LOCUS       XM_017319123            3850 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus kinetochore-localized astrin/SPAG5 binding
            (Knstrn), transcript variant X2, mRNA.
ACCESSION   XM_017319123
VERSION     XM_017319123.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000068.8) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_017319123.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3850
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="2"
     gene            1..3850
                     /gene="Knstrn"
                     /gene_synonym="1700025D04Rik; C15orf23; D2Ertd750e; SKAP;
                     Traf4af1"
                     /note="kinetochore-localized astrin/SPAG5 binding; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 22 ESTs, 330 long SRA reads, 2 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 20 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:51944"
                     /db_xref="MGI:MGI:1289298"
     CDS             113..1000
                     /gene="Knstrn"
                     /gene_synonym="1700025D04Rik; C15orf23; D2Ertd750e; SKAP;
                     Traf4af1"
                     /codon_start=1
                     /product="small kinetochore-associated protein isoform X1"
                     /protein_id="XP_017174612.1"
                     /db_xref="GeneID:51944"
                     /db_xref="MGI:MGI:1289298"
                     /translation="

MAAPEAEAQETAFRTTGPPTDSEPRPFPPSSRKFPFESAAADSNEDWAVAAEHYLKGSGENGGWEQPAPGVQPSHPATMASAKTVCDAQPHSMPSCGLPADTQTRATSKLPVKSKEADLLRHLHPGGPEPDVTKVTKSRRENGQVKAAETASRRNLRNSYKPFNKQKPEEELKDKNELLEAVNKQLHQKLTETQGELKDLTQKVELLEKFQDNCLALLESKGLNPGQETLASKQEPTTDHTDSMLLLETLKDELKVFNETAKKQMEELQGMLCLSVHTYRLRQCPRRLELGYRQL"

     misc_feature    <617..922
                     /gene="Knstrn"
                     /gene_synonym="1700025D04Rik; C15orf23; D2Ertd750e; SKAP;
                     Traf4af1"
                     /note="Apolipophorin-III precursor (apoLp-III); Region:
                     ApoLp-III; pfam07464"
                     /db_xref="CDD:462172"
ORIGIN      

ggctggaatgtgacagcttggctcaatagctccattcaagccagcccagtgagtccctggcccagcctcgaccagcaggctggagcaactctgctcgaaccttccgtacagcatggcggctcccgaggccgaggcacaagagacagccttccgtacaacagggccgcctacagactcggagccgcgccccttccctcccagctcccggaagtttccttttgaaagcgcggcggcagactctaacgaggactgggcagttgctgcggagcattatttgaaagggagcggagagaacggcggatgggagcagccggcaccgggggtccagccaagccacccggctacgatggccagtgctaagacggtgtgcgatgcgcagcctcactcgatgccgagctgcggcttgcccgcagatacacaaactcgagctacttctaaactacctgttaaatccaaagaagcggatttgcttagacatcttcatccaggagggccagagcctgatgttacaaaagtcaccaaatcgagacgagagaatgggcaggtgaaagcggcagagactgccagcaggaggaacctcagaaacagctacaaaccgtttaataagcaaaaaccggaggaggaactaaaggataaaaatgagctgctggaggctgtcaacaagcagttacaccagaagctgacagagactcagggagagctgaaggacctgacacagaaagtggagctactggagaagtttcaggataactgcttagcacttttggagagcaaaggtctcaacccaggccaagagaccctggcatcaaagcaggaacccaccacagatcacacggactccatgctgctgctcgaaactttgaaagacgaactgaaggttttcaatgaaaccgccaagaagcagatggaggagctacagggtatgctttgcctaagtgtgcacacgtacagactgcgacagtgtccacggaggttagagctgggttacaggcagttgtgagctgccgtgttaggcactgcaaactgaacctgggtcagctttgcaggagcagccactgaactgctgagccacctctctggtttatccttccttcctcttttctttttctctgtcccagagatccagccccaggatgatcctcttcatggagattatagacgtgagccaccatgcttggcttgctttttagttacttatttttttaacatttatttttacttctgtgtctctgtgaatgtatgtcacgtatgcgcaggtacccatgggagacataagatggcttcagaccccttagagctagagttatagacattggtaaggtacctgccatgggtactaaaaactgagctttagtcgtcggaaggagcaagggatagtcaactgcaaagagatctccagttcccctgctttcctattacagttcagtgtgaatgtatgtgggtgcatagtgcgtccatgccccagtgcatggggctcacactccggttattaggcttggtggcaggcacctttacccttgaagcgatttcacctgcccccatcccccccatccttgcttggatcatgtttggctttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagagagagactgcccctgcctccgagaactgcagagctgagagccaacccactccctaccgtggttgcagctctgggaatacaaacccccaagtcagttgtacctcctgagggctgggcttctggagagttgccaggagtggccctcaccctgttatggctttgctccttggggggaaagggacggctcctacagtcctgagttggggacaaagatggagaagggggggacatcaaatggccagggctccctgccccggtagggctgactcaggtcagcagccacggagcaacaaggatcaactctctagggatataacaaataacacactcctaaatcagactaggtcaaggctcaactccctccttccattctggaggagtccaagacagagactacactccagtctgggctccctgcaagcagcccatcagagctcgccacgattgacgtcccaatcgatggacccattcacatagctgggcaaaaaggatggaaggcaagggtctgcctagggttgaggtcagggtgggaacagggccggggcgcccagcagggacaacaacagctggtacgacttggggtaaggtgggtaagtcccacatgtgccatagaaggcagcccatagcaccaggcccagtatacttgtttgtttttaatgaactattttgaaataattttagatttatagaagagttacatatctaatatagaaaattcagtttccctaggataatacctcatgctgtcctcactggcatgccattggtaactaaagtcccagacttagtactgaatccatttttttttttaagatgcttttcttccacaaattctttctgtgttcccgaggaccctagaaaggttcctggggataaaaccattgcaaggcccaggggagcaaagtctccacacctcccatgggccacaccgcagtatgctcagagagctgagactgaaatccatgctaaaaagctcttctcaggagacctgggtgaactgtccagattgtagggctagagggttgagagtgcttgctgctcctgcaaaggtcccaagttctacactctgcagctcatgccttcataactccagctctagggatctgatgcccttttgtttctctcctctccatggatatccaagggtatacacacacacacacacgcacacacacacacacacacacacacacacacacacacacacacacaattaccaagaaaagaaaatgtaagagccaggcacggtagcacacaccttctattacagaggcagcaggggtcttcgtacgtttgaagcctggtccacatggtgagattcttggacgccttccgattgccagacaaatggtggggcaggagacacaaacggtttcattgttccagtttaaatacagagtagggaaattccccgagccagcacagataaattttaaggtgggaaataagatgctgtctggtactggggtcgcccccctctatgtagcacgggtataacggtctggtccgggtgctgtctttgttgtaagagttgtgttatgggtttccctctgggatgatttccctttcaggccttgaaggtgaagttgaagctgaaagaagaggagagtgtccagttcctggaacagcagaccttatgtaaggacgaagccagtgacttcacaataatcctagaggaaatggagcagctcttagaaatgtagctcaaggcaggtggccggacggcttcttcctggataaaccctcggcagaggctacttaggatatcttcaaggactcaccatcccttaggtaaagaccttctgcagcagttgatccgataaggccagttgatgctggggttcctcctttaagcagattgccccaccttcagatggctcagctctcctgcaagagaggaacctgggagtttgactccatttcctgtgcagcagagagagcagcagcccttagaactaggatactaaaccagctgccttggagactctagagactcggaaacatgggaagaaggcccacaccacaacagcacgagtgctgtgcgagagatgtgactgtgagccatgctgtccccttgtctctctggttgagttaagttttatgaacttgaaattcttgaagtttttttggcttaataaatgggggtggaggtatacaaagtagcacctacctaaaactacaactagagctttggaaataaatgtttctatgaatattaa

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