LOCUS       XM_006538628            7566 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus opioid receptor, delta 1 (Oprd1),
            transcript variant X1, mRNA.
ACCESSION   XM_006538628
VERSION     XM_006538628.5
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000070.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_006538628.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7566
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="4"
     gene            1..7566
                     /gene="Oprd1"
                     /gene_synonym="DOR; DOR-1; mDOR; Nbor"
                     /note="opioid receptor, delta 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 2 ESTs, 34 long SRA reads, 25 Proteins, and 95%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 8 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:18386"
                     /db_xref="MGI:MGI:97438"
     CDS             737..1708
                     /gene="Oprd1"
                     /gene_synonym="DOR; DOR-1; mDOR; Nbor"
                     /codon_start=1
                     /product="delta-type opioid receptor isoform X1"
                     /protein_id="XP_006538691.1"
                     /db_xref="GeneID:18386"
                     /db_xref="MGI:MGI:97438"
                     /translation="

MYGSRRVERAFMSFMEDFQLTLLQTPRYTKLKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTQPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDINRRDPLVVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRTPCGRQEPGSLRRPRQATTRERVTACTPSDGPGGGAAA"

     misc_feature    815..1576
                     /gene="Oprd1"
                     /gene_synonym="DOR; DOR-1; mDOR; Nbor"
                     /note="seven-transmembrane G protein-coupled receptor
                     superfamily; Region: 7tm_GPCRs; cl28897"
                     /db_xref="CDD:475119"
     misc_feature    842..907
                     /gene="Oprd1"
                     /gene_synonym="DOR; DOR-1; mDOR; Nbor"
                     /note="TM helix 2 [structural motif]; Region: TM helix 2"
                     /db_xref="CDD:410628"
     misc_feature    953..1021
                     /gene="Oprd1"
                     /gene_synonym="DOR; DOR-1; mDOR; Nbor"
                     /note="TM helix 3 [structural motif]; Region: TM helix 3"
                     /db_xref="CDD:410628"
     misc_feature    1088..1138
                     /gene="Oprd1"
                     /gene_synonym="DOR; DOR-1; mDOR; Nbor"
                     /note="TM helix 4 [structural motif]; Region: TM helix 4"
                     /db_xref="CDD:410628"
     misc_feature    1220..1291
                     /gene="Oprd1"
                     /gene_synonym="DOR; DOR-1; mDOR; Nbor"
                     /note="TM helix 5 [structural motif]; Region: TM helix 5"
                     /db_xref="CDD:410628"
     misc_feature    1367..1435
                     /gene="Oprd1"
                     /gene_synonym="DOR; DOR-1; mDOR; Nbor"
                     /note="TM helix 6 [structural motif]; Region: TM helix 6"
                     /db_xref="CDD:410628"
     misc_feature    1478..1555
                     /gene="Oprd1"
                     /gene_synonym="DOR; DOR-1; mDOR; Nbor"
                     /note="TM helix 7 [structural motif]; Region: TM helix 7"
                     /db_xref="CDD:410628"
ORIGIN      

gcacgggggtggggcgggaggctgggccgggctgggggcacctggagtcagcggagcccaggcagggagcgcgcgcgaggcctctctggcccagctcggagcccggtggtgcagcgcccgcccccgatcgcgggcgcagactggcggccgcctccggaccacgtggtgcgcgcggcggctcggggctccccgggcttgggcgagcactgcgggcggtcgaccgggcggaggaggcgggagcgagcgctgcagcctgcggcgtcggggccgtggcctccgttttccgcgcgccactcgctgggtccctgcgcccagggcgcacggtggagacggacacggcggcgccatggagctggtgccctctgcccgtgcggagctgcagtcctcgcccctcgtcaacctctcggacgcctttcccagcgccttccccagcgcgggcgccaatgcgtcggggtcgccgggagcccgtagtgcctcgtccctcgccctagccatcgccatcaccgcgctctactcggctgtgtgcgcagtggggcttctgggcaacgtgctcgtcatgtttggcatcgtccgtgggatgaagtcttcctccaacccagaccgccttcctagacagaacttgtccggagtatctgctattctcactttgaatattcctccggctttgaagctccagacgtcatatcccaagacactcatcagttagttgtgcctgcagaggattgatcacagtgttatgtatggcagcaggagagtggaaagggccttcatgtccttcatggaggatttccagttgactttactccagactcctaggtacaccaaattgaagaccgccaccaacatctacatcttcaatctggctttggctgatgcgctggccaccagcacgctgcccttccagagcgccaagtacttgatggaaacgtggccgtttggcgagctgctgtgcaaggctgtgctctccattgactactacaacatgttcactagcatcttcaccctcaccatgatgagcgtggaccgctacattgctgtctgccatcctgtcaaagccctggacttccggacaccagccaaggccaagctgatcaatatatgcatctgggtcttggcttcaggtgtcggggtccccatcatggtcatggcagtgacccaaccccgggatggtgcagtggtatgcatgctccagttccccagtcccagctggtactgggacactgtgaccaagatctgcgtgttcctctttgccttcgtggtgccgatcctcatcatcacggtgtgctatggcctcatgctactgcgcctgcgcagcgtgcgtctgctgtccggttccaaggagaaggaccgcagcctgcggcgcatcacgcgcatggtgctggtggtggtgggcgccttcgtggtgtgctgggcgcccatccacatcttcgtcatcgtctggacgctggtggacatcaatcggcgcgacccacttgtggtggccgcactgcacctgtgcattgcgctgggctacgccaacagcagcctcaacccggttctctacgccttcctggacgagaacttcaagcgctgcttccgccagctctgtcgcacgccctgcggccgccaagaacccggcagtctccgtcgtccccgccaggccaccacgcgtgagcgtgtcactgcctgcaccccctccgacggcccgggcggtggcgctgccgcctgacctacccgaccttccccttaaacgcccctcccaagtgaagtgatccagaggccacaccgagctccctgggaggctgtggccaccaccaggacagctagaattgggcctgcacagaggggaggcctcctgtggggacggggcctgagggatcaaaggctccaggttggaacggtgggggtgaggaagcagagctggtgattcctaaactgtatccattagtaaggcctctccaatgggacagagcctccgccttgagataacatcgggttctggcctttttgaacacccagctccagtccaagacccaaggattccagctccaggaaccaggaggggcagtgatggggtcgatgatttggtttggctgagagtcccagcatttgtgttatggggaggatctctcatcttagagaagataaggggacagggcattcaggcaaggcagcttggggtttggtcaggagataagcgcccccttcccttggggggaggataagtgggggatggtcaacgttggagaagagtcaaagttctcaccacctttctaactactcagctaaactcgttgaggctagggccaacgtgacttctctgtagagaggatacaagccgggcctgatggggcaggcctgtgtaatcccagtcatagtggaggctgaggctggaaaattaaggaccaacagcctgggcaatttagtgtctcaaaataaaatgtaaagagggctgggaatgtagctcagtggtagggtgtttgtgtgaggctctgggatcaataagacaaaacaaccaaccaaccaaaaaccttccaaacaacaaaaccaaccctcaaaccaaaaaactatgtgggtgtctctgagtctggtttgaagagaacccgcagccctgtatccctgtggggctgtggacagtgggcagaagcagaggctccctggatcctgaacaagggccccaaaagcaagttctaaagggacccctgaaaccgagtaagcctttgtgtcaagaagtgggagtagaaccagaaaggtggctgagtgattaagggcacgtgactctcttgcagaggacataggttcgattcccagcacccacatagtggctcacagccatctgtaaccccagtcgcagtcaatctaatgctttccaacaactgtgggcaccagacatgaacatggtacacatacatacatatatacatacatacaggtgaaacactcagacacataaaataaatcttcttttaaaagtggtggcacatgcctttaatcccagcacctgggaggcagaggccagcctggtctacatagtgagttccaggatgctcagggctacatggtgagaccctgtctcaataaaagtgtgtgttgtagggagagtaaatcgtgaggcagggggctgaggcctctgcttacaggttaaatcctgaagcctgaacatggatgcttttggggttcctggggtactagtgtatgtggctcagtaccagagcaccgagaccctttgtttgagcccccccgtatgtggtaacatgaataaggattctcaccaaatacttggacccttgataagaacccggaagaagactcttgccccttctcccagcgtctggctgtccatcagatgcctggtgtccatgactcccagggactggaactgccccagtcggactctgctttgaagggattgagggaagaagggcttttatagcagtgatgtcggtgtggccctttgctctctcccatttctcctgagtccctcatttgctctcgctgcagagggtggcccagaaactgatccaggctctcctggatctcagctcccctggatgtcattgtttgccctgtccccgttcctcctccactgcctgagggagcaacctgcccctgactccctattgaagcagtctgctgacatccttgtaaaaacaaatttaattctcttccttttttgggacagatgggaagaaattgacgcctttgtctcaaaccaaaaaagaaagaagcagagagacaatatacttcttttctttttgacagccatttctttggaacaaaagctgcaggctgtcactccagcagggacctaactgccttccgggaggcgggagctagactagtgagtagaaaaggttcctttgatggacaaagcatagtccttttctccctgtggggtccctaaaagcttaggtccttgggaatctctgtagcctgggatacagagtgattgtcaccgctgacatcagacctgcccagccactgtagcctggaacttaacctcttagctgacctttaccacctaaatggtcactatgaccatggagatttctgtagagtgtggtggtggtggtgaggtggtcaccaggccaaagacacccctagacactcactggaaagtcctgctactctgctagggaggtagcagacagcagactcctgaagcaggtgtcacgggacttagtgctgtgtgtccttgcaaggactgtggccttgtgccccacccagggcagagttgtgttagagctgacccagccggtcctttcctgtagggatgagaactgacttggcctcatgagtataggtattgcaggtgtgatttcaaaattgtttaaacgttgattgattttgtgttggatggggcatgctcccgccactgtgcacatgaggaggtcaggggagagttttaatagaggtgcttctcttcctctgcctcctgagttcataggggttgaactccagtcagcaggtttgacagaaaggacctttatccaccaaccccaattaaaagaaattatttatttgtttgctaatttgtgtgtgtgtgtgtgtacagtaacataccatggcaccaccacatccagcaagatttgaccaacttttttctaaccctttctgataatgtcctgggatcagcctcagctgattatatacatacacatataacatacatacccaggtgattgcatgccaatgtgacagatacagtgacagaaaggcccaggggggatgtcccagaagtactttttcattaaaaaacctgtttgcagcaattctataagaggcggcaaagggccggtgggttttaaaggatgcataggaattggctactgggggagcagcagagtgggtagaaaagtgtgagcatgtccaagacccaaaagttatgagcagtagagacccggagcttaactgagtacggtggtgtaccaggcctggcgcccattatctcagttcatcccctcaacagcccctgggccaaagtagcagtatccctgtctgtctgtctgcctgtctgtctgtgtctgtctatcatctatctatctatctatctatctatctatctatctatctatctatctatctatctatctatcatctatttttgagacaatgtctcactatgtaattgtggttgactgggaacttgctatatagactatgctagttttgaactcagagatcagtctgcctctgcctcctgagtgctgggattaaaggtggtgccatacctgcctagaatccccattttattttagtaagtatgtatgcatgcatgtatgtacatgtgtgtgtatatgtatgtatgtatatttattttggggggatagagtttctttgtgtagccccggctgtcctggaacttgttctgtagaccaggctggcctcaaatccacagaaatccccctgcctctgctttctgagtgctgagattaaaggtatgtgccatgcctggctagtgtccccatttcagatgggaaagctgagctcggaggttaagctgcttttccctgagtcacagaccttgtcgggagtgtcagaactccggacagaggaattttagaggaaattcccaggtccacgtttactgtgagttctgggcatcagtgaagcagaacgatgtcccagctgtcgctgggttcctgggatgaggcttttgaagacttaacaaaataggagaaaagggcaattttccgtgaacttttgttcctccttaagttctccaaatctttgcctttcaaaatgtactgtgcattttgcacggtgcattttttttaaagctccaaattgacagcgtaattctagactatcacaggtctctcttcctccccaaaatttccattccgttctctctacgaggtgggagggaagattgtgcctttggtttaaaaatgccctacagtttccaatctcttcttgatgtcctcgagctccagatgaatgctagaatctgatgttggcttcctctctcagattctcagttttcccgtcctgtagagtggactttctttgtagaatggctgcgaggattaattaggtaatgtatgtatagccacagggcttgtcactcagcaagtagctgtgactggaaaatagccagggtgcagggtcagagctggagacccagagggaaatgtgcattggcttctggggtgcactgaggagagaggagtctgagaatctggcctggagacctccgagaccccatggtgagtgtgtgcgaagccactggagcagcaggaggaagaggagaatgtgttgtcatggaaacaggaggaggagggtgctcccagggagagggagtgatggataatgtcaagtttaatagagaggatggaggtgcagagggcaggagggcaatgagagcaaaccagagacctcaactttagtctccgacatgccctgagaaaccccaaaacctggcttcaagtctcagccctggagttaaataaacacatgaactagcaaaggatttgccttcaccaaacttctgttttctcctagatagaagatgagagagtgggtagtctctaatacgatggccaacatctaatcaggttcttgagtggattcatggccacgtagcagctggatctcaggcaagggatggaaccccaagagtcccctaagagcatgcagaaattctggcacatagtgggccgcaatacaaggttcttccctagtagttatgggggctccaaagctggctgttgtcaggaagttgcttggcttggagtcctaagtgcctggcatgttgagagatgggcatttggcatctggaaggttgctggagccgcaagtgccctggctgagctcctacctgctagaacacagtccaaaggccagctgccatcgctctgtatctatacttagatcccaaacttagaactgcagcgccatacgaagccagctgcggagactctaaaccctagacagtgaggttccctgttagaccccgactttggtacttatatacaaaccatgtgtggaacagagtctggagtgtagctcagcagttagaagcaggaaccactcttccagaggacctgagttcagttcccagcacccaaatcaagcaggttacaactgcctgtagttttagggaatctcacccctctgtcctctgcaggtttccccagatgtgtcaggatctcatgatgtagcccaggctagcatcaagctcacaatgtagccaagggtgtcctttaatttctgaccctccttcctccacctcccaagtgctggaatcataggtgtgtaccaccacactagctcacaattattcattcactgcctattcctttatgttacttctggccctaggtgggcaatgctcattggcaggagtgatgcagagtcaggatgtggtccctcattctgagcttgtagatgggctcctgagaccaggacagtgggtttgaggctctggatgcaggcagcttgagagttcaaactggagtcaccatgagctgatgagggacctcagcagctgaagatgctgtcagtcatgttcaagccgtgacgtcacattatgatgctgccatctatgaagttcatactggagagctgtttaatccagctacaaaa

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