LOCUS       NR_136900               1154 bp    RNA     linear   ROD 12-DEC-2023
DEFINITION  Mus musculus PRAME like 51 (Pramel51), transcript variant 3,
            non-coding RNA.
ACCESSION   NR_136900
VERSION     NR_136900.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1154)
  AUTHORS   Wan Y, Yang S, Li T, Cai Y, Wu X, Zhang M, Muhammad T, Huang T, Lv
            Y, Chan WY, Lu G, Li J, Sha QQ, Chen ZJ and Liu H.
  TITLE     LSM14B is essential for oocyte meiotic maturation by regulating
            maternal mRNA storage and clearance
  JOURNAL   Nucleic Acids Res 51 (21), 11652-11667 (2023)
   PUBMED   37889087
REFERENCE   2  (bases 1 to 1154)
  AUTHORS   Evsikov AV, Graber JH, Brockman JM, Hampl A, Holbrook AE, Singh P,
            Eppig JJ, Solter D and Knowles BB.
  TITLE     Cracking the egg: molecular dynamics and evolutionary aspects of
            the transition from the fully grown oocyte to embryo
  JOURNAL   Genes Dev 20 (19), 2713-2727 (2006)
   PUBMED   17015433
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CA560787.1, DV659507.1, AK139576.1 and CT030175.7.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DV659507.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374 [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-86                CA560787.1         1-86
            87-747              DV659507.1         1-661
            748-1146            AK139576.1         1072-1470
            1147-1154           CT030175.7         62474-62481
FEATURES             Location/Qualifiers
     source          1..1154
                     /organism="Mus musculus"
                     /mol_type="transcribed RNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="12"
                     /map="12 42.35 cM"
     gene            1..1154
                     /gene="Pramel51"
                     /gene_synonym="Gm10436"
                     /note="PRAME like 51"
                     /db_xref="GeneID:100039315"
                     /db_xref="MGI:MGI:3704393"
     misc_RNA        1..1154
                     /gene="Pramel51"
                     /gene_synonym="Gm10436"
                     /product="PRAME like 51, transcript variant 3"
                     /db_xref="GeneID:100039315"
                     /db_xref="MGI:MGI:3704393"
     exon            1..155
                     /gene="Pramel51"
                     /gene_synonym="Gm10436"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    51..158
                     /gene="Pramel51"
                     /gene_synonym="Gm10436"
                     /inference="COORDINATES:
                     alignment:Blast2seq::RefSeq|NM_001105254.1"
                     /note="primary ORF has stop codon >50 nucleotides from the
                     terminal splice site; nonsense-mediated decay (NMD)
                     candidate"
     exon            156..303
                     /gene="Pramel51"
                     /gene_synonym="Gm10436"
                     /inference="alignment:Splign:2.1.0"
     exon            304..1154
                     /gene="Pramel51"
                     /gene_synonym="Gm10436"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

tagctgggagggtgtggctacaaagggagggttcagctgaaaggtatataatgattcatagcaaggagaggaagtatagattaggtctcttggagcctggagtcacagctttcccttgcccgaatatggtgatctgtctccattgtccagatcagtaggtgcaaactcagagtaattaattggagagaagatgacttgaagatatgggctggatcccatgaaggtgaaggcttaccagatttcaggacagagaagcagccaattgagaacagtcctggctgtgaggtgaagaaagaattgaaggtgcctgaaaaagcccttggagacactttgcatcagtaactgtgacctctcacagtcagacttggattgcctgcccttttgcctgaatatttgtgaactcaaacatctgcatattagtgatatatatttatgtgatttactccttgagcctcttggttttctccttgagagagttggagataccctgaaaaccctggaattggtttcatgttgtatagtggactttcagttcagtgccttgctgcctgccctaagccaatgttctcacctcagagaggtcactttctatgataatgatgtttctctgcctttcttgaaacaacttctacaccacacagccctgctgagtcagctgatctatgagtgttaccctgcccctatagagtgctatgatgacagtggtgtaatactaacacacagattagaaagtttttgtcctgagctcctggatatactgagagccaaaagacagctccatagtgtctcctttcaaacaaccaaatgctctaaatgtggtgggtgctacatttatgatcggcatacccaatgttgccgttttgtggaactatgataagcttgattgtgaaactgagaaatagaaacttagtattggggactgatgaaatcctaagtgaatgtccactgctaaatggagcatgaaaatgtcaatcacctaaaagtctgagatacacgggaaagtcaataacttcctctgagctggtgaatggatgttgcatctgtagaaagaatcaagcacttgtagtttgaatgtgttacaatagaagcaccattttatgagactggcccaatctgttgactgcatacaataaatatgttgacttttttttttt

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