LOCUS       NR_102311                920 bp    RNA     linear   ROD 06-AUG-2023
DEFINITION  Mus musculus RIKEN cDNA D630024D03 gene (D630024D03Rik), transcript
            variant 2, long non-coding RNA.
ACCESSION   NR_102311
VERSION     NR_102311.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 920)
  AUTHORS   Aboudehen K, Farahani S, Kanchwala M, Chan SC, Avdulov S, Mickelson
            A, Lee D, Gearhart MD, Patel V, Xing C and Igarashi P.
  TITLE     Long noncoding RNA Hoxb3os is dysregulated in autosomal dominant
            polycystic kidney disease and regulates mTOR signaling
  JOURNAL   J Biol Chem 293 (24), 9388-9398 (2018)
   PUBMED   29716997
REFERENCE   2  (bases 1 to 920)
  AUTHORS   Alvarez-Dominguez JR, Zhang X and Hu W.
  TITLE     Widespread and dynamic translational control of red blood cell
            development
  JOURNAL   Blood 129 (5), 619-629 (2017)
   PUBMED   27899360
REFERENCE   3  (bases 1 to 920)
  AUTHORS   Alvarez-Dominguez JR, Hu W, Yuan B, Shi J, Park SS, Gromatzky AA,
            van Oudenaarden A and Lodish HF.
  TITLE     Global discovery of erythroid long noncoding RNAs reveals novel
            regulators of red cell maturation
  JOURNAL   Blood 123 (4), 570-581 (2014)
   PUBMED   24200680
REFERENCE   4  (bases 1 to 920)
  AUTHORS   Harrow JL, Steward CA, Frankish A, Gilbert JG, Gonzalez JM,
            Loveland JE, Mudge J, Sheppard D, Thomas M, Trevanion S and Wilming
            LG.
  TITLE     The Vertebrate Genome Annotation browser 10 years on
  JOURNAL   Nucleic Acids Res 42 (Database issue), D771-D779 (2014)
   PUBMED   24316575
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK158188.1, AK085420.1 and AL662793.10.
            
            Transcript Variant: This variant (2) uses an alternate splice site,
            compared to variant 1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK158233.1, BY753017.1 [ECO:0000332]
            RNAseq introns              :: partial sample support SAMN00849385,
                                           SAMN00849386 [ECO:0000350]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-64                AK158188.1         2-65
            65-255              AK085420.1         43-233
            256-420             AL662793.10        72238-72402         c
            421-511             AL662793.10        67418-67508         c
            512-920             AL662793.10        66890-67298         c
FEATURES             Location/Qualifiers
     source          1..920
                     /organism="Mus musculus"
                     /mol_type="transcribed RNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 18.62 cM"
     gene            1..920
                     /gene="D630024D03Rik"
                     /note="RIKEN cDNA D630024D03 gene"
                     /db_xref="GeneID:414116"
                     /db_xref="MGI:MGI:3041224"
     ncRNA           1..920
                     /ncRNA_class="lncRNA"
                     /gene="D630024D03Rik"
                     /product="RIKEN cDNA D630024D03 gene, transcript variant
                     2"
                     /db_xref="GeneID:414116"
                     /db_xref="MGI:MGI:3041224"
     exon            1..255
                     /gene="D630024D03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            256..420
                     /gene="D630024D03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            421..511
                     /gene="D630024D03Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            512..920
                     /gene="D630024D03Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

agggagtgcgacctcgctgctgagttagcctggctcttgagccgggctgatagaaactcccccaatccccacttgtttctgtgtttagggtttggcaaactggtgttttcactctcaggggctagctccatttgtctggccacttttctgactacagtgctgggtactgcacctttacaacaaggctgtgagggctgagcactcagaggcagaggctgggggatccctgagttcaaggctacccagggctacgcattccaactcatcttcagctctactgaaagctgacagctcagtcttgaaaacccaaagctctgctcctgctatcaggaggattcctgcatccatttattgtatcctccattccagactggactcctaaaccatgccacgccctatctgggcaccagggctaacaagatgcagaactctccgctctctccagcaccatgtctgcttgcacgctgccatgcttctccccatggtgataatggactgaacctctgaaactggcccaagaggacattcagtcccaagacgtgttcatgggcaaagcttgccaatgttgcaagaagcggctgctgtaagcaggcaggctgcagacctttgcacacggcactgcctctcataggcaggcaacttaagtgctcactgcctatgggaagctgtgctgtgctgtctggagctggctgaggcaaggcacgtgagcttgagtggagcacgtgcagggccactgtcattatggaaatcctgactctgaaggctaattctgcgtctaaatgagttgaaatgaaatgcaaagaacacatccatcactccagttcacccttgttcagcctcgcatctcattactgtgctactctgcctatgtattatgaattaatatatttaataaattctgtaattatcttgtgaacagt

//