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2024-04-20 02:18:45, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       NR_108059               2329 bp    RNA     linear   ROD 04-AUG-2023
DEFINITION  Mus musculus RIKEN cDNA 4930463O16 gene (4930463O16Rik), long
            non-coding RNA.
ACCESSION   NR_108059 XR_380640 XR_393094
VERSION     NR_108059.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2329)
  AUTHORS   Chadourne M, Poumerol E, Jouneau L, Passet B, Castille J, Sellem E,
            Pailhoux E and Mandon-Pepin B.
  TITLE     Structural and Functional Characterization of a Testicular Long
            Non-coding RNA (4930463O16Rik) Identified in the Meiotic Arrest of
            the Mouse Topaz1-/- Testes
  JOURNAL   Front Cell Dev Biol 9, 700290 (2021)
   PUBMED   34277642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2329)
  AUTHORS   Harrow JL, Steward CA, Frankish A, Gilbert JG, Gonzalez JM,
            Loveland JE, Mudge J, Sheppard D, Thomas M, Trevanion S and Wilming
            LG.
  TITLE     The Vertebrate Genome Annotation browser 10 years on
  JOURNAL   Nucleic Acids Res 42 (Database issue), D771-D779 (2014)
   PUBMED   24316575
COMMENT     PREDICTED REFSEQ: This record has not been reviewed and the
            function is unknown. The reference sequence was derived from
            AK015500.1 and AK086567.1.
            
            On or before Apr 18, 2014 this sequence version replaced
            XR_380640.1, XR_393094.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK015500.1, SRR5189685.118766.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384 [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1923              AK015500.1         1-1923
            1924-2329           AK086567.1         1-406               c
FEATURES             Location/Qualifiers
     source          1..2329
                     /organism="Mus musculus"
                     /mol_type="transcribed RNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 41.49 cM"
     gene            1..2329
                     /gene="4930463O16Rik"
                     /note="RIKEN cDNA 4930463O16 gene"
                     /db_xref="GeneID:75804"
                     /db_xref="MGI:MGI:1923054"
     ncRNA           1..2329
                     /ncRNA_class="lncRNA"
                     /gene="4930463O16Rik"
                     /product="RIKEN cDNA 4930463O16 gene"
                     /db_xref="GeneID:75804"
                     /db_xref="MGI:MGI:1923054"
     exon            1..889
                     /gene="4930463O16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            890..1290
                     /gene="4930463O16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1291..1423
                     /gene="4930463O16Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1424..2329
                     /gene="4930463O16Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
ggaaacataggtaacaacctcatgtacatttctccacgccctgtattcttccctcccagtaaatctcttttatgatgtttgctgcctgatgtgactctctcatcagaagaagccaagaagcaatgaagcaaagaagggtagatgggagcaggctgaggctccggagctcagctggggatacgtcccctgggacctgcagtgtagaagaggagccgctagggggagctgataacagtgtagcactccagttgaccaaccatatcctccataagggctgcaagccctctgctaaggtttcctctcagagttgtgtggttcctgggctcccacgtctcagaatgtccttcctttgcgacattgtcccacctcagagctgtgtatgttcctgggctcccaagtcccaggataactttccactgagcagaaacaccaacagttgttatgcccagtgctcgggaaccccagaagaatgccaggaagtacaagtccgatgttaaagagactcagagcaaagtctttcccactgtgcaggttagggatgtgatgcccgcatccaggggcttggagtatatatacacgtgcatattcataggcagagctcctcgaactttggggttacgtgactggggaggtgatgagggaaagctatccttcaaacccgataacgtttgttcagggcaaaaccatgcagctgggagggggaccctcctgacctgggaagtaactttatggagctatcaggagctagtgtatttttacatactggttgcagctgtctgggaacacttaattgcccttccttcatggtccaagcatgggccttttatcatttcaaggatgtttggtccttgttcccttcaagggcaggagccttctgcacctgagaaaggtttctggatccagctgaagagctctatcattccatcaaaaccatgagaactgcctgagctaacactgactgctacttgaatcttgtgagaagcctgagacagaagggcagccacactctgggtacccagctgtgccactctgaattctagagtgtctttaacctagcggacttggtagtcactcaggttatagcaagagacagctgatttatgatagcttcaagtgtggtgtgccggctatcttgattgtcagctcggcgggagtttagaactacctaggagataagctcaagtgtgtctgtgaagatggttccagaggtgaaactaaggaatggaaacatgaaagtgggtgacaccccacacacactgggctcccagactgatggaagaaaaggaaaagattcatggggtcagcctgcaagaaatccatttgcataagagaccagaaataagccaccttacagagggagatgctcaagcaggcatgacgaattatagatgacctcagtcttaggcactgccctcattgagagctctaaagctctgagattctagggcagaaatacagaaaggaagccatcttgctcagggagggagaactcacttccagattctgagggctttattcattcttggcaccaccaccaacaacaaccaccatcttttaagagctgacagaatccaagctctgcagagcctctaggctgacaccccaagtggtgggagcccaagagtacagctcaggctactgttattttccaagcctgcctcagagacctggtcttaaaaggaggcaattttcacacaaatcagacggcattctcattaaaataatgagttgcaagaataacagcttcccagggccattatctacaaaccctccaggctaacctggcagctttggcgaaagtccctgcagttgcaaccactgatgcctgtgatggagaaagaagaataaggaatccagatggaagaggtctgtccgtgcttgcagcacagcccctcctggttttgttggagatcttgccccgtggaaccacatggcagaccactcacgtttcccagtctggtttggatcaaccacggcttctcctgatgccttcttaccggccaggtgcagtgctaaagtgggcacagtgacagcaagggagaggcccagaggaaaaagactcggagcatgcaatttgggtttattttgaaaaaaaaaaaaaaaaaaaaaacaaaggccatgatgttaaactaaataatatccataaagggcctctagtgcctgggacctggcacgagattcaatgctctggaggtaagcggcccccccttccttctgcaaatcacagcaacaccagtagagatgctagctttggcaatgcctcctcccagaatgcacttgatctgctgttgagcaaatgctcagattttcaacttctgtatttactgtc
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]