC). REFERENCE 6 (bases 1 to 6994) AUTHORS Eom,T., Zhang,C., Wang,H., Lay,K., Fak,J., Noebels,J.L. and Darnell,R.B. TITLE NOVA-dependent regulation of cryptic NMD exons controls synaptic protein levels after seizure...
misc_feature 1244..1387 /gene="Piwil2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1388..1741 /gene="Piwil2" /note="PAZ domain, Piwi_like subfamily. In multi-cellular organisms, the Piwi protein appears to be essential for the maintenance of germline stem cells. In the Drosophila male germline, Piwi was shown to be involved in the silencing of retrotransposons in the...; Region: PAZ_piwi_like; cd02845" /db_xref="CDD:239211" misc_feature order(1520..1522,1559..1561,1583..1585,1595..1597, 1649..1651,1700..1702,1706..1708) /gene="Piwil2" /note="...
misc_feature 1161..1304 /gene="Piwil2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1305..1658 /gene="Piwil2" /note="PAZ domain, Piwi_like subfamily. In multi-cellular organisms, the Piwi protein appears to be essential for the maintenance of germline stem cells. In the Drosophila male germline, Piwi was shown to be involved in the silencing of retrotransposons in the...; Region: PAZ_piwi_like; cd02845" /db_xref="CDD:239211" misc_feature order(1437..1439,1476..1478,1500..1502,1512..1514, 1566..1568,1617..1619,1623..1625) /gene="Piwil2" /note="...
note="serine-rich protein; Region: ser_rich_anae_1; NF033849" /db_xref="CDD:468206" misc_feature 2774 /gene="Tnrc6a" /gene_synonym="Tnrc6" /note="serine-rich protein; Region: ser_rich_anae_1; NF033849" /db_xref="CDD:468206" misc_feature 3387..>3620 /gene="Tnrc6a" /gene_synonym="Tnrc6" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 4047..4604 /gene="Tnrc6a" /gene_synonym="Tnrc6" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4677..5462 /gene="Tnrc6a" /gene_synonym="Tnrc6" /note="TNRC6-PABC binding domain; Region...
misc_feature 1161..1304 /gene="Piwil2" /note="Argonaute linker 1 domain; Region: ArgoL1; pfam08699" /db_xref="CDD:462567" misc_feature 1305..1658 /gene="Piwil2" /note="PAZ domain, Piwi_like subfamily. In multi-cellular organisms, the Piwi protein appears to be essential for the maintenance of germline stem cells. In the Drosophila male germline, Piwi was shown to be involved in the silencing of retrotransposons in the...; Region: PAZ_piwi_like; cd02845" /db_xref="CDD:239211" misc_feature order(1437..1439,1476..1478,1500..1502,1512..1514, 1566..1568,1617..1619,1623..1625) /gene="Piwil2" /note="...
and adipocyte differentiation JOURNAL J Clin Invest 125 (4), 1509-1522 (2015) PUBMED 25751060 REFERENCE 3 (bases 1 to 97) AUTHORS Polikepahad,S. and Corry,D.B. TITLE Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2 JOURNAL Nucleic Acids Res 41 (2), 1164-1177 (2013) PUBMED 23185045 REFERENCE 4 (bases 1 to 97) AUTHORS Pogribny,I.P., Starlard-Davenport,A., Tryndyak,V.P., Han,T., Ross,S.A., Rusyn,I. and Beland,F.A. TITLE Difference in expression of hepatic microRNAs miR-29c, miR-34a, miR-155,...
misc_feature 2839 /gene="Tnrc6b" /gene_synonym="Cbl27" /note="serine-rich protein; Region: ser_rich_anae_1; NF033849" /db_xref="CDD:468206" misc_feature 3716..4072 /gene="Tnrc6b" /gene_synonym="Cbl27" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 4856..5692 /gene="Tnrc6b" /gene_synonym="Cbl27" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 5696..5944 /gene="Tnrc6b" /gene_synonym="Cbl27" /note="RNA recognition motif (RRM) found in vertebrate trinucleotide repeat-containing gene 6B protein...
misc_feature 1965 /gene="Tnrc6b" /gene_synonym="Cbl27" /note="serine-rich protein; Region: ser_rich_anae_1; NF033849" /db_xref="CDD:468206" misc_feature 3022..3357 /gene="Tnrc6b" /gene_synonym="Cbl27" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 4141..4800 /gene="Tnrc6b" /gene_synonym="Cbl27" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 4804..5052 /gene="Tnrc6b" /gene_synonym="Cbl27" /note="RNA recognition motif (RRM) found in vertebrate trinucleotide repeat-containing gene 6B protein...
misc_feature 1965 /gene="Tnrc6b" /gene_synonym="Cbl27" /note="serine-rich protein; Region: ser_rich_anae_1; NF033849" /db_xref="CDD:468206" misc_feature 2842..3198 /gene="Tnrc6b" /gene_synonym="Cbl27" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3982..4818 /gene="Tnrc6b" /gene_synonym="Cbl27" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 4822..5070 /gene="Tnrc6b" /gene_synonym="Cbl27" /note="RNA recognition motif (RRM) found in vertebrate trinucleotide repeat-containing gene 6B protein...
misc_feature 2709 /gene="Tnrc6a" /gene_synonym="Tnrc6" /note="serine-rich protein; Region: ser_rich_anae_1; NF033849" /db_xref="CDD:468206" misc_feature 3322..>3555 /gene="Tnrc6a" /gene_synonym="Tnrc6" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3982..4539 /gene="Tnrc6a" /gene_synonym="Tnrc6" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4612..5397 /gene="Tnrc6a" /gene_synonym="Tnrc6" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 5419..5694 /gene="...
misc_feature 2526 /gene="Tnrc6a" /gene_synonym="Tnrc6" /note="serine-rich protein; Region: ser_rich_anae_1; NF033849" /db_xref="CDD:468206" misc_feature 3139..>3372 /gene="Tnrc6a" /gene_synonym="Tnrc6" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 3799..4356 /gene="Tnrc6a" /gene_synonym="Tnrc6" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 4429..5214 /gene="Tnrc6a" /gene_synonym="Tnrc6" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 5236..5511 /gene="...
misc_feature 4093 /gene="Tnrc6a" /gene_synonym="Tnrc6" /note="serine-rich protein; Region: ser_rich_anae_1; NF033849" /db_xref="CDD:468206" misc_feature 4706..>4939 /gene="Tnrc6a" /gene_synonym="Tnrc6" /note="Argonaute hook; Region: Ago_hook; pfam10427" /db_xref="CDD:463088" misc_feature 5366..5923 /gene="Tnrc6a" /gene_synonym="Tnrc6" /note="M domain of GW182; Region: M_domain; pfam12938" /db_xref="CDD:432890" misc_feature 5996..6781 /gene="Tnrc6a" /gene_synonym="Tnrc6" /note="TNRC6-PABC binding domain; Region: TNRC6-PABC_bdg; pfam16608" /db_xref="CDD:465195" misc_feature 6803..7078 /gene="...
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Redirect URI : https://172.18.8.233:20082/rn/Argonaute
lang : en |
div : |
spe : rn |
query_string : Argonaute |
format : html |
download :
0.000 | 0.000 | search_start;
0.079 | 0.079 | count_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?source=Rattus norvegicus (Norway rat)?to=0&format=json
0.172 | 0.093 | search_done; http://172.18.8.71:7700/v1/refseq/query?q=((full_search:*:Argonaute)%7C(nt:Argonaute)%7C(aa:Argonaute))?source=Rattus norvegicus (Norway rat)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.177 | 0.005 | cgi_end;
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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