2024-04-29 13:59:40, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS NR_152723 2147 bp RNA linear ROD 24-FEB-2022 DEFINITION Mus musculus predicted gene 15939 (Gm15939), long non-coding RNA. ACCESSION NR_152723 XR_380237 VERSION NR_152723.1 KEYWORDS RefSeq. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 2147) AUTHORS Harrow JL, Steward CA, Frankish A, Gilbert JG, Gonzalez JM, Loveland JE, Mudge J, Sheppard D, Thomas M, Trevanion S and Wilming LG. TITLE The Vertebrate Genome Annotation browser 10 years on JOURNAL Nucleic Acids Res 42 (Database issue), D771-D779 (2014) PUBMED 24316575 COMMENT VALIDATED REFSEQ: This record has undergone validation or preliminary review. The reference sequence was derived from AK079058.1 and AC153964.3. On Dec 19, 2017 this sequence version replaced XR_380237.1. Sequence Note: This RefSeq record was created from transcript and genomic sequence data to make the sequence consistent with the reference genome assembly. The genomic coordinates used for the transcript record were based on transcript alignments. ##Evidence-Data-START## Transcript exon combination :: AK079058.1 [ECO:0000332] ##Evidence-Data-END## PRIMARY REFSEQ_SPAN PRIMARY_IDENTIFIER PRIMARY_SPAN COMP 1-425 AK079058.1 2-426 426-647 AC153964.3 30372-30593 c 648-663 AK079058.1 651-666 664-888 AC153964.3 6151-6375 c 889-988 AK079058.1 894-993 989-2147 AK079058.1 995-2153 FEATURES Location/Qualifiers source 1..2147 /organism="Mus musculus" /mol_type="transcribed RNA" /strain="C57BL/6" /db_xref="taxon:10090" /chromosome="10" /map="10 18.68 cM" gene 1..2147 /gene="Gm15939" /note="predicted gene 15939" /db_xref="GeneID:102632938" /db_xref="MGI:MGI:3801831" ncRNA 1..2147 /ncRNA_class="lncRNA" /gene="Gm15939" /product="predicted gene 15939" /db_xref="GeneID:102632938" /db_xref="MGI:MGI:3801831" exon 1..661 /gene="Gm15939" /inference="alignment:Splign:2.1.0" exon 662..930 /gene="Gm15939" /inference="alignment:Splign:2.1.0" exon 931..1090 /gene="Gm15939" /inference="alignment:Splign:2.1.0" exon 1091..1170 /gene="Gm15939" /inference="alignment:Splign:2.1.0" exon 1171..2147 /gene="Gm15939" /inference="alignment:Splign:2.1.0" ORIGIN
gagggatggagcagtggagagagatggtggctgagacccgcctgaggattcaccagggagcagcctcgacgacctcatccaaggacagccagcctgtcagcaggaagggtggggacccgcagagctaggacctcgctgcccggccagccttttttgccttcgagagaggaagagaagggatgggaacgccgggacggtgcaagtccactagggctgcggccgcctttacctttgtacgcctaagcggtagcacggcgcggcccgcaggggctgttccactgcccccagagccactgggtcccgcgcgcccctggggcttccgcagccactcctgagcccgctgctgctaaaagaggatccggctcatcccaactcttgattatcccagaagagagctcctagcgttgtaagcgctcacacatgctctccgctcctctctctgcctctgcctcgtaggggtaggaacgaattttgggacacattcaaatatcccaagccccaagttcagcctgctctggtctccaggtcccagccaggtccagctataactgatctagtggaacagctatggcctcacagcatccccatgctcctcctcgctttgtgtgcaagacccgggagtgcggggtagagtagcccttgattttgcaacttaattaagctttactatgtttaaagcacctttttactctgctgggtagacctttctgctcaacattcttcaaaacaggactggcaagtgtcctaggaagattctcagggctagtatcactcacaactgtagaaatttgaacatttcaaagaggaattcaggacctttttcttgaattaattcaaagcagtcttagaaaagtgattttcttctcaagaacagtcaccatggtcatcgaggataagcaatagccatcaggaacccaggacatggtacagaatgctcagaattggaagtgactaatagtaaagtgatctatactatcatcatactgggccaggccatatcaagccccatatcaagctcctacaaccaggactggagaagtctaaatgacccttagagaaggggctgttacttctgtgtgtctctgcaaagaatcagagtctttttgctgttgttgcaagagtagaagaaaccacggatgtgggaaattcagaatttttcagctatacaaaaaactgctggcctctgtattccacaccctcacccgtgcagcctgccctcggcggagtcccggaaccaaggtggctcccgctggagcctgaggcagaaacctctcgggccgggcggacccctgtgctctcaccaggaaggtggccggttgtctggagccgaagatggcgccgcctcagaacaggaaaatctttttatggttcttgtgaagctcacagttttactgccatgtatatttatttatatatttccttaaagcatctcatttattgtagttattaaattgtgtttatttacttgagctgttagaggcagtttctttgaattatacattgtattcaaagccttaaggcaccctaacttaaattcagaggacatacacttttgtccttttcttatactaaattgatcatggagacaagtgtacacagtggcattgtgtttatggtgtgtgattgaaggccatgatgaagttatatagttgatatttgaatgaccctaaaaacaaatttatcgcagaagtaaaaatacaatgaaaacaaccctatgtgttttattaacatgtggaactctacagcagtaattgctgatagtggtaaaatacttttggtttatcagagacagctttagaacacagggctgctacatgcctgcctcatcgatctggatgagtgctctaaaatcttcctgtgggatcaaacaggaggactccattctccagtgacctaactcttaagtgtggcccattcttaaaataatatttttcactggagtttggttgcttggaacactaaatggcttactccttgtaagacataatccaaaacctcctgtcagagatttatggaatttccacatacactcagcaagtgaaaaatttattctccaatgtatttctatgttacacatgatatagaaagctgcctggtctaaacttgcctgagttaaatttaaatgtatttgccagaataaaattccc
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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