LOCUS       NM_001420493            1804 bp    mRNA    linear   PLN 02-MAY-2023
DEFINITION  Oryza sativa Japonica Group GDSL esterase/lipase At1g54790
            (LOC4338728), mRNA.
ACCESSION   NM_001420493 XM_015784971
VERSION     NM_001420493.1
KEYWORDS    RefSeq.
SOURCE      Oryza sativa Japonica Group (Japanese rice)
  ORGANISM  Oryza sativa Japonica Group
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AP014961.1, AK240941.1 and CI131438.1.
            
            On May 2, 2023 this sequence version replaced XM_015784971.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK240941.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00008650, SAMD00020310
                                           [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-235               AP014961.1         19502874-19503108
            236-1591            AK240941.1         2-1357
            1592-1804           CI131438.1         335-547
FEATURES             Location/Qualifiers
     source          1..1804
                     /organism="Oryza sativa Japonica Group"
                     /mol_type="mRNA"
                     /db_xref="taxon:39947"
                     /chromosome="5"
                     /map="5"
     gene            1..1804
                     /gene="LOC4338728"
                     /note="GDSL esterase/lipase At1g54790"
                     /db_xref="GeneID:4338728"
     exon            1..559
                     /gene="LOC4338728"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    283..285
                     /gene="LOC4338728"
                     /note="upstream in-frame stop codon"
     CDS             301..1467
                     /gene="LOC4338728"
                     /note="Os05g0401000"
                     /codon_start=1
                     /product="GDSL esterase/lipase At1g54790 precursor"
                     /protein_id="NP_001407422.1"
                     /db_xref="GeneID:4338728"
                     /translation="

MRGPPHAAAVLLVAAAALCLGGRAEELEASSPEFNYPAVFNFGDSNSDTGGRVAAGFESIAPPYGSTFFGSPSGRFCDGRLIIDFLMDAMDMPFLNAYLDSVGAPNLRAGVNFAQAGCSITPATATSVSPFSFGLQIKQFFAFKDKVTKLLSKGDTYRRYIPQSDYFSRGLYTFDIGQNDLAGEFYWKTEDQVAASIPTILLEFETGLKKLYEQGARKFWIHNTGPLGCLPQNVAFFGKDRSQLDELRCVAKHNRVAKLFNLQLHALCTKLRGEFAGASITYVDIYTIKYSLIANYSRYGFENPIQACCGYGGPPLNYDSRVPCGQTASLNGNLVTAKGCKDSTEFVNWDGIHYTEAANFHIASQILTGRYSDPPFADKMPFLIKPKF"

     sig_peptide     301..372
                     /gene="LOC4338728"
                     /inference="COORDINATES: ab initio prediction:SignalP:4.0"
     misc_feature    409..1410
                     /gene="LOC4338728"
                     /note="a plant specific subfamily of the SGNH-family of
                     hydrolases, a diverse family of lipases and esterases. The
                     tertiary fold of the enzyme is substantially different
                     from that of the alpha/beta hydrolase family and unique
                     among all known hydrolases; its...; Region:
                     SGNH_plant_lipase_like; cd01837"
                     /db_xref="CDD:238875"
     misc_feature    order(433..435,649..651,835..837,1348..1350,1357..1359)
                     /gene="LOC4338728"
                     /note="active site"
                     /db_xref="CDD:238875"
     misc_feature    order(433..435,1348..1350,1357..1359)
                     /gene="LOC4338728"
                     /note="catalytic triad [active]"
                     /db_xref="CDD:238875"
     misc_feature    order(433..435,649..651,835..837)
                     /gene="LOC4338728"
                     /note="oxyanion hole [active]"
                     /db_xref="CDD:238875"
     exon            560..760
                     /gene="LOC4338728"
                     /inference="alignment:Splign:2.1.0"
     exon            761..927
                     /gene="LOC4338728"
                     /inference="alignment:Splign:2.1.0"
     exon            928..1198
                     /gene="LOC4338728"
                     /inference="alignment:Splign:2.1.0"
     exon            1199..1804
                     /gene="LOC4338728"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

aaacccctccaaaatttatgtaattacctcccatctctccatactgccatatctaacgcaaagccccaaaagcacaagggctaaaatgcaaaaacaaatagcagtaaaattgtaaaaagcttggcagtacactaatcatgggtggccaggtcttccctttacaacccaaaatcaactcaaatcaaatctccactgcttaagagcttcaagcatcagcaaccttctcctcctcttcgcttggagaagcaagagcaggagagcagaagcagagtggagtttagctagcgagcgcaagccaccatgcgcgggccaccgcatgctgcggcggtgctcctcgtcgccgccgccgccctctgcctcggcggccgcgcggaggagctcgaggcgtcgtcgccggagttcaactacccggcggtgttcaacttcggcgactccaactccgacacgggagggcgcgtggccgccgggttcgagtccatcgcgcctccctacggctccaccttcttcggctccccctccggccggttctgcgacggccgcctcatcatcgacttcctcatggatgcaatggatatgccgttcctcaatgcatatttggattctgttggtgcacctaacttacgtgcgggtgttaattttgctcaagctggctgttcaattactccagcaacggcaacatctgtcagcccattttcatttggtcttcagattaagcaattctttgcattcaaggacaaagttactaagcttctatctaaaggagatacgtacaggagatatattcctcagtcggattacttttcgcggggactttacacgtttgacataggtcaaaatgaccttgctggtgaattctactggaaaacagaggaccaagttgctgcatccattccgactattttgttggaattcgaaactgggctgaagaaattatatgagcaaggtgccaggaaattctggattcacaacacaggtcctcttggctgcttacctcaaaacgtagcttttttcggcaaagaccgatcccagctggatgaacttcgttgtgtagcaaagcataatcgtgttgcaaagcttttcaacttacagctgcatgcactttgcacaaagttaagaggtgaattcgctggggctagtatcacttatgttgacatctacaccatcaagtacagcctgatcgctaattattcgcgctatgggttcgagaatcccatccaagcatgctgtggatatggagggccacccttgaactatgacagtagagtaccttgtgggcagacagcgtctctgaatggtaatcttgtaacagccaaagggtgcaaggacagtacagaatttgtcaattgggatggaatccattacacagaagctgcgaatttccacatcgcgtcgcagatccttacagggagatactctgaccctccatttgctgacaagatgccatttctcataaaaccgaagttctaatgagcagatctttttttcgcttttataaactacgaggtgttgtatttgataaaaaaaaaacgttgtatttgttacttgtcaatagataataatcacatatatagctcttttcagttgttcatatatacttcgactactactgctacaaagcctcagcggtgattaactaaaagacatgtaggggttacagtgacctgagtagtacccaaaggtcctgagttcaaatctcctatggagcgaatttcagattgagttgtttgcggggctaagtttcttatctcaatggccgtatatatccggttggatatggaggccgggtagaaaatacccttctcta

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