GGRNA ver.2 Help | Advanced search | Japanese    Previous release (v1)

2026-01-18 12:14:27, GGRNA : RefSeq release 232 (Sep, 2025)

Summary:

Results:

Matches are highlighted with green background. Overlapping matches are dark colored.

Mus musculus NudC domain containing 3 (Nudcd3), transcript variant 3, mRNA. (3663 bp)
cgggcagctgcgaggagtaaagccatcctcactgggcacagtgcttccctgaatagaaatgaggttccgttactaaggaaggaaagggatagaaatgctggtgagtcatcggcacagatcgggggatgctgaggtaagtttattcacaccgagggtgaagtttttctgcgaggacattttgggagcactgttcagtcagtgacaatctggggtccctctgggaaattattgtgttctgggaccaggcaggtaaaggaggacctggaaaatgagagtgcatccaggaaatggtgaggtcacagtgaccttggaaagggccacctcattttgccccaacggttcagagtgactttctaagccactgagaaaggtggtggccaggaggcagcaagcagtttccttgaacagaaggtgctgtctttagcagtgcccatgccctgtcagtaaggagaggtcagtgggagatgggacctcacagggtcctaagagcttgatgcttatgtgttaatgtgacagtgtgggaaggcctggaatgagagggaatgttcttgcaagatacctgcaggtgggccacatacacacctgggttcctcaggagac...
position 1198
Synonym: mKIAA1068
NM_001419337.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus exocyst complex component 2 (Exoc2), transcript variant 1, mRNA. (4277 bp)
atcactgcagtggtgtggggagggttcacaaggacctgtatgtggaggccctgtcacacccacaaggcctggggaaggcttgtggtcttcaatgcagcctaaagatgaagccaggctcctcggcaaggcagcactccctccccctctgccacttcccacgcggtgaaatgtcttgctccatagctggaaagaggctgctctggcatgggctgtgttttgtaaagatttgaggtgccccaagtgaccaggcactgagctgtgactcagtggtgagtggcttgcgcagtagagtcaggtcattgtgacctgcaggcagctttcacctcactccatccttccgtcagcctctgttgcacttcactcttcagactgatctgtggataatgtaggctcctcttctagagttgacaaaactaattccagagcacagcatatgtaccctgtggattatttaaggtaaatgagtgtatgtttatttatcacagtgactggaagtagaaattgtaatcctttgttgcaaaataagtatgtaccgcattgtctcctccctgtgtgctgttattatatctgacataaacaaactaaattccaaagcagaag...
position 3777
Synonym: 2410030I24Rik; Gm29675; Sec5; Sec5l1
NM_025588.2 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)
Mus musculus exocyst complex component 2 (Exoc2), transcript variant 2, mRNA. (4376 bp)
atcactgcagtggtgtggggagggttcacaaggacctgtatgtggaggccctgtcacacccacaaggcctggggaaggcttgtggtcttcaatgcagcctaaagatgaagccaggctcctcggcaaggcagcactccctccccctctgccacttcccacgcggtgaaatgtcttgctccatagctggaaagaggctgctctggcatgggctgtgttttgtaaagatttgaggtgccccaagtgaccaggcactgagctgtgactcagtggtgagtggcttgcgcagtagagtcaggtcattgtgacctgcaggcagctttcacctcactccatccttccgtcagcctctgttgcacttcactcttcagactgatctgtggataatgtaggctcctcttctagagttgacaaaactaattccagagcacagcatatgtaccctgtggattatttaaggtaaatgagtgtatgtttatttatcacagtgactggaagtagaaattgtaatcctttgttgcaaaataagtatgtaccgcattgtctcctccctgtgtgctgttattatatctgacataaacaaactaaattccaaagcagaag...
position 3903
Synonym: 2410030I24Rik; Gm29675; Sec5; Sec5l1
NM_001360093.1 - Mus musculus (house mouse) - NCBI - UCSC - RefEx(expression)

Data Export:

Maximum 10000 results can be retrieved as Tab-delimited text or JSON format.

Debug Info:

Redirect URI : https://ggrna.dbcls.jp/mm/iubcomp%3aaggtcannrtgacct
lang : en | div : | spe : mm | query_string : iubcomp:aggtcannrtgacct | format : html | download :

0.000 | 0.000 | search_start;
0.131 | 0.131 | count_done; http://172.18.8.71:7700/v1/refsub/query?q=((nt:aggtcataatgacct)%7C(nt:aggtcatattgacct)%7C(nt:aggtcatagtgacct)%7C(nt:aggtcatactgacct)%7C(nt:aggtcattatgacct)%7C(nt:aggtcattttgacct)%7C(nt:aggtcattgtgacct)%7C(nt:aggtcattctgacct)%7C(nt:aggtcatgatgacct)%7C(nt:aggtcatgttgacct)%7C(nt:aggtcatggtgacct)%7C(nt:aggtcatgctgacct)%7C(nt:aggtcatcatgacct)%7C(nt:aggtcatcttgacct)%7C(nt:aggtcatcgtgacct)%7C(nt:aggtcatcctgacct)%7C(nt:aggtcacaatgacct)%7C(nt:aggtcacattgacct)%7C(nt:aggtcacagtgacct)%7C(nt:aggtcacactgacct)%7C(nt:aggtcactatgacct)%7C(nt:aggtcactttgacct)%7C(nt:aggtcactgtgacct)%7C(nt:aggtcactctgacct)%7C(nt:aggtcacgatgacct)%7C(nt:aggtcacgttgacct)%7C(nt:aggtcacggtgacct)%7C(nt:aggtcacgctgacct)%7C(nt:aggtcaccatgacct)%7C(nt:aggtcaccttgacct)%7C(nt:aggtcaccgtgacct)%7C(nt:aggtcaccctgacct))?source=Mus musculus (house mouse)?to=0&format=json
0.216 | 0.085 | search_done; http://172.18.8.71:7700/v1/refsub/query?q=((nt:aggtcataatgacct)%7C(nt:aggtcatattgacct)%7C(nt:aggtcatagtgacct)%7C(nt:aggtcatactgacct)%7C(nt:aggtcattatgacct)%7C(nt:aggtcattttgacct)%7C(nt:aggtcattgtgacct)%7C(nt:aggtcattctgacct)%7C(nt:aggtcatgatgacct)%7C(nt:aggtcatgttgacct)%7C(nt:aggtcatggtgacct)%7C(nt:aggtcatgctgacct)%7C(nt:aggtcatcatgacct)%7C(nt:aggtcatcttgacct)%7C(nt:aggtcatcgtgacct)%7C(nt:aggtcatcctgacct)%7C(nt:aggtcacaatgacct)%7C(nt:aggtcacattgacct)%7C(nt:aggtcacagtgacct)%7C(nt:aggtcacactgacct)%7C(nt:aggtcactatgacct)%7C(nt:aggtcactttgacct)%7C(nt:aggtcactgtgacct)%7C(nt:aggtcactctgacct)%7C(nt:aggtcacgatgacct)%7C(nt:aggtcacgttgacct)%7C(nt:aggtcacggtgacct)%7C(nt:aggtcacgctgacct)%7C(nt:aggtcaccatgacct)%7C(nt:aggtcaccttgacct)%7C(nt:aggtcaccgtgacct)%7C(nt:aggtcaccctgacct))?source=Mus musculus (house mouse)?to=49?from=0?snippet=full_search?drilldown=source?get=accession,version,gi,length,symbol,synonym,geneid,division,source,definition&format=json
0.219 | 0.003 | cgi_end;

GGRNA ver.2 by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]