2024-05-19 23:38:51, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XR_003238988 1502 bp RNA linear PLN 07-AUG-2018 DEFINITION PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278998 (LOC107278998), transcript variant X7, ncRNA. ACCESSION XR_003238988 VERSION XR_003238988.1 DBLINK BioProject: PRJNA122 KEYWORDS RefSeq. SOURCE Oryza sativa Japonica Group (Japanese rice) ORGANISM Oryza sativa Japonica Group Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029265.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Oryza sativa Japonica Group Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.1 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1502 /organism="Oryza sativa Japonica Group" /mol_type="transcribed RNA" /cultivar="Nipponbare" /db_xref="taxon:39947" /chromosome="10" gene 1..1502 /gene="LOC107278998" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns" /db_xref="GeneID:107278998" ncRNA 1..1502 /ncRNA_class="lncRNA" /gene="LOC107278998" /product="uncharacterized LOC107278998, transcript variant X7" /db_xref="GeneID:107278998" ORIGIN
ccgccgcttacaggtgggtcccactccgcactgcaatcccttcccttccgcttcctctctcaatctcttcttgcctcgtctcttcccccaaatcgggcgaatcccaaatcaaccaaaccctagcccgcggcggccaccgcgatggccacctccacgcggctgcggcggcgacggccgcctccgccccttgcatgcctcccccaccgaggagcggtgtgccagtgccagaggcggcggcggcggcgaccggatcatggcgcttctcctgtcggtggacggccgcataaggtgtgggggtgacatcgcgtcggtcgagctcgacggcgtgcggtgacctcctcggcggcgcgttctccctcctccctctcctcgagtggggccgcgcggtttcgtcgtcgtccgcgaccacgccgtttccaggcacgtgctatgcgagaaaggggctcgtcgccgaggtatccgagttcctcttcggttccgggttttccaccgcctaggacgcgctctggaagtgaatagatgaaagtactacgtcaagctacaaaaccaattcaaggctaagtaaggttaatatggagtactgacaactggtcaaatatactatggtggcgcttactttgctgtatcatagccatctattcagagcatgagaatgttgggcaatgtcagctggctgctgtcagagcaatgaggcctttccaaagcaagcaatttagcgaccaaagaagagtcttattctcaatgattagcacctcagtaggtaaccaaagcaagcaacaaaaaaacagaacaaagagtgcagtaaagcacctggagatgaggatgtacccgttgcagttctcgttcaaaactttgactatacagagaaaaagatatcaatgaatgatcacctacaaagtgggtaaaaactgcggtggcagaggtagaggacacaatgatgaccaaggagaagcttgcaagtaagatggggactggcttttgtccaaatacaaaggtcaactgcaaccggtactgccgtcctggaactggcagtaggggtggagaccttggcagaattgattcatggagaagtcacttccccctgtgctgtttggaacaaatgatcaaccatgtccaatgcagtgaagtgagagcaccttggtaattgctactgttgttctcttttccaacacaagtacatatgatttaacacaggtgatgttcatccgagggaaaggcaggagcagagaagacggagtcagggaccttggaatagaaaggggaatgtatggggggggggggtggaataggagatggagtacatgatttattattttagaacttcaagtattttgcttggtgatgtatttgttaggacttgagatttttcacaataaccattgtacatggactgttgtcggactttgtgctgttaatttggtttcaatatttgtttaccgcatgcatgacccgttttcacaacatttggctgcagcagattgagcaaattgatacaggatgta
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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